conserved hypothetical protein, snap_masked-scaffold871_size86487-processed-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000008615 (supercontig:LSalAtl2s:LSalAtl2s530:668249:677636:1 gene:EMLSAG00000008615 transcript:EMLSAT00000008615 description:"maker-LSalAtl2s530-augustus-gene-6.16") HSP 1 Score: 296.975 bits (759), Expect = 8.033e-81 Identity = 232/813 (28.54%), Postives = 394/813 (48.46%), Query Frame = 0 Query: 1527 PIRVKARLEELEMTEVQFHELLPIYDKARHEYIETLKRGYLAFFPFILGSMWKQKHPNHI-----VAGRKLTIVVEMYIEE--RSKGEIHTP-EYLTKNPCHFKMTEQVLRQILTLFNECERDLEEDESEAPEEAMVYAELCQRWMSRYPNMKLTNKQLVSIHQLLGFDPQRSEATPETI---CTLVDIWRTIEKHEAKSEAFESECMDDDEAPSRLGDEDDLLTYDPDTLSIDQKQEWLIETQAL--REARDHPGPRPRFVGKNVRLYWTQTRIQALSLCRLRAIHRFRGYPRRKRHQTSIR--DLMVAEFRHMYPDCELSAAQIVGKCAREIRVAKKAEKRDLDMIIDYWAQECDEFAQNEDLIEVIESAGMDNSCFDMDDDLSGGQFVQEINGKLTSLSKISSLKLAGNVTRNFNNDEDVLDYIKEVQNLGKGGHAITWTPDVIRDLMKARGNAREQKRSWEQWATKEYGGVGYAYNNPEVKFKKVDDMFLEEWRKLRPNFAHLSIWTLVAYARKYDNLKKQLILDNNQGDLHSSSSSPTPQALKYSAVFFKDSLVPKFDLAILERLPEIDERTKDLFRTRQLAKEKEESEEFKFTLPFLWGDEWRKLH-PESPESGLKLQRELYCWESHDQNLDLLKPALLKSEPTLDESSGCLFQPGDLPRVLPRYPVYP-ELVGQNHFNIECRTKAPHDPK---------SRLPQEECLVRFHRDIFMEIHHHLDLPAV---ERMEVEKDDH--------DTKEDEMLIHPRRRPVDSQA---LAPLHHED--PLQCPTCGARYDNANNTFYHLQMH 2297 P RV+ RL+EL+++ FH+LL Y AR EYI L RGYLAFFPF L +W ++ + V GR LT ++EM++EE + E P E++T PC F +TE L+Q+++ F E + + E ++ Y + W + +P + + K+LVS+H++L F+ + E + C + +IW K E S ++ M+ S YD +S++Q +EW T+ L RP F KN++L+W+ RIQ L+ C +A RF+ +RK +Q I +L+ E+R ++P+ +L + ++GK +R KK ++ I W + F ++E+ +IES + + L G N + + S + + E+VL I E KG ++ WT DV+RDL+KAR +R +K+ ++ +V+ +KVD++FLEEW+K+RP +HLSIWTL AY RK+D K + I+++ Q +S + AL +F ++ +P +D+A++ L E+ + KDL TRQ A E + ++ +TL +LW EW+K++ + P + LK +L+ E N++ L+ AL + T + Q +LPR ++P E + + F + + HD SR + +V ++ L++P V +++E +DDH + + + P+R ++ A L +++ C CG ++ N NN YH+ MH Sbjct: 1329 PSRVENRLQELDLSAKDFHDLLSCYTIAREEYINYLNRGYLAFFPFALQVIWFRQKKDSASNYPKVNGRNLTGLIEMFLEEFYSCRSENFPPLEFITTVPCKFNVTELTLKQVISCFAEA---ISNSKLEYSKDVNAY----ESWKNLHPKINFSFKELVSLHRMLIFESNQDIDLLENLTLDCAISEIWFQFAKPEDVSS--KNNIMELKPCTSE---------YDESNISMEQHKEWYFRTKFLPYSTTTSISKLRPHFKVKNIKLFWSNDRIQDLNYCYQKAEFRFKLLKQRKHYQKKISFLNLIHLEWRKLHPELKLDSRILIGKYISHLRRRKKENNSRENIQIQEWNLDVHNFIRSENKT-IIESTS------ESEYHLPGNPIPDFDNNYKDDMEESSKVTI-----------EEVLRRIDE-----KGKRSVVWTSDVMRDLLKAREESRRKKKDIDK----------------DVRLQKVDNLFLEEWKKVRPKLSHLSIWTLNAYVRKFDQFKNK-IMNSKQLKKTENSGIKSNTAL---VKYFPNTCIPVYDIALVRSLSEVSKEVKDLIFTRQRAMEVKVIDKSNYTLDYLWPIEWKKIYGVDVPANHLK--NKLWSVERFPANMERLQVALYRGNLTYETIHHPCVQNDSYMPILPRRYIFPEEQIIRTPFRFSHKL-SFHDSSFGANGIRHVSRKRNIQNVVSLCSELSNHKEMSLEIPKVKFEKQIEAIQDDHCQGLYTERGCELYSVKLQPKRTKMNVPAASGFCSLSYDNSGAFFCNECGKKFRNINNYKYHVYMH 2077 HSP 2 Score: 280.411 bits (716), Expect = 8.161e-76 Identity = 209/657 (31.81%), Postives = 310/657 (47.18%), Query Frame = 0 Query: 631 NEETSGIEGFEGWTLHMIRDFIACMDTARRKYAILKE---NDPDGSIKLVPLLLEEWKRIHQDSPETVGSFLVKIKHLKSQKDVIKKHLGQSGLLPKVENGGGSQSKSVTHFRSGPNGE--FKWNKEMIDDVIQARKKALASKNEAAAQGMKLSFHQLWSDEFKKIYPNSTFTSNNLSVHFWSWRKQQQRLGKVDPLYDEKLSLADSSRPMPSNGAKLAPLPSHWSAEELTELLELGKSLQLRMRASDASNIMKSKGFPALLHSEWRRKHPGVVESPRALNQLFQGLTKQA----GKI----SQHRQSKTVAKTKWKPKFNSALRQCIQLLDP--ENPSFVASVMENWRSTFPHATINDEDLFQRIKDITPTNCSEIPSRLMSRSSSVDGPLGLDHIRAPNARGQMCWNKQTIRDLFQAHQMGLHRRKELLQSMSKKDAPLLSSLVLEEFLKLHPYCKLSPSILMAKCYCWKNAVNKGTLDIHVDDPEASKVIRMGDSEREMEYPIQRTGRSEIESSERIENNSSHIAYRSWTKDKIDDLLKTRKKAQGLKKLG---EMRSVLDIWYSEFSQLYPNFSCTKKNLLRKFKWYRSRVARGEATRGHIKEALQAAEDAKGHSH----AMAIRKDVALHIKKLMEEARIFLPTKLPKEAEL 1265 NE + GF W+L MIRDFIACMD ARRKYA LK+ + +L+PLL+ EWK I+ +S ET +FL KIKHLK QK+ IKK+L QSGLLP+ E N E F WNK MI+DVI+ R AL E +G K+SFH W +EFKKIYPN +F N+LS H+W W+K Q + K + +D N ++W+ E+ +LL+L LQ D +K+KGF A+L EW+ P + P LN L+ K+ KI S+ R K + T W P+ N LRQCI + + S+ + + W+ FP+++++ +D+ +R+ D+ ++ +S P ++ A R R + +M RK+L+ KK L+S + + F+K C L PS L+ + +++ V+ L ENN S Y+ WT I+++++TRK A +KK E + +W+ EF +L+P TK+NL+RK+KWY+S + + L D+ + IRKD LHIK L++E++ LP LP +L Sbjct: 686 NEVMPQVVGFPNWSLAMIRDFIACMDVARRKYASLKDESISTKQNQPRLIPLLINEWKEIYPESSETDKTFLEKIKHLKVQKETIKKYLSQSGLLPRRETPNEE-----VKIEPQENNEEKFYWNKSMIEDVIKTRDSALKRLGEVQTKGKKVSFHHTWWEEFKKIYPNCSFGKNSLSAHYWKWKKTQNHIDK------KMCHKSDQGFLCAKNNLPPKKAYTNWTKEDKEQLLDLAFKLQNNTDQED----LKTKGFGAVLRDEWKLLRPDRGDHPSTLNLLYAKYLKEVKVDTDKIEANNSKERSGKLLVST-WTPEHNRVLRQCIIEFEDRINDESYFNDIFQLWKGLFPNSSLSYKDVEERMFDLR--------ENVVVNTSWNFTPEARKNLNAIFTR--------VFRQTLKKRRM----RKDLIIVPEKKLE--LASNLHKAFIKKFQDCPLIPSALLNEVDMFRSKVSANVL----------------------------------------ENNES---YKIWTPLMINNMIETRKIALQMKKASPNPEFFNFSQVWHQEFVKLHPECPSTKRNLVRKYKWYKSETEQSMPIKK--DNCLNTFRDSYISDQVSIPSKYIRKDFLLHIKSLLQESQTSLPPLLPPRNQL 1259 HSP 3 Score: 256.914 bits (655), Expect = 1.125e-68 Identity = 181/601 (30.12%), Postives = 281/601 (46.76%), Query Frame = 0 Query: 16 WTPDALEHLRLCRNRAYAKVNNKKRQHLPASMSGYLQREWMTSYPGGIKLSGKLLLDVYQAHYEQPEKDKRRRVHPGRGRRRGGGAAGARSSPAPVSTISRVPVEGLDGPMPDEQEDHSDKQWSEAMLENLLACGERANEKLEEGSPADMSLLLSEEWKRINPNSSLSGRSLKARLTVYQGTRSEQPPSPKKRRMEDE------------------------DSLSS---------------------DLPMAAESSYSTDTLNGGETHVVPASGNGMEDIQDEFAPSEASSS---SAPIPSEAK-MCKKHIIHMFKDSDDSISCILTEQMLQIRRGLKPSFPGCDLH---HPKKPK--GFSGMMLKEWKGYYPKSDENIKSVTVKFSKY-------DTAAFELRKTVTSGEDG--------------SIDWTQEMLENLKMTRDYAENKC--GLDATSHM--ITRHWKKEWKSIYPHLDADWRTIVHKYQTKFGSFTTPQTEGGHRSGFSVSNSRTSAKV----EDIDEKVKGFRNWTSRAKQDLLRTKNRVVQE-HP-GVEPGCSQFNRLLLQAFTKIHPKCMESARSIFSKVQSIEKE 531 W + E LRLCR RAY KV +K+R HLPA +S +L REW++ +P K+ + LLD+Y+ +E G +RR + I V QW+ + L +L G++ +E L E D + L EEW + P+S+L+GR+LKARL +Y TR + K+ M ++ DSLS + + E + DT ++ + + I++ F PS S S P+P ++ C H +H+F+DS + C LTE +L IR LK +P CD+ + K+P+ G G +L EW +P++ ++++S+ + KY D ++ E R S ++G +DWT EML +LK TR+YAE K ++ T + +T+ WK WKSIYP L+ DW+ +V KY ++F +++ + + +S + V E D +VKGFR W + KQ L+ TK ++++ +P ++ QF LL F K PKCMES RS+ SK+QSIEKE Sbjct: 64 WNENLYETLRLCRKRAYCKVQSKRRLHLPACLSVFLHREWISLHPE-YKIKPRDLLDIYETRFE------------GGSKRRKPYVKKTKKVLTAAKEIKSV-------------------QWTPSTLMHLSLIGQKVDELLVENPHLDYTSKLREEWLQYYPDSTLTGRNLKARLFLYNKTRPDNASHSKRNDMWNKQAIDLLVNIYKQLSLDEKCSSKLGDSLSHHWRKEYKGLLGVTSQSLMTKIEELLEKEPNLFLDTCPQNGELIITEAPSASNSIEESFRPSSTSPSLDNRIPLPPKSDWACNTHWVHIFEDSSYELDCCLTEDLLNIRNNLKDFYPNCDIFEKPYLKQPRKAGLVGAILNEWNKIHPRNSDSVRSLVSRLYKYDRIPEMNDMSSLENRSKYKSYQNGECKSQEFTESKDYEDLDWTDEMLCHLKETREYAEMKAEENVNRTPSLQAVTKIWKNRWKSIYPDLNFDWKDVVEKYNSQF-CYSSSISTDEMSNVLKISRLKCETSVLPVGESGDSEVKGFRQWNATMKQGLINTKEKIMRALYPKTIDLQSKQFATLLFNEFRKSFPKCMESTRSLLSKLQSIEKE 631
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325328856|ref|XP_023346286.1| (uncharacterized protein LOC111715215 [Eurytemora affinis]) HSP 1 Score: 299.671 bits (766), Expect = 5.184e-78 Identity = 203/649 (31.28%), Postives = 319/649 (49.15%), Query Frame = 0 Query: 634 TSGIEGFEGWTLHMIRDFIACMDTARRKYAILKENDPDGSIKLVPLLLEEWKRIHQDSPETVGSFLVKIKHLKSQKDVIKKHLGQSGLLPKVENGGGSQSKSVTHFRSGPNGE------FKWNKE-MIDDVIQARKKALASKNEAAAQGMKLSFHQLWSDEFKKIYPNSTFTSNNLSVHFWSWRKQQQRLGKVDPLYDEKLSLADSSRPMPSNGAKLAP-LPSHWSAEELTELLELGKSLQLRMRASDASNIMKSKGFPALLHSEWRRKHPGVVESPRALNQLFQGLTKQAGKISQHRQSKTVAKTKWKPKFNSALRQCIQLLDPENPSFVASVMENWRSTFPHATINDEDLFQRIKD--ITPTNCSEI---PSRLMSRSSSV-----DGPLGLDHIRAPNARGQMCWNKQTIRDLFQAHQMGLHRRKELLQSMSKKDAPLLSSLVLEEFLKLHPYCKLSPSILMAKCYCWKNAVNKGTLDIHVDDPEASKVIRMGDSEREMEYPIQRTGRSEIESSERIENNSSHIAYRSWTKDKIDDLLKTRKKAQGLKKLGEMRS----VLDIWYSEFSQLYPNFSCTKKNLLRKFKWYRSRVARGEATRGHIKEALQAAEDAKGHSHAMAIRKDVALHIKKLMEEARIFLPTKLP 1260 +S I+GF W+L M+RDFI+CMD ARRKY +K DP +KLVPLLL EW ++ + ETV SFLV+I+ LKS K++IK LGQ LLPK+ +Q VT + E F W+ + M+ DVI R KA+A + QG K+S+ +LW EFKKIYP T+T+NNLSVHFW W ++ N + P LP W+ E L +L + + ++ +M+ S ++S GF LLHSEW +PG ESP L L + L + ++++ W PK N +LR L +N ++ ++E WRS P E + R+ D I+P + P R++ R V D P+ + + NARGQM W +Q + DL QAH++ + S +K L++++ EF K +P C + P++L+ KCY +++ + G L +Q TG S +EN S R+W+ + +++L R++A K++ ++ + + D+W EF +PN+ +KK L++K+KW+R++ +++ H + + L IK ++E + LP +P Sbjct: 838 SSDIDGFTDWSLGMVRDFISCMDKARRKYTQMKVEDP--GMKLVPLLLAEWMSLYPSTTETVKSFLVRIRFLKSNKEMIKLRLGQHNLLPKMSQQP-NQENVVTEVKVKERTEDSTQDKFIWDSQAMMPDVIATRAKAIAIQGRELEQGRKVSYSKLWIREFKKIYPACTYTANNLSVHFWYWNNRE-------------------------NTERRGPKLPDFWTEERLAQLANIAEMVENKMKNPGTSMSVRSVGFAPLLHSEWSNLYPGSKESPAQLEALIRRL--------ETKETQPDIILPWSPKLNQSLRLLASRLIDKNEYLMSRLLEEWRSLNPGRRDGVEFILDRLDDANISPPVIDRLAKKPVRIVPRIEPVKIFAPDPPVIANCL---NARGQMRWTQQAVTDLLQAHKLA-------VASKNKHPDTKLATILHTEFKKKYPSCPVGPNVLLTKCYIFRSEIKSGKLV------------------------MQNTGDV---GSTILENIS-----RNWSVEMLNELGPARRRAVYRKRIFQLNNQSIQLGDLWLEEFKLKFPNYKASKKQLIKKYKWWRTK------------------QNSSMPEH-FEVSGQLYLEIKGILEGRNLILPPDIP 1389 HSP 2 Score: 207.994 bits (528), Expect = 7.192e-50 Identity = 127/418 (30.38%), Postives = 212/418 (50.72%), Query Frame = 0 Query: 138 WSEAMLENLLACGERANEKLEEGSPADMSLLLSEEWKRINPNSS-LSGRSLKARLTVYQGTRSEQPPSPKKRRMEDEDSLSSDLPMAAESSYSTDTLNGGETHVVPASGNGMEDIQDEFAPS----------------------EASSSSAPIPSEAKMCKKHIIHMFKDSDD-SISCILTEQMLQIRRGLKPSFPGCDLHHP-KKPKGFSGMMLKEWKGYYPKSDENIKSVTVKFSKYDTAAFEL-RKTVTSGEDGSIDWTQEMLENLKMTRDYAENKCGLDATSHMITRHWKKEWKSIYPHLDADWRTIVHKYQTKFGSFTTPQTEGGHRS---GFSVSNSRTSAKVEDIDEKVKGFRNWTSRAKQDLLRTKNRVVQEHPGVEPGCSQFNRLLLQAFTKIHPKCMESARSIFSKVQ 526 W+E+M+E++ +A ++L +S E W + NPN + ++ +L +R + R + S + + S + D NG +V G +ED + P E +P +C+ H IH+F D ++ S CILT+Q+LQ+R L P FPG D++ P KKP GF+ ++L EWK +YP S EN K++++K +YD A L R TV+ G G I+WT M+E+++ TR+ AE + G ++ +TR W++ W+ +YP+++ +W+ IV ++Q FG+ +G + + R VED E +KGFR W ++DLL ++ + +E P ++ +F++ LL AF + HP CMES RS+ SK++ Sbjct: 394 WTESMIEDMFETRTKAVQELNTEINNVLSRRWHELWLQKNPNHNFITKENLYSRYLYHSKKRINSIGGGGMVYAQQNSESSLNALLGTHSRF--DEQNGHFENVSTPGGGIIEDPEYFSVPGADPIIDPVPELPVAPGAKYICKEVPKEYPNLPKSKWICEHHYIHVFYDDENKSYECILTDQLLQMRNSLVPKFPGLDIYKPGKKPPGFAKLLLNEWKRHYPGSQENNKTISMKIGRYDRAPQILSRDTVSEG--GRINWTPNMIEHIRSTREKAEVEVGPTGSAVELTRVWRENWEQLYPNINIEWKHIVSRFQYHFGAERRDSLDGADQKLDKSTPIPRPRVGNGVEDEMEDIKGFRQWNRSMQEDLLILRDLIFEEEPDIDQSSKEFSQKLLGAFQRRHPSCMESGRSLLSKLR 807 HSP 3 Score: 96.6709 bits (239), Expect = 6.393e-16 Identity = 80/242 (33.06%), Postives = 118/242 (48.76%), Query Frame = 0 Query: 9 QSGDAFEWTPDALEHLRLCRNRAYAKVNNKKRQHLPASMSGYLQREWMTSYPGGIKLSGKLLLDVYQAHYEQPEKDKRRRVHPGRGRRRGGGAAGARSSPAPVSTISR--VPVEGLDGPMPD-------------EQEDHSDKQWSEAMLENL---LACGERANEKLEEGSPADMSLLLSEEWKRINPNSSLSGRSLKARLTVYQGTRSEQPPSPKKRRMEDEDSLSSDLPMAAESSYSTDT 232 Q +F+ + +LRLCRN+A++KV KKR HL AS+S L +EW YP LSGK L+++Y++ +++P K+ P R+ SP +S + + P + D DHSD+QWS AML NL + G++ LE EWK + PNS+L+ R+LK+R TV++ T S P P E E S S+ + + S+STDT Sbjct: 140 QEKISFQLNEEETNYLRLCRNKAHSKVLQKKRHHLNASLSSLLLKEWQLIYPSS-SLSGKELVELYESIFKKP--PKKVEPFPSLKRKLSINQTENNGSPVIISLLKKKSSPTANAEPEANDCSALTPPETSGVISLSDHSDRQWSAAMLSNLHYSVRMGKKKGTDLE------------TEWKILYPNSTLTARNLKSRFTVHERTHSGLVP-PAAPVAEVESS-STPSKLTFKRSWSTDT 364
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325328854|ref|XP_023346285.1| (uncharacterized protein LOC111715214 [Eurytemora affinis]) HSP 1 Score: 125.561 bits (314), Expect = 1.024e-26 Identity = 79/255 (30.98%), Postives = 131/255 (51.37%), Query Frame = 0 Query: 1952 TWTPDVIRDLMKARGNAREQKRSWEQWATKEYGGVGYAYNNPEVKFKKVDDMFLEEWRKLRPNFAHLSIWTLVAYARKYDNLKKQLILDNNQGDLHSSSSSPTPQALKYSAVFFKDSL----VPKFDLAILERLPEIDERTKDLFRTRQLAKEKEESEEFKFTLPFLWGDEWRKLHPESPESGLKLQRELYCWESHDQNLDLLKPALLKSEPTLDESSGCLFQPGDLPRVLPRYPVYPELVGQNHFNIECRTKAP 2202 W + L+KA+GNA+ +++ WE WA K++G + AY+NP VK K++D+ +EEW RPN A +S WTL Y RK++ LK+ LI + + + L+ + V D +P+FDL L+ + ++ + K L +TRQ AK ++E E + LW +E+ P SG +LQ LY + LK A++ P + + +LP +LPR ++PE+ + ++E + P Sbjct: 4 VWNSTTLSVLIKAKGNAKLRRQEWEAWAIKKHGSLQSAYSNPRVKVPKLEDLLVEEWSLARPNQAGISAWTLNTYIRKFEQLKQDLIKEQEEEKRQ--------RMLRAAPVMIPDCFPGSDIPRFDLKKLQDIKKLPQEVKQLIKTRQRAKTRQEVEGSRLNYLELWREEFSAQVPTWRGSGHQLQIRLYELQCIPSIRRRLKSAIIMISPRNPKLEVTKLE--ELPVLLPRVTLFPEV---DDISVEATVRRP 245 The following BLAST results are available for this feature:
BLAST of conserved hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of conserved hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of conserved hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold871_size86487:57907..67507- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold871_size86487-processed-gene-0.14 ID=snap_masked-scaffold871_size86487-processed-gene-0.14|Name=conserved hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=9601bp|location=Sequence derived from alignment at scaffold871_size86487:57907..67507- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'conserved hypothetical protein' has the following synonyms
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