hypothetical protein PHACADRAFT_156102, snap_masked-scaffold871_size86487-processed-gene-0.16 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein PHACADRAFT_156102
Unique Namesnap_masked-scaffold871_size86487-processed-gene-0.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. L. salmonis genes
Match: EMLSAG00000004878 (supercontig:LSalAtl2s:LSalAtl2s256:83335:98605:1 gene:EMLSAG00000004878 transcript:EMLSAT00000004878 description:"maker-LSalAtl2s256-augustus-gene-1.8")

HSP 1 Score: 101.679 bits (252), Expect = 2.557e-26
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 0 
Query:    9 AHAQEVLRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
             +   VLR NK E RLAD+AF  IC   ND++V VRE AA L+G    VSQ  LEQTLDKKLMSN+R+K++AHERE+K+VS+GE   GR   D
Sbjct: 1090 VYPDHVLR-NKEELRLADDAFSKICEGFNDVNVHVRELAASLIGNNARVSQLFLEQTLDKKLMSNMRLKKSAHEREAKMVSAGEWSSGRNWAD 1181
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|74948983|sp|Q9W3E1.1|INT4_DROME (RecName: Full=Integrator complex subunit 4)

HSP 1 Score: 88.1965 bits (217), Expect = 3.733e-20
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:   18 NKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
             + E R+ D AF  +C A+ DLS+++R  AA+L+G M  VS+  L QTLDKKLMSNLR KRTAHER ++LV+SGE   G++  D
Sbjct:  330 QQEELRMIDAAFSKVCEALCDLSLQIRVLAAELLGGMTAVSREFLHQTLDKKLMSNLRRKRTAHERGARLVASGEWSSGKRWAD 413
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|118572560|sp|Q96HW7.2|INT4_HUMAN (RecName: Full=Integrator complex subunit 4; Short=Int4)

HSP 1 Score: 87.4261 bits (215), Expect = 7.043e-20
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  IC+ ++D S  VR +AA L+G M+ VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:  270 IPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGD 356
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|81900516|sp|Q8CIM8.1|INT4_MOUSE (RecName: Full=Integrator complex subunit 4; Short=Int4)

HSP 1 Score: 87.0409 bits (214), Expect = 8.386e-20
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  IC+ ++D S  VR +AA L+G M+ VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:  271 IPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGD 357
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|121945667|sp|Q2T9F4.1|IN4L2_HUMAN (RecName: Full=Integrator complex subunit 4-like protein 2 [Homo sapiens])

HSP 1 Score: 85.1149 bits (209), Expect = 2.877e-19
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  IC+ ++D S  V  +AA L+G M+ VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:   60 IPSSNEEIRLVDDAFGKICHMVSDGSWVVHVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWED 146
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|74724241|sp|Q96LV5.1|IN4L1_HUMAN (RecName: Full=Integrator complex subunit 4-like protein 1 [Homo sapiens])

HSP 1 Score: 85.1149 bits (209), Expect = 3.612e-19
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  IC+ + D S  V  +AA L+G M+ VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:   60 IPSSNEEIRLVDDAFGKICHMVGDGSWVVHVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWED 146
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Match: gi|82181815|sp|Q68F70.1|INT4_XENLA (RecName: Full=Integrator complex subunit 4; Short=Int4)

HSP 1 Score: 82.4185 bits (202), Expect = 4.088e-18
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  +C+ ++D S  VR +A  L+G M  VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:  272 IPSSNEEIRLVDDAFGKVCHMVSDGSWVVRVQACKLLGSMLQVSPHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGD 358
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|1059383349|ref|XP_017786488.1| (PREDICTED: integrator complex subunit 4 [Nicrophorus vespilloides])

HSP 1 Score: 95.1301 bits (235), Expect = 4.006e-20
Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 0 
Query:   14 VLRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            VL +++ E RL D+AF  ICN++NDLS+ VR  AA L+G M  VS R L QTLDKKLMSN+R KRTAHE + + V+SGE   G+K  D
Sbjct:  272 VLPDSEQEIRLIDDAFAKICNSVNDLSMHVRTHAAKLLGSMKLVSMRFLNQTLDKKLMSNMRRKRTAHELQWENVTSGEWASGKKWAD 359
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|919073925|ref|XP_013418163.1| (integrator complex subunit 4-like isoform X2 [Lingula anatina])

HSP 1 Score: 94.7449 bits (234), Expect = 5.538e-20
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0 
Query:    2 IKKEWKDAH----AQEVLRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +K  W  AH    ++  L+++K + RL D+ FV ICN +NDLS KVR +AA L+G +  VS R LEQTLDKKLMSN+R+K +AHER+ +   SGE   G K  D
Sbjct:  256 VKLLWVMAHLYPESKVTLKKSKEKIRLVDDTFVKICNMMNDLSWKVRAEAAGLLGSLHLVSPRFLEQTLDKKLMSNMRLKMSAHERQKEHFQSGEWASGNKWAD 359
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|1351422737|ref|XP_023932225.1| (integrator complex subunit 4-like isoform X1 [Lingula anatina])

HSP 1 Score: 94.7449 bits (234), Expect = 5.647e-20
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0 
Query:    2 IKKEWKDAH----AQEVLRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +K  W  AH    ++  L+++K + RL D+ FV ICN +NDLS KVR +AA L+G +  VS R LEQTLDKKLMSN+R+K +AHER+ +   SGE   G K  D
Sbjct:  256 VKLLWVMAHLYPESKVTLKKSKEKIRLVDDTFVKICNMMNDLSWKVRAEAAGLLGSLHLVSPRFLEQTLDKKLMSNMRLKMSAHERQKEHFQSGEWASGNKWAD 359
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|1238891770|ref|XP_022257591.1| (integrator complex subunit 4-like protein 2 [Limulus polyphemus])

HSP 1 Score: 91.6633 bits (226), Expect = 5.926e-19
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:   18 NKSEK-RLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            N  EK RLAD+AF  +C+ INDLS+ VR +AA L+G MD VS   LEQTLDKKLMSNLR KR+AHER+ +   SGE   G+K  D
Sbjct:  198 NSQEKIRLADDAFAKVCHMINDLSMNVRVQAASLLGGMDKVSLNFLEQTLDKKLMSNLRRKRSAHERQRENFESGEWSTGQKWAD 282
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|961080316|ref|XP_014768276.1| (PREDICTED: integrator complex subunit 4-like [Octopus bimaculoides])

HSP 1 Score: 91.6633 bits (226), Expect = 6.466e-19
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:   21 EKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGR 97
            E RL D+ FV ICN+IND S+KVR++AA L+G +  VS + LEQTLDKKLMSN+R KRTAHER  +   SGE   G+
Sbjct:  214 EIRLVDDGFVKICNSINDFSMKVRKEAASLLGSLHLVSPKFLEQTLDKKLMSNMRRKRTAHERARENYMSGEWSTGK 290
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|1126168532|ref|XP_019616182.1| (PREDICTED: integrator complex subunit 4-like [Branchiostoma belcheri])

HSP 1 Score: 91.2781 bits (225), Expect = 9.341e-19
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:   18 NKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  E RL D+ F  ICN +NDL++ VR +AA L+G +  VS+R LEQTLDKKLMS+LR KRTAHER  +L + GE   G+K  D
Sbjct:  266 SNEELRLVDDGFAKICNMVNDLTMTVRAEAAGLLGSLHRVSERFLEQTLDKKLMSHLRRKRTAHERAKELYARGEWSTGKKWGD 349
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|907672582|ref|XP_013104615.1| (PREDICTED: integrator complex subunit 4 isoform X1 [Stomoxys calcitrans])

HSP 1 Score: 90.1225 bits (222), Expect = 2.181e-18
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:   17 ENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            E++ E RL D AF  +C A+ DLS+++R +AA+ +GQM  V    L QTLDKKLMSNLR K+TAHER ++LV+SGE   G++  D
Sbjct:  283 EDEEEMRLIDAAFSKVCAALCDLSIQIRVQAAEHLGQMTMVGPEFLHQTLDKKLMSNLRRKKTAHERGAQLVASGEWSSGKRWAD 367
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|767949257|ref|XP_011515049.1| (PREDICTED: integrator complex subunit 4-like protein 2 isoform X2 [Homo sapiens])

HSP 1 Score: 86.2705 bits (212), Expect = 2.254e-18
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0 
Query:   15 LRENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  +  E RL D+AF  IC+ ++D S  V  +AA L+G M+ VS   LEQTLDKKLMS+LR KRTAHER  +L SSGE   GRK  D
Sbjct:   60 IPSSNEEIRLVDDAFGKICHMVSDGSWVVHVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWED 146
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|907672585|ref|XP_013104616.1| (PREDICTED: integrator complex subunit 4 isoform X2 [Stomoxys calcitrans])

HSP 1 Score: 90.1225 bits (222), Expect = 2.392e-18
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:   17 ENKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            E++ E RL D AF  +C A+ DLS+++R +AA+ +GQM  V    L QTLDKKLMSNLR K+TAHER ++LV+SGE   G++  D
Sbjct:  283 EDEEEMRLIDAAFSKVCAALCDLSIQIRVQAAEHLGQMTMVGPEFLHQTLDKKLMSNLRRKKTAHERGAQLVASGEWSSGKRWAD 367
[Close]
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Match: gi|260800692|ref|XP_002595231.1| (hypothetical protein BRAFLDRAFT_283451 [Branchiostoma floridae] >gi|229280475|gb|EEN51243.1| hypothetical protein BRAFLDRAFT_283451 [Branchiostoma floridae])

HSP 1 Score: 90.1225 bits (222), Expect = 2.635e-18
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:   18 NKSEKRLADEAFVCICNAINDLSVKVREKAADLMGQMDFVSQRNLEQTLDKKLMSNLRVKRTAHERESKLVSSGETKKGRKCRD 101
            +  E RL D+ F  ICN +NDL++ VR +AA L+G +  VS R LEQTLDKKLMS+LR KRTAHER  ++ + GE   G+K  D
Sbjct:  268 SNEELRLVDDGFAKICNMVNDLTMTVRAEAAGLLGSLHRVSARFLEQTLDKKLMSHLRRKRTAHERAKEMYARGEWSTGKKWGD 351
The following BLAST results are available for this feature:
BLAST of hypothetical protein PHACADRAFT_156102 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000048782.557e-2658.06supercontig:LSalAtl2s:LSalAtl2s256:83335:98605:1 g... [more]
back to top
BLAST of hypothetical protein PHACADRAFT_156102 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|74948983|sp|Q9W3E1.1|INT4_DROME3.733e-2053.57RecName: Full=Integrator complex subunit 4[more]
gi|118572560|sp|Q96HW7.2|INT4_HUMAN7.043e-2055.17RecName: Full=Integrator complex subunit 4; Short=... [more]
gi|81900516|sp|Q8CIM8.1|INT4_MOUSE8.386e-2055.17RecName: Full=Integrator complex subunit 4; Short=... [more]
gi|121945667|sp|Q2T9F4.1|IN4L2_HUMAN2.877e-1954.02RecName: Full=Integrator complex subunit 4-like pr... [more]
gi|74724241|sp|Q96LV5.1|IN4L1_HUMAN3.612e-1954.02RecName: Full=Integrator complex subunit 4-like pr... [more]
gi|82181815|sp|Q68F70.1|INT4_XENLA4.088e-1852.87RecName: Full=Integrator complex subunit 4; Short=... [more]
back to top
BLAST of hypothetical protein PHACADRAFT_156102 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1059383349|ref|XP_017786488.1|4.006e-2056.82PREDICTED: integrator complex subunit 4 [Nicrophor... [more]
gi|919073925|ref|XP_013418163.1|5.538e-2050.00integrator complex subunit 4-like isoform X2 [Ling... [more]
gi|1351422737|ref|XP_023932225.1|5.647e-2050.00integrator complex subunit 4-like isoform X1 [Ling... [more]
gi|1238891770|ref|XP_022257591.1|5.926e-1960.00integrator complex subunit 4-like protein 2 [Limul... [more]
gi|961080316|ref|XP_014768276.1|6.466e-1959.74PREDICTED: integrator complex subunit 4-like [Octo... [more]
gi|1126168532|ref|XP_019616182.1|9.341e-1954.76PREDICTED: integrator complex subunit 4-like [Bran... [more]
gi|907672582|ref|XP_013104615.1|2.181e-1852.94PREDICTED: integrator complex subunit 4 isoform X1... [more]
gi|767949257|ref|XP_011515049.1|2.254e-1854.02PREDICTED: integrator complex subunit 4-like prote... [more]
gi|907672585|ref|XP_013104616.1|2.392e-1852.94PREDICTED: integrator complex subunit 4 isoform X2... [more]
gi|260800692|ref|XP_002595231.1|2.635e-1853.57hypothetical protein BRAFLDRAFT_283451 [Branchiost... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold871_size86487supercontigscaffold871_size86487:72632..73033 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold871_size86487-processed-gene-0.16-mRNA-1snap_masked-scaffold871_size86487-processed-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold871_size86487:72632..73033-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold871_size86487-processed-gene-0.16 ID=snap_masked-scaffold871_size86487-processed-gene-0.16|Name=hypothetical protein PHACADRAFT_156102|organism=Tigriopus kingsejongensis|type=gene|length=402bp|location=Sequence derived from alignment at scaffold871_size86487:72632..73033- (Tigriopus kingsejongensis)
ATGATCAAGAAGGAATGGAAAGACGCCCACGCCCAAGAGGTGCTGCGGGA
GAACAAATCGGAGAAGCGCCTGGCCGACGAGGCCTTCGTGTGCATTTGCA
ACGCCATCAACGACCTCTCGGTCAAGGTGCGCGAAAAGGCGGCGGACCTC
ATGGGCCAGATGGACTTTGTGTCCCAGAGGAACTTGGAGCAGACCCTGGA
TAAGAAGCTCATGTCCAATTTGCGGGTCAAGCGCACGGCCCACGAGCGCG
AGTCCAAACTGGTCTCATCCGGAGAAACCAAGAAAGGAAGAAAATGCAGG
GACTTTATCTACTACACGGGAGTGCTTGAGGATTATATGATGACTGCTTT
GCTTAGGCACCCCAAACTACCATGGGTGAATACCTTCTTCTCCTGTAGCT
AG
back to top
Synonyms
The feature 'hypothetical protein PHACADRAFT_156102' has the following synonyms
Synonym
Tk08321
Add to Basket