PREDICTED: caspase-2-like, snap_masked-scaffold874_size86240-processed-gene-0.5 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Match: EMLSAG00000005600 (supercontig:LSalAtl2s:LSalAtl2s2:67232:70581:1 gene:EMLSAG00000005600 transcript:EMLSAT00000005600 description:"augustus_masked-LSalAtl2s2-processed-gene-0.4") HSP 1 Score: 82.4185 bits (202), Expect = 6.999e-20 Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 12 VKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 + +N +F+RE+ +F++ DH+ DM + V SHG + II+ + + TE I ++FNNQ CP L+GKPKFFI QACR Sbjct: 113 IVENPTRKEFMREVRSFAEDSDHEKIDMMALAVLSHGRNGMIITHEGAKVDTEWIYSQFNNQKCPLLKGKPKFFIIQACRG 193
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Match: EMLSAG00000000439 (supercontig:LSalAtl2s:LSalAtl2s1068:458655:462118:1 gene:EMLSAG00000000439 transcript:EMLSAT00000000439 description:"maker-LSalAtl2s1068-augustus-gene-3.17") HSP 1 Score: 50.8322 bits (120), Expect = 1.237e-8 Identity = 27/94 (28.72%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 32 EDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALHQMQRSLILLQTKTTLRRDNLPMRYMCCQEYV 125 +DH +D +++V SHG I + D+ + E + + FN + CP L GKPK + QAC+ Q+ + L+ +T +L R +++ Sbjct: 162 DDHTESDCLLILVLSHGESGLIYARDSA-YKPERLWSYFNGKNCPTLAGKPKMILIQACQG-DQLDHGVELVNNRTETDSASLGYRMPIYADFL 253
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|2493525|sp|Q98943.2|CASP2_CHICK (RecName: Full=Caspase-2; Short=CASP-2; AltName: Full=ICH-1L/1S; AltName: Full=Protease ICH-1; Contains: RecName: Full=Caspase-2 subunit p18; Contains: RecName: Full=Caspase-2 subunit p13; Contains: RecName: Full=Caspase-2 subunit p12; Flags: Precursor) HSP 1 Score: 67.3958 bits (163), Expect = 6.607e-13 Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +V V + + ++ L+ FS+L DH+ D C+V + SHG + + TD + ++ + F+N CPNL+ KPK F QACR Sbjct: 210 QVTVFHDQSAEEMESALERFSKLPDHQDVDSCIVALLSHGVEGGVYGTDGKLLQLQEAFRLFDNANCPNLQNKPKMFFIQACRG 293
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|10720035|sp|O89094.1|CASPE_MOUSE (RecName: Full=Caspase-14; Short=CASP-14; AltName: Full=Mini-ICE; Short=MICE; Contains: RecName: Full=Caspase-14 subunit p17, mature form; Contains: RecName: Full=Caspase-14 subunit p10, mature form; Contains: RecName: Full=Caspase-14 subunit p20, intermediate form; Contains: RecName: Full=Caspase-14 subunit p8, intermediate form; Flags: Precursor) HSP 1 Score: 63.929 bits (154), Expect = 5.660e-12 Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLED--HKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALHQ 95 E +K + QFL ELD F Q D + VV+ +HG + + D + +R E + NN+ C LRGKPK +I QACR H+ Sbjct: 53 ESTMKRDPTAQQFLEELDEFQQTIDNWEEPVSCAFVVLMAHGEEGLLKGEDEKMVRLEDLFEVLNNKNCKALRGKPKVYIIQACRGEHR 141
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|28558771|sp|P55211.3|CASP9_HUMAN (RecName: Full=Caspase-9; Short=CASP-9; AltName: Full=Apoptotic protease Mch-6; AltName: Full=Apoptotic protease-activating factor 3; Short=APAF-3; AltName: Full=ICE-like apoptotic protease 6; Short=ICE-LAP6; Contains: RecName: Full=Caspase-9 subunit p35; Contains: RecName: Full=Caspase-9 subunit p10; Flags: Precursor) HSP 1 Score: 62.003 bits (149), Expect = 4.778e-11 Identity = 36/88 (40.91%), Postives = 46/88 (52.27%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHG-NDDH------IISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQAC 90 V VK +L + + L +Q +DH + D CVVV+ SHG H + TD P+ E IV FN CP+L GKPK F QAC Sbjct: 201 VEVKGDLTAKKMVLALLELAQ-QDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQAC 287
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|83301030|sp|P29594.5|CASP2_MOUSE (RecName: Full=Caspase-2; Short=CASP-2; AltName: Full=Neural precursor cell expressed developmentally down-regulated protein 2; Short=NEDD-2; AltName: Full=Protease ICH-1; Contains: RecName: Full=Caspase-2 subunit p18; Contains: RecName: Full=Caspase-2 subunit p13; Contains: RecName: Full=Caspase-2 subunit p12; Flags: Precursor) HSP 1 Score: 61.6178 bits (148), Expect = 7.630e-11 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 24 ELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +L F+QL H+ D CVV + SHG + I D + ++ + + F+N CP+L+ KPK F QACR Sbjct: 254 KLQNFAQLPAHRVTDSCVVALLSHGVEGGIYGVDGKLLQLQEVFRLFDNANCPSLQNKPKMFFIQACRG 322
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|81902518|sp|Q920D5.1|CASPC_RAT (RecName: Full=Caspase-12; Short=CASP-12; Flags: Precursor) HSP 1 Score: 61.2326 bits (147), Expect = 8.008e-11 Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIIST---DNQP--IRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALH 94 V++K+NL + EL F+ +H+S+D +V SHG + I + +P + + I FNN CP+LR KPK I QACR H Sbjct: 214 VVIKENLTAQEMETELMKFAGRPEHQSSDSTFLVFMSHGILEGICGVKHRNKKPDVLHDDTIFTIFNNSNCPSLRNKPKILIMQACRGRH 303
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|83300977|sp|P42575.2|CASP2_HUMAN (RecName: Full=Caspase-2; Short=CASP-2; AltName: Full=Neural precursor cell expressed developmentally down-regulated protein 2; Short=NEDD-2; AltName: Full=Protease ICH-1; Contains: RecName: Full=Caspase-2 subunit p18; Contains: RecName: Full=Caspase-2 subunit p13; Contains: RecName: Full=Caspase-2 subunit p12; Flags: Precursor) HSP 1 Score: 60.8474 bits (146), Expect = 1.123e-10 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 24 ELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +L F+QL H+ D C+V + SHG + I D + ++ + + F+N CP+L+ KPK F QACR Sbjct: 254 KLQNFAQLPAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRG 322
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|83301061|sp|P55215.3|CASP2_RAT (RecName: Full=Caspase-2; Short=CASP-2; AltName: Full=Protease ICH-1; Contains: RecName: Full=Caspase-2 subunit p18; Contains: RecName: Full=Caspase-2 subunit p13; Contains: RecName: Full=Caspase-2 subunit p12; Flags: Precursor) HSP 1 Score: 60.8474 bits (146), Expect = 1.123e-10 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 24 ELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +L F+QL H+ D C+V + SHG + I D + ++ + + F+N CP+L+ KPK F QACR Sbjct: 254 KLQNFAQLPAHRVTDSCIVALLSHGVEGGIYGVDGKLLQLQEVFRLFDNANCPSLQNKPKMFFIQACRG 322
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|19859536|sp|P42573.2|CED3_CAEEL (RecName: Full=Cell death protein 3; AltName: Full=Caspase ced-3; Contains: RecName: Full=Cell death protein 3 subunit p17; Contains: RecName: Full=Cell death protein 3 subunit p15; Contains: RecName: Full=Cell death protein 3 subunit p13; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 2.011e-10 Identity = 33/83 (39.76%), Postives = 42/83 (50.60%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 VI KDNL G L + F++ E H D ++V+ SHG ++ II D+ PI T I N P L KPK QACR Sbjct: 280 VICKDNLTGRGMLLTIRDFAKHESH--GDSAILVILSHGEENVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQACRG 360
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|17433088|sp|Q9TV13.1|CASP1_HORSE (RecName: Full=Caspase-1; Short=CASP-1; AltName: Full=Interleukin-1 beta convertase; Short=IL-1BC; AltName: Full=Interleukin-1 beta-converting enzyme; Short=ICE; Short=IL-1 beta-converting enzyme; AltName: Full=p45; Contains: RecName: Full=Caspase-1 subunit p20; Contains: RecName: Full=Caspase-1 subunit p10; Flags: Precursor) HSP 1 Score: 58.9214 bits (141), Expect = 5.436e-10 Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIIS---TDNQP--IRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALHQ 95 V VK+NL EL AF+ +H+S+D +V SHG + I ++ P + I FN + CPNLR KPK I QACR +Q Sbjct: 201 VEVKENLTALDMTTELKAFAARPEHRSSDSTFLVFMSHGIREGICGKKFSEKVPDVLEVNTIFQIFNTRNCPNLRDKPKVIIIQACRGENQ 291
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|2493527|sp|P70677.1|CASP3_MOUSE (RecName: Full=Caspase-3; Short=CASP-3; AltName: Full=Apopain; AltName: Full=Cysteine protease CPP32; Short=CPP-32; AltName: Full=LICE; AltName: Full=Protein Yama; AltName: Full=SREBP cleavage activity 1; Short=SCA-1; Contains: RecName: Full=Caspase-3 subunit p17; Contains: RecName: Full=Caspase-3 subunit p12; Flags: Precursor) HSP 1 Score: 58.151 bits (139), Expect = 8.222e-10 Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = 0 Query: 13 KDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 K++L + L +D+ S+ EDH V V+ SHG D+ +I N P+ + + + F C +L GKPK FI QACR Sbjct: 88 KNDLTREDILELMDSVSK-EDHSKRSSFVCVILSHG-DEGVIYGTNGPVELKKLTSFFRGDYCRSLTGKPKLFIIQACRG 165
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|699687576|ref|XP_009888283.1| (PREDICTED: caspase-9 [Charadrius vociferus]) HSP 1 Score: 73.559 bits (179), Expect = 1.148e-12 Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGND-------DHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALHQMQRSLILLQTK------TTLRRDNLPMRYM 119 V+ + NL + EL +Q +DH++ D CVVV+ SHG I TD +PI E IV FN CP+LRGKPK F QAC + Q ++ + +L D P R + Sbjct: 179 VLTRQNLKAQDMVSELKKLAQ-QDHRALDCCVVVILSHGCQTSHIQFPGSIYGTDGEPIAIEKIVNCFNGSNCPSLRGKPKLFFIQACGGEQRDQGCVVDCDSPGDEAPGGSLESDATPFRTL 300
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|260783353|ref|XP_002586740.1| (hypothetical protein BRAFLDRAFT_105738 [Branchiostoma floridae] >gi|229271864|gb|EEN42751.1| hypothetical protein BRAFLDRAFT_105738 [Branchiostoma floridae]) HSP 1 Score: 73.1738 bits (178), Expect = 1.316e-12 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0 Query: 26 DAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 D +Q +DHK D CVVV+ SHG + I TDN P++ + I A F+N C L+GKPK F QACR Sbjct: 141 DKKAQRKDHKQKDCCVVVLMSHGEEGVIFGTDNVPVQLDEIFAMFDNNNCSRLKGKPKLFFIQACRG 207
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|847171610|ref|XP_012809163.1| (PREDICTED: caspase-2 [Xenopus tropicalis] >gi|1043405586|gb|OCA18292.1| hypothetical protein XENTR_v90025856mg [Xenopus tropicalis]) HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +V V+ NLN + +L AFS L H + D CVV V SHG D + TD + ++ + + +N CP L+ KPK F QACR Sbjct: 208 QVEVRRNLNAQNMMSQLGAFSALPAHSALDSCVVAVLSHGLDGAVYGTDGKLVQLQDVFTAMDNAHCPQLQNKPKMFFIQACRG 291
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|148233858|ref|NP_001079035.1| (caspase 9 S homeolog [Xenopus laevis] >gi|7619908|dbj|BAA94750.1| caspase-9 [Xenopus laevis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.574e-12 Identity = 46/121 (38.02%), Postives = 59/121 (48.76%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDH-------IISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQAC------RALHQMQRSLILLQTKTTLRRDNLPM 116 EV VKDNL G L A + +DH D C+VV+ SHG + + TD I E IV+ FN CP+LRGKPK FI QAC + + L T T+L+ D P+ Sbjct: 183 EVTVKDNLTGQAMHDHLQALAD-QDHSLQDCCLVVILSHGCETRHIQFPGGVYGTDGIRIPVERIVSYFNGSKCPSLRGKPKIFIIQACGGDQKDKGCEVTSETPPLSPTSTSLQSDATPV 302
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|960984548|ref|XP_014807537.1| (PREDICTED: caspase-9 isoform X1 [Calidris pugnax] >gi|960984550|ref|XP_014807538.1| PREDICTED: caspase-9 isoform X2 [Calidris pugnax] >gi|960984552|ref|XP_014807539.1| PREDICTED: caspase-9 isoform X3 [Calidris pugnax]) HSP 1 Score: 73.1738 bits (178), Expect = 1.802e-12 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHG-NDDH------IISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQAC 90 +V+ + NL + + EL +Q +DH + D C+VV+ SHG H + TD +PI E IV FN CP+LRGKPK F QAC Sbjct: 204 DVLTRQNLKAQEMVSELQKLAQ-QDHGALDCCIVVILSHGCQTSHNQFPGGVYGTDGKPIPIEKIVNYFNGSNCPSLRGKPKLFFIQAC 291 The following BLAST results are available for this feature:
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of PREDICTED: caspase-2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold874_size86240:58335..72787+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold874_size86240-processed-gene-0.5 ID=snap_masked-scaffold874_size86240-processed-gene-0.5|Name=PREDICTED: caspase-2-like|organism=Tigriopus kingsejongensis|type=gene|length=14453bp|location=Sequence derived from alignment at scaffold874_size86240:58335..72787+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'PREDICTED: caspase-2-like' has the following synonyms
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