PREDICTED: caspase-2-like, snap_masked-scaffold874_size86240-processed-gene-0.5 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Match: EMLSAG00000005600 (supercontig:LSalAtl2s:LSalAtl2s2:67232:70581:1 gene:EMLSAG00000005600 transcript:EMLSAT00000005600 description:"augustus_masked-LSalAtl2s2-processed-gene-0.4") HSP 1 Score: 82.4185 bits (202), Expect = 6.999e-20 Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 12 VKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 + +N +F+RE+ +F++ DH+ DM + V SHG + II+ + + TE I ++FNNQ CP L+GKPKFFI QACR Sbjct: 113 IVENPTRKEFMREVRSFAEDSDHEKIDMMALAVLSHGRNGMIITHEGAKVDTEWIYSQFNNQKCPLLKGKPKFFIIQACRG 193
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Match: EMLSAG00000000439 (supercontig:LSalAtl2s:LSalAtl2s1068:458655:462118:1 gene:EMLSAG00000000439 transcript:EMLSAT00000000439 description:"maker-LSalAtl2s1068-augustus-gene-3.17") HSP 1 Score: 50.8322 bits (120), Expect = 1.237e-8 Identity = 27/94 (28.72%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 32 EDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRALHQMQRSLILLQTKTTLRRDNLPMRYMCCQEYV 125 +DH +D +++V SHG I + D+ + E + + FN + CP L GKPK + QAC+ Q+ + L+ +T +L R +++ Sbjct: 162 DDHTESDCLLILVLSHGESGLIYARDSA-YKPERLWSYFNGKNCPTLAGKPKMILIQACQG-DQLDHGVELVNNRTETDSASLGYRMPIYADFL 253
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|2493526|sp|Q60431.1|CASP3_MESAU (RecName: Full=Caspase-3; Short=CASP-3; AltName: Full=Apopain; AltName: Full=Cysteine protease CPP32; Short=CPP-32; AltName: Full=Protein Yama; AltName: Full=SREBP cleavage activity 1; Short=SCA-1; Contains: RecName: Full=Caspase-3 subunit p17; Contains: RecName: Full=Caspase-3 subunit p12; Flags: Precursor) HSP 1 Score: 54.6842 bits (130), Expect = 1.343e-8 Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 EV K++L ++ + EL + EDH V V+ SHG++ I TD PI + + + F C +L GKPK FI QACR Sbjct: 84 EVRNKNDLTREEIV-ELMKNASKEDHSKRSSFVCVILSHGDEGVIFGTDG-PIDLKKLTSYFRGDYCRSLIGKPKLFIIQACRG 165
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|54035961|sp|Q95ND5.1|CASP3_PIG (RecName: Full=Caspase-3; Short=CASP-3; Contains: RecName: Full=Caspase-3 subunit p17; Contains: RecName: Full=Caspase-3 subunit p12; Flags: Precursor) HSP 1 Score: 54.6842 bits (130), Expect = 1.411e-8 Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 EV K++L ++ L + + S+ EDH + V+ SHG + I T N P+ + + + F C L GKPK FI QACR Sbjct: 84 EVRNKNDLTREEILELMHSVSK-EDHSKRSSFICVLLSHGEEGKIFGT-NGPVDLKKLTSFFRGDCCRTLTGKPKLFIIQACRG 165
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|266321|sp|P29466.1|CASP1_HUMAN (RecName: Full=Caspase-1; Short=CASP-1; AltName: Full=Interleukin-1 beta convertase; Short=IL-1BC; AltName: Full=Interleukin-1 beta-converting enzyme; Short=ICE; Short=IL-1 beta-converting enzyme; AltName: Full=p45; Contains: RecName: Full=Caspase-1 subunit p20; Contains: RecName: Full=Caspase-1 subunit p10; Flags: Precursor) HSP 1 Score: 53.9138 bits (128), Expect = 3.209e-8 Identity = 30/88 (34.09%), Postives = 43/88 (48.86%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQP-----IRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 V VK NL EL+AF+ +HK++D +V SHG + I + ++ I N + CP+L+ KPK I QACR Sbjct: 200 VDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRG 287
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|122144570|sp|Q153Z0.1|CASPC_MACMU (RecName: Full=Caspase-12; Short=CASP-12; Flags: Precursor) HSP 1 Score: 53.5286 bits (127), Expect = 3.968e-8 Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0 Query: 10 VIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIIST---DNQP--IRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 V++++NL + L F+ +H+S+D +V SHG + I T D +P + + I FNN+ C +LR KPK I QACR Sbjct: 215 VVIEENLTAQEMETALRQFAARPEHQSSDSTFLVFMSHGILNGICGTKHWDQEPDVLHDDTIFEIFNNRNCRSLRDKPKVIIMQACRG 302
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Match: gi|25090576|sp|O89110.1|CASP8_MOUSE (RecName: Full=Caspase-8; Short=CASP-8; Contains: RecName: Full=Caspase-8 subunit p18; Contains: RecName: Full=Caspase-8 subunit p10; Flags: Precursor) HSP 1 Score: 53.1434 bits (126), Expect = 6.666e-8 Identity = 25/84 (29.76%), Postives = 42/84 (50.00%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 E++ D+ ++ L+ + Q DHK+ D + + SHG+ + TD + + + F CP+L GKPK F QAC+ Sbjct: 282 EIVSYDDCTANEIHEILEGY-QSADHKNKDCFICCILSHGDKGVVYGTDGKEASIYDLTSYFTGSKCPSLSGKPKIFFIQACQG 364
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|585663695|ref|XP_006811879.1| (PREDICTED: caspase-2-like [Saccoglossus kowalevskii]) HSP 1 Score: 85.1149 bits (209), Expect = 1.182e-16 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 EV +KD+L G + R LD F+++ DH S D CV+ + SHG + I STD + ++ E I +KFN CP+LR KPK F QACR Sbjct: 200 EVHIKDDLIGKEIHRALDKFAEI-DHTSYDCCVIALLSHGVNGAIYSTDGELLKVEDITSKFNGANCPSLRRKPKLFFIQACRG 282
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|260841477|ref|XP_002613941.1| (hypothetical protein BRAFLDRAFT_67496 [Branchiostoma floridae] >gi|229299331|gb|EEN69950.1| hypothetical protein BRAFLDRAFT_67496 [Branchiostoma floridae]) HSP 1 Score: 82.8037 bits (203), Expect = 2.730e-16 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 0 Query: 25 LDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 L F+ E+HKSAD C+VV+ SHG +D I TD + ++ +I FNN+ CPNL+GKPK F QACR Sbjct: 112 LKTFAAKEEHKSADACIVVLMSHGAEDQICGTDGEMVKYSNIFEAFNNKNCPNLQGKPKLFFIQACRG 179
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|1126167103|ref|XP_019615401.1| (PREDICTED: caspase-2-like [Branchiostoma belcheri]) HSP 1 Score: 81.6481 bits (200), Expect = 1.055e-15 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 E + N+N R++ FS+ +DH+ D CVVV+ SHG+ I TDN+P+ E I F+N+ CP L+GKPK F QACR Sbjct: 103 ETYILPNMNARTMKRKISKFSKRKDHEQMDCCVVVLMSHGHKGVISGTDNKPVNLEDIFKMFDNENCPLLKGKPKLFFIQACRG 186
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|260815763|ref|XP_002602642.1| (hypothetical protein BRAFLDRAFT_81923 [Branchiostoma floridae] >gi|229287953|gb|EEN58654.1| hypothetical protein BRAFLDRAFT_81923 [Branchiostoma floridae]) HSP 1 Score: 82.0333 bits (201), Expect = 1.804e-15 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 E + +N+ E+ AFS+ ++H D CVVV+ SHG+ + I TDN+P+R E I F+N CP L GKPK F QACR Sbjct: 147 ETYILENITAKGIEDEILAFSKRQEHSQMDCCVVVLMSHGHRNVIAGTDNKPVRLEDIFTMFDNDKCPQLIGKPKLFFIQACRG 230
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|926623172|ref|XP_013776997.1| (cell death protein 3-like [Limulus polyphemus] >gi|1238854661|ref|XP_022244423.1| cell death protein 3-like [Limulus polyphemus] >gi|1238854663|ref|XP_022244424.1| cell death protein 3-like [Limulus polyphemus]) HSP 1 Score: 80.1073 bits (196), Expect = 5.437e-15 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 EV +K + Q + ++AFS+ +H+ + CVV++ SHG D + TD + ++ E I+ FNN+ CP L+GKPK F FQACR Sbjct: 191 EVTLKTDQTSQQMIDVIEAFSKKPEHEHVNSCVVIILSHGEYDIVYGTDAEEVQVEKILDYFNNESCPLLQGKPKMFFFQACRG 274
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|158426363|gb|ABW38000.1| (Bf-Death-caspase, partial [Branchiostoma floridae]) HSP 1 Score: 77.7962 bits (190), Expect = 2.536e-14 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 24 ELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRAL 93 E+ AFSQ ++H+ D C VV+ SHG + I TD+ P++ + I A F+N+ CP L+GKPK F QACR L Sbjct: 165 EVLAFSQRKEHRQMDCCAVVLMSHGEEGVIFGTDDVPVQLDDIFAMFDNKNCPRLKGKPKLFFIQACRGL 234
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|260783359|ref|XP_002586743.1| (hypothetical protein BRAFLDRAFT_105741 [Branchiostoma floridae] >gi|229271867|gb|EEN42754.1| hypothetical protein BRAFLDRAFT_105741 [Branchiostoma floridae]) HSP 1 Score: 77.7962 bits (190), Expect = 4.195e-14 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 24 ELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRAL 93 E+ AFSQ ++H+ D C VV+ SHG++ I TD+ P++ + I A F+N+ CP L+GKPK F QACR L Sbjct: 235 EVLAFSQRKEHRQMDCCAVVLMSHGDEGVIFGTDDVPVQLDDIFAMFDNKNCPRLKGKPKLFFIQACRGL 304
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|1325274821|ref|XP_023322075.1| (caspase-1-like [Eurytemora affinis] >gi|1325274823|ref|XP_023322076.1| caspase-1-like [Eurytemora affinis]) HSP 1 Score: 77.0258 bits (188), Expect = 8.520e-14 Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 9 EVIVKDNLNGDQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 +V + NL+ +++ F +H+ ADM ++ + SHG +D I +D + ++T+ +V +F+N CP LRGKPKFFI QACR Sbjct: 205 KVTWRSNLSYRDMCKQILQFRNKPEHQQADMAIICILSHGQNDVIAGSDGREMKTDWLVEQFSNTNCPGLRGKPKFFILQACRG 288
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|1126217683|ref|XP_019642903.1| (PREDICTED: caspase-2-like [Branchiostoma belcheri]) HSP 1 Score: 76.2554 bits (186), Expect = 1.511e-13 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 25 LDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 L F+ E+HK+AD C+VV+ SHG I TD + ++ + I FNN+ CPNL+GKPK F QACR Sbjct: 215 LKNFAAKEEHKTADACIVVLMSHGARGLIYGTDGETVKYKDIFDMFNNKECPNLQGKPKLFFIQACRG 282
BLAST of PREDICTED: caspase-2-like vs. nr
Match: gi|346230967|gb|AEO22139.1| (caspase 1/2 [Branchiostoma lanceolatum]) HSP 1 Score: 76.2554 bits (186), Expect = 1.707e-13 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0 Query: 19 DQFLRELDAFSQLEDHKSADMCVVVVASHGNDDHIISTDNQPIRTEHIVAKFNNQMCPNLRGKPKFFIFQACRA 92 ++ E+ AFSQ +DH+ D C VV+ SHG++ I TD++ ++ + I A F++ CP L+GKPK F QACR Sbjct: 339 EEIKEEVRAFSQRKDHRQMDCCFVVLMSHGDEGVIYGTDDKTVKLDDIFAMFDDNKCPRLKGKPKLFFIQACRG 412 The following BLAST results are available for this feature:
BLAST of PREDICTED: caspase-2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of PREDICTED: caspase-2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of PREDICTED: caspase-2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold874_size86240:58335..72787+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold874_size86240-processed-gene-0.5 ID=snap_masked-scaffold874_size86240-processed-gene-0.5|Name=PREDICTED: caspase-2-like|organism=Tigriopus kingsejongensis|type=gene|length=14453bp|location=Sequence derived from alignment at scaffold874_size86240:58335..72787+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'PREDICTED: caspase-2-like' has the following synonyms
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