heparan sulfate 2-o-sulfotransferase pipe, snap_masked-scaffold89_size390429-processed-gene-2.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000010783 (supercontig:LSalAtl2s:LSalAtl2s714:137945:161106:-1 gene:EMLSAG00000010783 transcript:EMLSAT00000010783 description:"snap_masked-LSalAtl2s714-processed-gene-1.8") HSP 1 Score: 85.1149 bits (209), Expect = 1.264e-17 Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 843 TAFLAHIRY--FSHPNF-HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNA--------ERWLNMTIDECIASAQDECSIQAG--RAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRG 986 + ++ H+ + FS N PI++++VRDPVER IS +YY+R A + RK A WL + C+ ECS + G R +FCG + C N+ VA+ KA E++ +++++VG+LEE L LE P+FF+G Sbjct: 172 SVYVKHVCFSNFSRYNLPMPIYVNMVRDPVERVISWYYYVR-------APWYFVERKRAFPDLPLPNPNWLKKDFEFCVRRGDKECSYRTGDERTDFGQLTEFFCGQEDDCTGFNTEVAMKKAMENVEKHYAVVGVLEELNKTLTVLEHYVPRFFKG 321
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 85.8853 bits (211), Expect = 1.306e-17 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 18 DTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKF-VCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKK 105 + LP+ C +CG + H+ YG C SCRAFFRR+++ + +F C K C +N TRKSC+ CRF KC+ AGM+ +VL D +++ Sbjct: 100 EALPRLCQICGEVAGK-HVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERR 187
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 85.1149 bits (209), Expect = 2.426e-17 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRL-LKKLEDQGIDSKDMVVKKAS 131 C +C T+ H++YGA C SCRAFFRRA+ N ++ C + TC + TRK C+ CRFNKCLEAGMK +V+ +S+K+ + ++ LKKL+ Q + + VKK+S Sbjct: 63 CHICSDTAND-HIHYGAIACXSCRAFFRRAV--ICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLKAQQLLDPENGVKKSS 168
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 84.7297 bits (208), Expect = 3.649e-17 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0 Query: 16 GDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVC-KKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKK 105 G LP+ C +CG + H+ YG C SCRAFFRR+++ + +F+C + C +N TRK+C+ CRF KC+ AGM+ +V D +++ Sbjct: 99 GRQALPRLCQICGEVAGK-HVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERR 188
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 82.4185 bits (202), Expect = 1.629e-16 Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIR 107 C VCG + H++YG CFSCRAFFRR++ ++ + C C + TTRK+C+ CR+ KCLE+GMK +VL + +K R Sbjct: 91 CNVCGDKAPD-HIHYGGIACFSCRAFFRRSV--PKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSR 171
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 75.8702 bits (185), Expect = 2.320e-14 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIR 107 C VCG FH YG +C SC+ FF+R ++ +N +VC +G C V +TRK C CRF+KCL GMK + + +D + R Sbjct: 155 CPVCGDKISGFH--YGIFSCESCKGFFKRTVQNKKN--YVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGR 234
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000004802 (supercontig:LSalAtl2s:LSalAtl2s253:627553:628590:-1 gene:EMLSAG00000004802 transcript:EMLSAT00000004802 description:"augustus_masked-LSalAtl2s253-processed-gene-6.4") HSP 1 Score: 73.1738 bits (178), Expect = 4.397e-14 Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 851 YFSHPNFH-------PIWISLVRDPVERFISRFYYIRRQAERFKAKAR-EIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRG 986 +FS+ NF P++I+++R P++R +S +Y++R + K R +G K +T DEC+ +C + P +FCG C SR AL +AK +++R++ LVG+ E+ + F+ LE PQFF+G Sbjct: 96 HFSYLNFERLGSPLSPLYINMIRRPIDRLVSYYYFLRYGDDYRVNKIRSRMGDK-------VTFDECVEKKLPDCDPKKLWIQVP----WFCGHFRRCSEPGSRWALEQAKLNVARSYFLVGLTEDLEGFIDILEKSLPQFFKG 228
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 71.2478 bits (173), Expect = 7.659e-13 Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0 Query: 13 KGEGDDTLPKE--CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDD 101 K +G + P E C VCG + +H Y A C C+ FFRR+I ++N + CK G CE++ R+ C+ CR KC GM+ + V+ + Sbjct: 160 KKKGSSSRPAEELCLVCGDRASGYH--YNALACEGCKGFFRRSI--TKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPE 246
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 71.2478 bits (173), Expect = 7.815e-13 Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0 Query: 22 KECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDD 101 + CAVCG + H YGA++C C+ FFRR++ + R + C++ C VN R +CR CR C++AGMK V ++ Sbjct: 149 QNCAVCGDRATGKH--YGAASCDGCKGFFRRSVRKER--VYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNE 224
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 70.8626 bits (172), Expect = 8.083e-13 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0 Query: 22 KECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIR--FRRLLK 113 + C VCG + FH YG S+C +C+AFF+R I+ N ++ CE+N RK+C+ CRF KCL GM + V D + R +RR+++ Sbjct: 269 RTCLVCGDIASGFH--YGVSSCEACKAFFKRTIQG--NIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE 358
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|6094474|sp|Q91279.1|THB_PAROL (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 90.1225 bits (222), Expect = 8.818e-18 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 32 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 117
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|215273960|sp|Q9PVE4.2|THB_DANRE (RecName: Full=Thyroid hormone receptor beta; Short=TR-beta; Short=TRb; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=Thyroid hormone receptor beta-1; Short=TRbeta1) HSP 1 Score: 90.1225 bits (222), Expect = 9.397e-18 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 32 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 117
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461034|sp|Q76KB1.1|HS2ST_CHICK (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=cHS2ST) HSP 1 Score: 89.3521 bits (220), Expect = 1.015e-17 Identity = 52/150 (34.67%), Postives = 81/150 (54.00%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A+ +C+ + I +FCG S C SR AL +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAAGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWALEQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461002|sp|Q5R621.1|HS2ST_PONAB (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 88.1965 bits (217), Expect = 2.764e-17 Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67460984|sp|O93336.1|HS2ST_XENLA (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.815e-17 Identity = 59/180 (32.78%), Postives = 92/180 (51.11%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQLKSEERMNKSGGHNLKREEAFLKNLKAKLAQ 1020 + H+ + F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A+ +C+ + I +FCG S C SR AL +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L + KS ++A K AKL Q Sbjct: 139 YHGHVSFLDFTKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAAGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWALDQAKYNLVNEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRSGK--KSHLRKTTEKKAPSKETTAKLQQ 306
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67461059|sp|Q8R3H7.2|HS2ST_MOUSE (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2-OST; Short=2OST) HSP 1 Score: 88.1965 bits (217), Expect = 3.002e-17 Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + HI Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + P +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T L Sbjct: 139 YHGHISYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWLQIP----FFCGHSSECWNVGSRWAMDQAKSNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATDL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|68052326|sp|Q7LGA3.1|HS2ST_HUMAN (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 87.8113 bits (216), Expect = 3.143e-17 Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + H+ Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T+L Sbjct: 139 YHGHVSYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATEL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 87.8113 bits (216), Expect = 3.795e-17 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLLKK 114 C VCG + +H Y TC C+ FFRR I+++ +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+++ Sbjct: 19 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLIEE 106
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|67460981|sp|O08889.1|HS2ST_CRILO (RecName: Full=Heparan sulfate 2-O-sulfotransferase 1; Short=2-O-sulfotransferase; Short=2OST) HSP 1 Score: 87.4261 bits (215), Expect = 4.621e-17 Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 845 FLAHIRYFSHPNF----HPIWISLVRDPVERFISRFYYIRRQAERFKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGITQL 990 + HI Y F PI+I+++RDP+ER +S +YY R + ++ R RK ++ T DEC+A +C+ + I +FCG S C SR A+ +AK +L + LVG+ EE + F+ LE+ P+FFRG T L Sbjct: 139 YHGHISYLDFAKFGVKKKPIYINVIRDPIERLVS-YYYFLRFGDDYRPGLRR--RKQGDK---KTFDECVAEGGSDCAPEKLWL----QIPFFCGHSSECWNVGSRWAMDQAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATDL 278
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Match: gi|586094|sp|P18113.2|THB_RAT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta) HSP 1 Score: 88.5817 bits (218), Expect = 5.248e-17 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I++S +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 107 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDS-KRLAKRKLI 192
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1228400227|ref|XP_021959075.1| (heparan sulfate 2-O-sulfotransferase pipe-like [Folsomia candida] >gi|1215262716|gb|OXA49035.1| Heparan sulfate 2-O-sulfotransferase pipe [Folsomia candida]) HSP 1 Score: 95.9005 bits (237), Expect = 1.905e-17 Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 860 IWISLVRDPVERFISRFYYIRRQAER-FKAKAREIGRKNAERWLNMTIDECIASAQDECSIQAGRAYEPSPITYFCGFDSPCPLHNSRVALAKAKEHLSRNFSLVGILEEFQPFLARLESKFPQFFRGI--TQLKSEERM 996 ++I++VRDP+ER IS +YY+R R F AK R+ + ++WL C+ DEC + S + +FCG D C N AL++A E++ + +S+VG+LEE L E+ P+ F G T LK++E M Sbjct: 143 VYINMVRDPLERMISWYYYMRLGGVRNFVAKMRKNNKPEDDKWLQRDFSTCVLQNYDECRFEGAHENVWSQMMFFCGMDERCNEKNGAWALSRAMENVDKYYSVVGVLEELDLSLEVFEAYIPRVFAGARETYLKNKETM 282
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1942117|pdb|2NLL|B (Chain B, Retinoid X Receptor-Thyroid Hormone Receptor Dna-Binding Domain Heterodimer Bound To Thyroid Response Element Dna) HSP 1 Score: 88.5817 bits (218), Expect = 2.544e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 24 CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 C VCG + +H Y TC C+ FFRR I+++ +P + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 4 CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS-KRLAKRKLI 89
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|345505251|gb|AEN99848.1| (nuclear receptor subfamily 1 group A member 2, partial [Oncorhynchus mykiss]) HSP 1 Score: 89.3521 bits (220), Expect = 2.977e-17 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0 Query: 5 KRKRVCIPKGEGDDTLPKE--CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLLKK 114 +RK + G L K+ C VCG + +H Y TC C+ FFRR I+++ NP + CK C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+++ Sbjct: 2 RRKHEAMQNGYIPSYLDKDELCVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLIEE 110
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|528509686|ref|XP_005159562.1| (thyroid hormone receptor beta isoform X6 [Danio rerio]) HSP 1 Score: 93.5893 bits (231), Expect = 3.464e-17 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 7 KRVCIPKGEGDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 K+ IP D L C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 111 KKGYIPSYLDKDEL---CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 210
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Match: gi|1207139707|ref|XP_021323666.1| (thyroid hormone receptor beta isoform X5 [Danio rerio]) HSP 1 Score: 93.5893 bits (231), Expect = 4.402e-17 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 7 KRVCIPKGEGDDTLPKECAVCGITSETFHLNYGASTCFSCRAFFRRAIERSRNPKFVCKKGGTCEVNPTTRKSCRKCRFNKCLEAGMKTDFVLDDSQKKIRFRRLL 112 K+ IP D L C VCG + +H Y TC C+ FFRR I+++ NP + CK G C ++ TR C++CRF KC+ GM TD VLDDS K++ R+L+ Sbjct: 111 KKGYIPSYLDKDEL---CVVCGDKATGYH--YRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDS-KRLAKRKLI 210 The following BLAST results are available for this feature:
BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of heparan sulfate 2-o-sulfotransferase pipe vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold89_size390429:262326..282335+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold89_size390429-processed-gene-2.6 ID=snap_masked-scaffold89_size390429-processed-gene-2.6|Name=heparan sulfate 2-o-sulfotransferase pipe|organism=Tigriopus kingsejongensis|type=gene|length=20010bp|location=Sequence derived from alignment at scaffold89_size390429:262326..282335+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'heparan sulfate 2-o-sulfotransferase pipe' has the following synonyms
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