atp-dependent rna helicase ddx42-like, snap_masked-scaffold907_size82601-processed-gene-0.19 (gene) Tigriopus kingsejongensis

Overview


Name	atp-dependent rna helicase ddx42-like
Unique Name	snap_masked-scaffold907_size82601-processed-gene-0.19
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30")

HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0
Identity = 479/749 (63.95%), Postives = 561/749 (74.90%), Query Frame = 0

Query:   15 GGLYGAFVTSSDS-NRPYRGAEIAPPTHLNSGRGGGMVNEAPRDRQSFNNPTPGVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEAD-----LPYQPAPGSPGATQAEESDSEEDP---------LDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRN-ADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKA 747
            GGLY  FV  S S +RPYRGAEI                 + +   +  NP P  +    +S  S +  +  FQE PI+K R+EE+YFN+DEE +  +          PY P+PGSPG        S +           LD FMANLEKD + +GL  +     +  K T K     KGVR DIDEAD+EESYYKWLE+NPNAG    DED++DIEYDE+GNPI     KYIDPLPP++H+ I+Y  F+K FY EHNDI  LS IQV+DLQQKLG+KISG  PPKPVTSF HFGFDE L+K+IRKSEFTQPTPIQ+ GIP  LSGRD IGIAKTGSGKTA FLWP+++HI  Q PL+ G+GPI LILVPTRELALQIYTEAKKFGKVYDLN VCAYGGGSKWEQSK FE GAE+ IATPGRMIDM+KMKVTNL RV+YL+LDEADRMFDMGFE QVRSICDHVRPDRQ  LFSATFK+++E+LARD L DPIK+VQGS+GEASEDVTQ+VKV++ GGYKW W+L +LVEF SAG+VLIFVTKK NCEELA NL +KE EC  IHGDL+Q  RNEII KFKKK+FPILVATDVAARGLDIPHIRTV+N+D+ARDIDTHTHR+GRTGRAG+KG AYTLVTEKDKEFAGH+VRNLE ANQDVPK+LM+LAM+SSWF++SRFK+G+    + +  GLG   +   SL       GDS A   + G ++   GRL  V+ A+KNQ+M+ FRKA
Sbjct:    8 GGLYAHFVNDSSSGDRPYRGAEIP----------PPSSLSSRQSSSAGRNPNPNSNSGTTNSSKSFNYKD--FQELPIKKTRSEEDYFNEDEEDDKEKERKKQEESFCPYIPSPGSPGYIPPSSQKSPKKSEDEDEEEDSLDTFMANLEKDAKSQGLKSL-----NKPKDTTKT---FKGVRTDIDEADNEESYYKWLEENPNAGLMPVDEDDDDIEYDEDGNPIAPKLPKYIDPLPPMDHSAIEYMPFDKCFYKEHNDITCLSPIQVIDLQQKLGIKISGVSPPKPVTSFGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQANQDVPKELMDLAMQSSWFKNSRFKKGK----MGKTVGLGFKESVD-SLN------GDSKA---ISGPVS--GGRLGVVREAYKNQFMTNFRKA 720

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 380.563 bits (976), Expect = 2.989e-119
Identity = 211/542 (38.93%), Postives = 314/542 (57.93%), Query Frame = 0

Query:  137 EDPLDAFMANLEKDVQK-RGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINL------TSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKL-GVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGK-VYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKM---KVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNL-HIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665
            +DPL+++M  + K+V+K +G+   +    S          + +G                    N   G   +++++ +EY  E +  NL       + K    L  I+H DI Y  F KNFY E  ++  +++ +V   + +L G+K+ G   PKP+ ++ H G  + ++  ++++ + +PTPIQ Q IP ++SGRD+IGIAKTGSGKT AFL P+  HIM QP L  GDGPI +I+ PTREL +QI  E KKF K +     VC YGG    EQ    ++GAE+++ TPGRMIDML     +VTN  R++Y++LDEADRMFDMGFEPQV  I D+ RPD+Q  +FSATF R++E LAR  L  P+++  G      +D+ Q V V++   +K+  LL  L +  S G ++IFV K+++ + L  +L       C  +HG + Q +R+ II  FK  +  ILVAT VAARGLD+  +  VVN+D     + + HR GRTGRAG  G A T +T +   +AG +++ +E ++  VP  L +L
Sbjct:   81 DDPLESYMKEVNKEVRKLKGVKGTKTEKGSGGVVIMTGVAKKRGAGG-----------------NAKRGELIEQNQDGLEYSSEDDEDNLDDAMSQLAKKGRKELTKIDHRDIAYQPFVKNFYREVPELTKMTSDEVEVYRLELEGIKVKGKNAPKPIKNWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLE-EEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAPLKDL 604

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33")

HSP 1 Score: 331.643 bits (849), Expect = 1.150e-101
Identity = 180/430 (41.86%), Postives = 256/430 (59.53%), Query Frame = 0

Query:  247 FEKNFYNEHNDIATLSNIQVMDLQQKLGVKI-SGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVG-EASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSA---GTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSW 671
            FEK+FYN H +I       V   + +  + I  G   P P+  F   GF + ++K  ++  F +PT IQ+QG P  LSG +++GIA TGSGKT  +L P ++H+ +QP L  GDGPI L+L PTRELA QI   A +FG+   +   C +GG  K  Q +  E+G E+VIATPGR+ID+L+M   N+ R +YL+LDEADRM DMGFEPQ+R I + +RPDRQ  ++SAT+ + + RLA D L+D + I  G+    A+ ++ Q+V V +   ++    L+ L+E +       +LIFV  K+  +EL   +        CIHGD  Q+ER+ ++ +FK     IL ATDVAARGLD+  ++ V+N+D   + + + HR+GRTGR    G AYTL T  +   A  LV  L  A Q V   L ELA  S +
Sbjct:   74 FEKHFYNPHPNILNAEKKTVEAYRDEKEITIVRGHNIPNPILDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTRELAQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCE--DFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVDVLLEAKQVVNPKLQELAQCSGF 501

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 295.049 bits (754), Expect = 1.244e-89
Identity = 168/447 (37.58%), Postives = 255/447 (57.05%), Query Frame = 0

Query:  267 MDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMD----QP-PLVRGDG----PIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSIC--DHVRP--DRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTV-------------LIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRG---RGKG 684
             D  + + V+ +G   P  +  F      E +   I+ + +++PTP+Q   IPA+ +GRD++  A+TGSGKTAAFL P+L  I +    QP P  +       P+ LIL PTRELA QI+ EAKKF     +     YGG + +EQ    ++G  L++ATPGR++DML     +L +  YL+LDEADRM DMGFEPQ+R I   D++ P   RQ  +FSATF + I+ LARD L + I +  G VG  SE++TQ +  VD    +     S L++ + A  +             L+FV  ++  ++L   L+ +      IHGD  Q+ER + +++F+    PILVAT VAARGLDIP+++ V+NFD+  D++ + HR+GRTGR G  G A +   ++++     LV  +  +NQ  P  L  +A++   +  + F++G   RG+G
Sbjct:  160 FDRYEDIPVEATGDNVPDGINDFMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKR-----SFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDLVELIVESNQQCPNWLESMALEIRSYGGNVFRKGASSRGRG 601

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 288.5 bits (737), Expect = 8.458e-89
Identity = 155/371 (41.78%), Postives = 228/371 (61.46%), Query Frame = 0

Query:  299 MKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQP-PLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEAS-EDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAM 667
            M  I+K  F  P+PIQ Q  P LL G D+IGIA+TG+GKT AFL P  +HI  Q  P  +  GP  L+L PTRELALQI  E KK+ +   +  VC YGGG +  Q K   +G ++VIATPGR+ D+++     +  ++YL+LDEADRM DMGFEPQ+R I   VRPDRQ  + SAT+   + RLA + + DPI +  GS+  A+   VTQ + VV+    K + LL            +IF++KK   ++ + +L +  ++C+ IHG   Q +R + +  FK     IL+ATDVA+RG+D+  I  V+NFD    ++ + HR+GR+GRAG KG++ + +T +D+  A  L+  +  ANQ +P++++ + M
Sbjct:    1 MTAIQKRGFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKY-EYRGIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRDRPLAQGLIDIMTEANQPIPREVLSINM 370

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 286.96 bits (733), Expect = 7.261e-88
Identity = 177/433 (40.88%), Postives = 249/433 (57.51%), Query Frame = 0

Query:  245 DAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKI--SGAIPPKPVTSFAHFG-FDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMD--QPPLVRG--DGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEAS-EDVTQVVKVVDLGGY--KWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAM 667
            + F+K FY+   D + LS+ ++ D  +K  + +   G+    PV SF       +  +K  +   F  PTPIQ+   P + SGRDVIGIA+TGSGKT AF  P L HI +  Q P V+G    PI LI+ PTRELA+Q     +  GK      +C YGG +K+ Q +  + G E+++ATPGR++D+ +    +L+ VSY++LDEADRM D GFE  +R I      +RQ  LFSAT+   I +LA + L  PIK+  GS   A+ + VTQ+V+VVD      K   LL+          +LIFV  K+  + L ++L   E  C  IHGD  Q  R + ++ FK  + PIL+ATDVAARGLDIP +  V+N+     I+ + HR+GRTGRAG  G A+T     DK  AG LV  L+ +NQDVP ++ +  +
Sbjct:   66 EIFKKCFYDGKGD-SKLSSSEIKDYFKKHSIHVYGQGSESIVPVLSFDDMSSLGKKCLKCCK--SFKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRP-VKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKY--HKKKNRILIFVLYKREADRLWNSLK-HEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFFHLGDKARAGELVNVLKESNQDVPPEMYKFDL 491

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 269.626 bits (688), Expect = 1.471e-81
Identity = 163/423 (38.53%), Postives = 236/423 (55.79%), Query Frame = 0

Query:  265 QVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLV-RGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSL--NDPIKIVQGSVG-EASEDVTQVVKVVD----LGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTE-KDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFK 678
            ++   ++K  + + G +   PV SF   GF   L++ I+   F  PT IQAQG P   +G+++I I +TGSGKT  F+ P L H+M  PP   RGDGP+ LI+ PTRELA QI+     F     +   C  GG  K  Q +   +GAE+V+ATPGR+ID+++    +L R SY++LDEADRM DMGFEPQ+R I   VRPDRQ  ++SAT+   ++ LA D     D   +  GS    A++ + Q  K  +    +   K   +L SL E + +  VLIF   K   ++L   L         IHGD  Q  R   + KF+     ILVATDVA+RGLD+  I+ V+N+D   +I+ + HR+GRTGR   +G +++   E +D   A  L+  L+ A+Q +P  L E++  S   +  +FK
Sbjct:   57 EICSFREKNRIVVKG-VDTDPVFSFQETGFPLGLIERIKSHGFEAPTAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVDGFAS--KIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIK--EILESLSE-VESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFDEVEDGSKAKDLINVLKEAHQSIPHKLQEISRMSYKPKKKQFK 473

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 275.018 bits (702), Expect = 3.904e-81
Identity = 156/404 (38.61%), Postives = 222/404 (54.95%), Query Frame = 0

Query:  269 LQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGD----GPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHV-----RPD--------------------RQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGT---VLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKD 640
             ++   + I G   P P+  +        +++ I K  +T+PTPIQ Q IP  L  RD+IG+A+TGSGKT AFL P+LV I   P   R +    GP  +I+ PTRELA QI  E   FG    +  V   GG S+ +Q      G E+VIATPGR+ID+L+ +   L+R +Y++LDEADRM DMGFEP V+ I DH+     +PD                    RQ  +F+AT    +ERLAR  L  P  +  GS+G   E V QVV ++     K N   + L+  ++ G    ++IFV +K+  ++LA  L         +HG   Q++R   +   K     ILVATDVA RG+DI ++  V+N+D+A+ I+ +THR+GRTGRAG  G A +  T++D
Sbjct:  306 FREDYNIAIKGGNIPHPIRKWKEACLSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMM-----KENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQED 704

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14")

HSP 1 Score: 280.026 bits (715), Expect = 5.246e-80
Identity = 168/447 (37.58%), Postives = 247/447 (55.26%), Query Frame = 0

Query:  268 DLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQP---PLVRGDGPIGLILVPTRELALQI------YTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAG--TVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTE-KDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSL 702
            +L++K  + + G  PP P+ SF    F  P++K +++    +PT IQ QGIPA+LSGRD+IGIA TGSGK+  F+ P+++  ++Q    P V+ +GP GLI+VP+RELA QI      Y    K     ++    A GG S  E     +KG  +V+ATPGR++D+L  K+ NL    YL LDEADRM DMGFE  VR+I  + +  RQ  LFSAT  ++I+  A+ +L  PI +  G  G AS ++ Q V+ V     K    +  ++E +      VLIF  +KQ+ + +   L +K +    +HG   Q +R++ +  F+     +LVATDVA++GLD P I+ V+N+D+  DI+ + HR+GRTGR   KG A T++ +  D+     L   L  A Q VP  L  L  +    +      G  +GC     GLG      P L
Sbjct:  954 ELRRKKSIIVEGWNPPPPLKSFQDMKFPLPIIKALKEKGIERPTSIQMQGIPAVLSGRDLIGIAYTGSGKSLVFILPIVMFCLEQEKRLPFVQNEGPYGLIVVPSRELAKQIHESIYSYFSYLKKNSFPEIRSCLAIGGTSSSETMDVVKKGVHIVVATPGRLMDLLNKKMLNLEICRYLCLDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYV-----KSEAKVVHIIEMLKKTPPPVLIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMINKLVDENVLLDLKHLLIEAKQKVPPFLATLENE----QERXLDVGEQRGC-TYCGGLGHRXTNCPKL 1390

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BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 251.521 bits (641), Expect = 5.524e-74
Identity = 153/394 (38.83%), Postives = 221/394 (56.09%), Query Frame = 0

Query:  283 PKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDG----PIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKG--FEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVR----PDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGY-KWNWLLSSLVE--FMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLV-TEKDKEFAGHLVRNLEAANQDVPKDL 662
            P P+  F    F   L   I +  +T+PTP+Q   +P +L   D+I  A+TGSGKTA FL P ++H + +  +         P  LIL PTREL +QI  EA+K+    +++    YGG S  E SK        +++ ATPGR+IDML  +  +   + +L++DEADRM +MGF   +  + +H        RQ  LFSATF   I+ LA + L D + +  G VG ASED+ QV+  V +  Y K   LL +L E        +LIF  KK+  + LA  L + +     IHGD  Q++R E ++ FK+   PILVAT+VA+RGLDIP +  V+N+D+ +DI T+ HR+GR+GR G  G + +   +E D+  A  LV  L+ A Q VP+ L
Sbjct:  160 PTPINLFRDTPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLP-IIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSST-ESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVI--VQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVLKEAKQHVPEWL 549

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|82209788|sp|Q7ZY47.1|DDX42_XENLA (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42)

HSP 1 Score: 744.577 bits (1921), Expect = 0.000e+0
Identity = 385/711 (54.15%), Postives = 498/711 (70.04%), Query Frame = 0

Query:   66 PGVSKHGYSSLTSIHASNM----SFQEAPIRKQRTEEE--YFNDDEEAEAAQAEADLPYQPAPGSPGATQAE---ESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGV 759
            P VS   + S +S + S      SF +   ++   +EE  YF+D+EE     +  DLPY PA  SP   Q     +SDSEEDPL+AFMA +E D   + + K+E           K +   +G+R DI+E DD+E+Y++++ +NP AG   +E+E+++EYD +GNPI  T+ + IDPLPPI+H +I+Y  FEKNFY EH  I + +  Q+ +L+ KL +++SGA PP+  +SFAHFGFDE L+  IRKSE+TQPTPIQ QGIP  LSGRD+IGIAKTGSGKTAAF+WP+LVHIMDQ  L   DGPI +I+ PTREL  QI++E K+FGK Y+L  V  YGGGS WEQ+K  ++GAE+V+ TPGR+ID +K K TNL RV+YL+ DEADRMFDMGFE QVRSI +HVRPDRQ  LFSATF+++IE+LARD L DPI++VQG +GEA+ED+TQVV+++  G  KW WL   LVEF S G+VL+FVTKK N EELA NL   +     +HGD+ Q ERN++I  FKKK  P+LVATDVAARGLDIP I+TVVN+DVARDIDTHTHR+GRTGRAG KG AYTL+T K+  FAG LVRNLE ANQ V K+L++LAM++SWFR SRFK G+GK   +        ERPGLG  S+E  +  +    Y    A K  GG++     RLSA+K AF++QY + F  A  +    G + +
Sbjct:   32 PQVSHSAFQSASSKYGSTSNQLPSFYKIGSKRANFDEENSYFDDEEED---SSNVDLPYIPAENSPTRQQLRSKTDSDSEEDPLEAFMAEVE-DQAAKDMRKLEER--------DKEKANARGIRDDIEEEDDQEAYFRYMAENPTAGLVPEEEEDNLEYDSDGNPIAPTTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRLVEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSERNKVISDFKKKSIPVLVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKESNFAGDLVRNLEGANQYVSKELLDLAMQNSWFRKSRFKAGKGKKLNIGGGGLGYRERPGLGAESSEHGTGGNVMSNY---EAFKPSGGAMGD---RLSAMKSAFQSQYKNHFVAASASTQKTGTSSI 724

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|74750541|sp|Q86XP3.1|DDX42_HUMAN (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42; AltName: Full=RNA helicase-like protein; Short=RHELP; AltName: Full=RNA helicase-related protein; Short=RNAHP; AltName: Full=SF3b DEAD box protein; AltName: Full=Splicing factor 3B-associated 125 kDa protein; Short=SF3b125)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 379/658 (57.60%), Postives = 482/658 (73.25%), Query Frame = 0

Query:   97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEE----SDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGG-SLATGA--GRLSAVKVAFKNQYMSKFRKA 747
            E  YF D+EE     +  DLPY PA  SP   Q       SDS++DPL+AFMA +E D   R + ++E           K +  +KG+R DI+E DD+E+Y++++ +NP AG   +E+E+++EYD +GNPI  T  K IDPLPPI+H++I Y  FEKNFYNEH +I  L+  Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM  IRKSE+TQPTPIQ QG+P  LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ  L  GDGPI +I+ PTREL  QI+ E K+FGK Y+L  V  YGGGS WEQ+K  ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI  HVRPDRQ  LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++  G  KWNWL   LVEF S+G+VL+FVTKK N EELA+NL  +      +HGD+ Q ERN++I  FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD  FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK   +   GLG    E+P L  E    G+++   +      +TGA   RL+A+K AF++QY S F  A
Sbjct:   72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY--RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA 714

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|75061727|sp|Q5R7D1.1|DDX42_PONAB (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42)

HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0
Identity = 379/658 (57.60%), Postives = 482/658 (73.25%), Query Frame = 0

Query:   97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEE----SDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGG-SLATGA--GRLSAVKVAFKNQYMSKFRKA 747
            E  YF D+EE     +  DLPY PA  SP   Q       SDS++DPL+AFMA +E D   R + ++E           K +  +KG+R DI+E DD+E+Y++++ +NP AG   +E+E+++EYD +GNPI  T  K IDPLPPI+H++I Y  FEKNFYNEH +I  L+  Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM  IRKSE+TQPTPIQ QG+P  LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ  L  GDGPI +I+ PTREL  QI+ E K+FGK Y+L  V  YGGGS WEQ+K  ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI  HVRPDRQ  LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++  G  KWNWL   LVEF S+G+VL+FVTKK N EELA+NL  +      +HGD+ Q ERN++I  FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD  FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK   +   GLG    E+P L  E    G+++   +      +TGA   RL+A+K AF++QY S F  A
Sbjct:   72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPIDSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQETYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY--RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA 714

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|123796460|sp|Q810A7.3|DDX42_MOUSE (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42)

HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0
Identity = 375/663 (56.56%), Postives = 479/663 (72.25%), Query Frame = 0

Query:   97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEESDSEED----PLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKA 747
            E  YF D+EE     +  DLPY PA  SP   Q     ++ D    PL+AFMA +E D   R + ++E           K +  +KG+R DI+E DD+E+Y++++ +NP AG   +E+E+++EYD +GNPI   S K IDPLPPI+H++I Y  FEKNFYNEH +I  L+  Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM  IRKSE+TQPTPIQ QG+P  LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ  L  GDGPI +I+ PTREL  QI+ E K+FGK Y+L  V  YGGGS WEQ+K  ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI  HVRPDRQ  LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++  G  KWNWL   LVEF S+G+VL+FVTKK N EELA NL  +      +HGD+ Q ERN++I  FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD  FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK   +        ERPGLG  ++++ +  +    Y    A K   G++     RL+A+K AF++QY S F  A
Sbjct:   72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI-APSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENSDRGNNNNVMSNY---EAYKPSTGAMGD---RLTAMKAAFQSQYKSHFVAA 715

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|82194905|sp|Q5F485.1|DDX42_CHICK (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42)

HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0
Identity = 378/663 (57.01%), Postives = 485/663 (73.15%), Query Frame = 0

Query:   97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ----AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKA 747
            E  YF D+EE     +  DLPY PA  SP   Q    + +SDS++DPL+AFMA +E D   R + ++E       K  K A    KG+R DI+E DD+E+Y++++ +NP AG   +E+E+++EYD +GNPI   S K IDPLPPI+H++I+Y  FEKNFY+EH +I +L+  QV++L+ KL +++SGA PP+P +SFA FGFDE LM  IRKSE+TQPTPIQ QG+P  +SGRD+IGIAKTGSGKTAAF+WPML+HIMDQ  L  GDGPI +I+ PTREL  QI++E K+FGK Y+L  V  YGGGS WEQ+K  ++GAE+V+ TPGR+ID +K K TNL RV+YL+ DEADRMFDMGFE QVRSI  HVRPDRQ  LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V++   G  KWNWL   LVEF S+G+VL+FVTKK N EELA+NL  ++     +HGD+ Q ERN++I +FKKK  PILVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD  FAG LVRNLE ANQ V K+L++LAM++ WFR SRFK G+GK   +        ERPGLG  S+++ +       Y    A K   G++     RL+A+K AF++QY S F  A
Sbjct:   72 ENAYFEDEEED---NSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVE-DQAARDMKRLE----DKDKEKKNA----KGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI-APSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKPNIGGGGLGYRERPGLGSESSDRGNNNSVMSNY---EAYKPSSGAMGD---RLTAMKAAFQSQYKSHFVAA 715

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|122247124|sp|Q10MH8.1|RH24_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 24)

HSP 1 Score: 523.472 bits (1347), Expect = 3.564e-174
Identity = 273/563 (48.49%), Postives = 365/563 (64.83%), Query Frame = 0

Query:  134 DSEE-DPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDE-ESYYKWLEDN--------PNAGRNADE---------DENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVK-GNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSR 676
            D EE DPLDAFMA ++++++         ++                 RAD D+ DD  ES+ +  +D+         +AG ++DE         D   +EYD + NPI +   K I+P+PP++H+ I+Y+ F K+FY E   ++ +S  +V D  + L +++SG   P+P+ SFA  GF   LM  I K  + +PT IQ Q +P +LSGRD+IGIAKTGSGKTAAF+ PM+VHIMDQP L + +GPIG++  PTRELA QIY EAKKF K Y+L V   YGG SK++Q K  + G E+VIATPGR+ID+LKMK   + R +YL+LDEADRMFD+GFEPQ+RSI   +RPDRQ  LFSAT   ++ERLAR+ L DPI++  G VG A+ED+ QVV V+     K  WLL  L   +  G VL+F  KK   +E+   L+ +      +HGD  Q  R E +QKFK   + +LVATDVAARGLDI  I+TVVNFD+A+++D H HR+GRTGRAG K G AYTL+T+K+  FAG LV  L AA QDVP +LM+LAMK   FR++R
Sbjct:   64 DEEEIDPLDAFMAEIQEEIRAPPPAPKPEALR----------------RADSDDEDDPVESFLRAKKDSGLALAADAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDNPI-VVDKKKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKDGRFRANR 609

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|74896924|sp|Q54IV3.1|DDX42_DICDI (RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName: Full=DEAD box protein 42)

HSP 1 Score: 521.161 bits (1341), Expect = 1.601e-170
Identity = 273/564 (48.40%), Postives = 365/564 (64.72%), Query Frame = 0

Query:  124 SPGATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATK--KAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEY------------DEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFR 673
            S    Q E+ D E DPLDAFM N+            +A++ +S    K  + Q  +K  R DID  DDEE +YK  +       +  + ++D++Y            +E          + I+PLPPI+H+  +Y  F K FY EH DIA L+  QV ++++ L ++++G     PVTSF H+GFD+ L++ I K     PTPIQ Q IP  LSGRD+I IAKTGSGKTA F+WP + HIMDQP L +GDGPI L L PTRELA QIY E  K+ K + L     YGG SK +Q K  + G E+++ATPGR+IDM+K+K T L RVSYL+LDEAD+MFD GF PQV SI +HVRPDRQ  LFSATFK  +E  AR  L+DPIKI  G +G A+ D+TQ+V+V+     KWNWL + L   +S G+VLIFV+ K   E+L+ NL     +   +HGD +Q ER++ IQ FK+ +  IL+ATDVAARGLDIP I+ VVN+D +RDI++HTHR+GRTGRAG  G AYTL+T KD  F+  L++NLE+A+Q VP +L+++AM +  F+
Sbjct:  138 SDSKNQNEDEDDEIDPLDAFMENV----------NAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYKLRQKQLANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHSKEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVPPELIDVAMNNPHFK 691

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|75318047|sp|O22907.2|RH24_ARATH (RecName: Full=DEAD-box ATP-dependent RNA helicase 24)

HSP 1 Score: 506.523 bits (1303), Expect = 9.224e-168
Identity = 269/570 (47.19%), Postives = 357/570 (62.63%), Query Frame = 0

Query:  123 GSPGATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYK--------WLEDNPNAGRNADE---------DENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVK-GNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRS 674
            G   A    E D E DPLDAFM  + +++                K+    + + K  R   D+ D  ESY K           D  NAG N+DE         D   ++YD + NPI +   + I+P+  ++H+ I Y+   K+FY E   I+ ++  +  D +Q+LG+++SG    +PV +F   GF   +M  I+K  + +PT IQ Q +P +LSGRDVIGIAKTGSGKTAAF+ PM+VHIMDQP L R +GPIG+I  PTRELA QI+ EAKKF K Y L V   YGG SK EQ K  + G E+V+ATPGR+IDMLKMK   + R SYL+LDEADRMFD+GFEPQVRSI   +RPDRQ  LFSAT   ++E+LAR+ L+DPI++  G VG A+ED+TQVV V+     K  WLL  L   +  G VL+F +KK   +E+   L +   +   +HGD  Q  R E +QKFK     +L+ATDVAARGLDI  ++TVVN+D+A+D+D H HR+GRTGRAG + G AYTLVT+++  FAG LV +L AA Q+VP +L +LAMK   F+S
Sbjct:   65 GGSAAASGGEVD-EIDPLDAFMEGIHQEM----------------KSAPPPKPKEKLERYKDDDDDPVESYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPI-VVDKRKIEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKDGRFKS 616

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|81890303|sp|Q62780.1|DDX46_RAT (RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName: Full=DEAD box protein 46; AltName: Full=Helicase of 117.4 kDa)

HSP 1 Score: 414.846 bits (1065), Expect = 1.681e-129
Identity = 229/545 (42.02%), Postives = 323/545 (59.27%), Query Frame = 0

Query:  131 EESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTS------SKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKL-GVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKM---KVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665
            E  D E DPLDA+M  ++++V+K  +  V+    +  K+       +  V       D ++   + +E+          D++ +EY  E   ++L +      +K    L P++H  I+Y+ F KNFY E  ++A +S  +V   + ++ G+ + G   PKP+ S+   G    ++ +++K  + +PTPIQ Q IPA++SGRD+IGIAKTGSGKT AFL PM  HIMDQ  L  G+GPI +I+ PTRELALQI  E KKF K   L VVC YGG    EQ    ++GAE+++ TPGRMIDML     +VTNL RV+Y++LDEADRMFDMGFEPQV  I D+VRPDRQ  +FSATF R +E LAR  L+ PI++  G       DV Q V V++        LL  L  +  +G+V+IFV K+++ + L  +L      C  +HG + Q +R+ II  FK     +LVAT VAARGLD+ H+  VVN+      + + HR GRTGRAG KG AYT +TE    +AG +++ LE +   VP DL +L
Sbjct:  219 EMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMEN----------DQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF-LKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|85540944|sp|Q569Z5.2|DDX46_MOUSE (RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName: Full=DEAD box protein 46)

HSP 1 Score: 414.846 bits (1065), Expect = 1.772e-129
Identity = 229/545 (42.02%), Postives = 323/545 (59.27%), Query Frame = 0

Query:  131 EESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTS------SKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKL-GVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKM---KVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665
            E  D E DPLDA+M  ++++V+K  +  V+    +  K+       +  V       D ++   + +E+          D++ +EY  E   ++L +      +K    L P++H  I+Y+ F KNFY E  ++A +S  +V   + ++ G+ + G   PKP+ S+   G    ++ +++K  + +PTPIQ Q IPA++SGRD+IGIAKTGSGKT AFL PM  HIMDQ  L  G+GPI +I+ PTRELALQI  E KKF K   L VVC YGG    EQ    ++GAE+++ TPGRMIDML     +VTNL RV+Y++LDEADRMFDMGFEPQV  I D+VRPDRQ  +FSATF R +E LAR  L+ PI++  G       DV Q V V++        LL  L  +  +G+V+IFV K+++ + L  +L      C  +HG + Q +R+ II  FK     +LVAT VAARGLD+ H+  VVN+      + + HR GRTGRAG KG AYT +TE    +AG +++ LE +   VP DL +L
Sbjct:  219 EMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMEN----------DQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF-LKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752

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BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|340723638|ref|XP_003400196.1| (ATP-dependent RNA helicase DDX42 [Bombus terrestris] >gi|808137360|ref|XP_012170947.1| ATP-dependent RNA helicase DDX42 [Bombus terrestris])

HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 438/752 (58.24%), Postives = 547/752 (72.74%), Query Frame = 0

Query:   68 VSKHGYSSLTSIHASNMS-FQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPG------ATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGY-KWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLAT------GAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGVQPS-IQEQLMPPPFGINPPKASSPDLDGQPMPESGERRK-RKSRWE 803
            +SK GY ++ SI  + +S     P ++ +TEEEY     E +       L Y PAPGSP       +T  E+SDSEEDPLDAFMA ++ +V++   N  EA +    +  +K+    KG RADID  DDEESYY+++E+NP AG   +E + +I+YDE+GNPI     K IDPLPP++H++I+Y++FEKNFYN H++IA L+  Q+ DL++ LG+K+SG  PP PVTSF HFGFD+ L+K IRK+E+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ  L  GDGPIGLIL PTREL+ QIY EA+KFGKVY++ V C YGGGSKWEQSK  E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ  LFSATFK+R+E+LARD L DP++IVQG VGEA+ DVTQ V V +     KW WLL +LVEF+S+G++LIFVTKK N EELA+NL +KE +   +HGD+ Q ERN++I  FKKKE   LVATDVAARGLDIPHIRTVVN+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LAM+S+WFR SRFK G+GK   V   GLG     +P  +    +   S   KD+   +        G+ RLSA+K AF++QY S+FR +  ++        +PS I     P P   N  ++ + D+  Q     GER++ RKSRWE
Sbjct:   40 LSKQGYHTMNSITENALSACWGMPKKRSKTEEEY----FEDDDDPPPFSLEYIPAPGSPTYDWMKKSTSKEDSDSEEDPLDAFMAGIDAEVKR---NNYEAQLAEDERKEEKS----KGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIDYDEDGNPIAPPKKKDIDPLPPVDHSEIKYESFEKNFYNVHDEIANLNKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAGDGPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQNLVEFLSSGSLLIFVTKKLNAEELANNLKLKEFDVMLLHGDMDQIERNKVITAFKKKEVTTLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGFRG--RPETSSTSSSSSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS--SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKTQDI--QSTNIGGERKRVRKSRWE 774

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BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1227096013|gb|OXU20904.1| (hypothetical protein TSAR_012632 [Trichomalopsis sarcophagae])

HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0
Identity = 438/779 (56.23%), Postives = 546/779 (70.09%), Query Frame = 0

Query:   64 PTPGVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ-------AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELAL-----------QIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMAS-AEKPSLTHEQYTYGDSSAPKDLGGSLAT------GAGRLSAVKVAFKNQYMSKFRKAG--PTESDIGPAGV------------QPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKSRWE 803
            P  G SK GY ++ SI  S +S   AP ++ +TEEEYF+DD++   +   + L Y PAPGSP   +        E+SDSEEDPLDAFMA +E ++++          T +     + + + KG+RADID  DDEESYY+++E+NPNAG + D+ + +IEYDE+GNPI     K IDPLPPI+H+ I Y+ FEKNFYN H DIA L+  Q+ +L++ LG+K++G  PP PVTSF HFGFD+ L+K+IRK E+TQPTPIQAQ IP  LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ  L  GDGPIGLIL PTREL+            QIY EAKKFGKVY++ V C YGGGSKWEQSK  E GAE+V+ATPGR+ID++KMK TNL+RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ  LFSATFK+RIE+LARD+L DPI+IVQG VGEA+ DVTQ          KW WL  ++VE++S+G++LIFVTKK N EELA+NL +KE E   +HGD+ Q ERN++I  FKKK   ILVATDVAARGLDIPHIRTV+N+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LA++S+WFR SRFK G+GK   V   G G  S     + + +  +   SS  KD+   +        G+ RLSA+K AF++QY ++FR +     E  I P  V             PS    + PPP       A++ + D     +   +R RKSRWE
Sbjct:   54 PNSGFSKQGYHTMNSITESAISTWGAPKKRSKTEEEYFDDDDDTPTS---STLEYIPAPGSPSYEEHINKNKKKEDSDSEEDPLDAFMAGIESEIER----------TKAPSVEDRKEEKTKGIRADIDGEDDEESYYRYMEENPNAGLHLDDSDQEIEYDEDGNPIAPLKKKEIDPLPPIDHSVIPYEPFEKNFYNVHEDIANLNKQQIDELRKTLGIKVTGPAPPNPVTSFGHFGFDDSLIKSIRKHEYTQPTPIQAQSIPVALSGRDLIGIAKTGSGKTAAFVWPMLVHIMDQKELDSGDGPIGLILAPTRELSQQNAQYRVFQFSQIYHEAKKFGKVYNIRVCCCYGGGSKWEQSKALESGAEIVVATPGRIIDLVKMKATNLSRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRIEKLARDALTDPIRIVQGDVGEANTDVTQHNPT-----GKWTWLNQNIVEYLSSGSLLIFVTKKLNAEELANNLKLKEYEVLLLHGDMDQVERNKVITSFKKKTVSILVATDVAARGLDIPHIRTVINYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLALQSNWFRKSRFKSGKGKQVNVGGAGFGFRSKNSSSNQSDQSNSSASSSQSKDISDVVKKLERSGPGSDRLSAMKAAFRSQYNTQFRASSDHTWEQTITPPSVIMPPPPPPPPGGLPSAGMSMPPPPPPPGSEPANNKNADAAEAAKQERKRVRKSRWE 814

[Close]

BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1000764676|ref|XP_015605428.1| (PREDICTED: ATP-dependent RNA helicase DDX42 isoform X1 [Cephus cinctus] >gi|1000764678|ref|XP_015605429.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform X1 [Cephus cinctus])

HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0
Identity = 445/780 (57.05%), Postives = 551/780 (70.64%), Query Frame = 0

Query:   58 RQSFNNPTP----GVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSP-------GATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQ-VVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSL------ATGAGRLSAVKVAFKNQYMSKFRKAG--PTESDIGPAGVQPSIQEQLMPPPFGINPP-----KASSPDL---DGQPMPESG------ERRKRKSRWE 803
            R   N P P     +SK GY ++ +I  + +S     I K+R++ E   +  E +     + L Y PAPGSP          +  +SDSEEDPLDAFMA ++ +V+K   N  +A  T   +  +K +G     RADID  DDEESYY+++E+NP AG   +E + +IEYDE+GNPI     K IDPLP I+H++IQY+AFEKNFYN H +IA+L   Q+ +L++ LG+K++G  PP PVTSFAHF FD+ LMKTIRK+E+TQPTPIQAQ +P  LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ  L  GDGPIGLIL PTREL+ QIY EAKKFGKVY++ V C YGGGSKWEQSK  E GAE+V+ATPGRMID++KMK TNL+RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ  LFSATFK+R+E+LARD L DP++IVQG VGEA+ DVTQ V+   +    KW+WLL ++VE++SAG++LIFVTKK N EELA+NL +KE +   +HGD+ Q ERN++I  FKKKE  ILVATDVAARGLDIPHI+TVVN+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LAM+S+WFR SRFK G+GK   V   GLG     +P           S  PKD+   +        G+ RLSA+K AF++QY ++FR +     E  I PA V       +MPPP    PP      +S+ D+   DGQ     G       +R RKSRWE
Sbjct:   26 RSGANIPPPPQNSALSKQGYHTMNAITENALSACWG-IPKKRSKTE--EEYFEDDDEPPTSSLEYIPAPGSPTYDMMKKNDRKGRDSDSEEDPLDAFMAGIDAEVKK---NTFDAQFTEEERKEEKPKG----FRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKKDIDPLPSIDHSEIQYEAFEKNFYNVHEEIASLGKQQIEELRKTLGIKVTGPSPPNPVTSFAHFCFDDALMKTIRKNEYTQPTPIQAQAVPTALSGRDLIGIAKTGSGKTAAFIWPMLVHIMDQKELKHGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLSRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANTDVTQHVIMFHNNPAGKWSWLLHNIVEYLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQVERNKVITAFKKKEVSILVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKGLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGFRGRPEPPSGQSCGGS-SSQPPKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNTQFRASSDHTWEQTIQPASV-------IMPPP----PPVGLSANSSTEDVNSQDGQNSENPGNQEKVERKRVRKSRWE 783

[Close]

BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|936679971|ref|XP_014234294.1| (ATP-dependent RNA helicase DDX42 [Trichogramma pretiosum])

HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0
Identity = 450/834 (53.96%), Postives = 561/834 (67.27%), Query Frame = 0

Query:   14 RGGLYGAFVTSSDSNRPYRGAEIAPPTHLNSGRGGGMVNEAPRDRQSFNNPTPGVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPG----ATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVV--DLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSA------PKDLGG-------SLATGAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGVQPSIQEQLMPPPFGI---------------NPPK----------ASSPDLDGQPMPESGERRKRKSRWE 803
            RG  +  F  SS    P RG  I PPT                         PG+SK GY ++ +I  + +S       K R  EE    +   E  +  A L Y PAPGSP       + EESDSEEDPLDAFMA + ++++K          + +++  ++ + ++KGVR DID  D+EESYY+++E+NPNAG   ++ + +IEYDE+GNPI     K IDPLPPI+H+ I Y+ FEKNFY  H +I+ L+  QV DL++ LG+K++GA+PP PVTSF HFGFD+ L+K+IRK E+TQPTPIQAQ IP  +SGRD+IGIAKTGSGKTAAF+WPML+HIMDQ  L  GDGPIGLIL PTREL+ QIY EAKKFGKVY++ VVC YGGGSKWEQSK  E GAE+V+ATPGR+ID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ  LFSATFKRRIE+LARD L DPI+IVQG VGEA+ DVTQ V V   +L G KWNWL  +LVE++S+G+VLIFVTKK N EELA+NL +KE +   +HGD+ Q ERN++I  FK+KE  ILVATDVAARGLDIPHIRTV+N+D+ARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LA++SSWFR SRFK G+GK   V   G G   A+  +  ++ Y    S++      PK+L         S    + RLSA+K A+++QY S+FR +    SD           EQ + PP  I               N P+          +S+   D    P    +R RKSRWE
Sbjct:   14 RGFGFSGFQISST---PQRGVAIPPPT-----------------------IKPGISKQGYHTMNAISENALSINWNAATKPRKTEE----EYFDEDDEPSASLEYIPAPGSPSYDKHKKKKEESDSEEDPLDAFMAGINEEIKK----------SKTTEGEERKEEKMKGVRTDIDTEDNEESYYRYMEENPNAGLQGEDSDQEIEYDEDGNPIAPPKKKEIDPLPPIDHSLISYEPFEKNFYIVHEEISQLNRQQVDDLKKTLGIKVTGAMPPNPVTSFGHFGFDDSLIKSIRKHEYTQPTPIQAQAIPTAMSGRDLIGIAKTGSGKTAAFIWPMLIHIMDQKELEEGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIRVVCCYGGGSKWEQSKALEGGAEIVVATPGRLIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKRRIEKLARDILTDPIRIVQGDVGEANTDVTQNVLVFYNNLLG-KWNWLNHNLVEYLSSGSVLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERNKVITAFKRKEVNILVATDVAARGLDIPHIRTVINYDIARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLALQSSWFRKSRFKSGKGKQVNVGGAGFGF-RAKSSNSNYDNYQSSSSASTSEPYRPKELAEVVKKIERSSGPCSDRLSAMKAAYRSQYNSQFRAS----SD--------HTWEQTITPPSVIMPPPPPPPTGSMTSDNKPQWGAMPPPPPSSSNESKDSDEGPRQERKRARKSRWE 793

[Close]

BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1059868160|ref|XP_017788806.1| (PREDICTED: ATP-dependent RNA helicase DDX42 [Habropoda laboriosa] >gi|1059868162|ref|XP_017788807.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Habropoda laboriosa] >gi|1059868164|ref|XP_017788808.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Habropoda laboriosa] >gi|1059868166|ref|XP_017788809.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Habropoda laboriosa] >gi|915664243|gb|KOC66412.1| ATP-dependent RNA helicase DDX42 [Habropoda laboriosa])

HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 436/751 (58.06%), Postives = 544/751 (72.44%), Query Frame = 0

Query:   68 VSKHGYSSLTSIHASNMS-FQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAE------ESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGY-KWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLAT------GAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGVQPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRK-RKSRWE 803
            +SK GY ++ SI  + +S     P ++ +TEEEY     E +       L Y PAPGSP     +      +SDSEEDPLDAFMA ++ +V++   N  EA +    +  +K+    KG RADID  DDEESYY+++E+NP AG   +E + +IEYDE+GNPI     K IDPLPPI+H++I Y++FEKNFYN H++IA+LS  Q+ DL++ LG+K+SG  PP PVTSF HFGFD+ L++ +RK+E+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ  L  GDGPIGLIL PTREL+ QIY EA+KFGKVY++ V C YGGGSKWEQSK  E GAE+V+ATPGRMID++KMK TNLARV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ  LFSATFK+R+E+LARD L DP++IVQG VGEA+ DVTQ   V +     KW+WLL +LVEF+SAG++L+FVTKK N EELA+NL +KE +   +HGD+ Q ERN++I  FKKKE   LVATDVAARGLDIPHIRTVVN+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LAM+S+WFR SRFK G+GK   V   GLG     +P  +        S   KD+   +        G+ RLSA+K AF++QY S+FR +  ++        +PS+     PP       + S  + D Q +   GER++ RKSRWE
Sbjct:   40 LSKQGYHTMNSITENALSACWGMPKKRSKTEEEY----FEDDDDPPPFSLEYIPAPGSPTYDWTKKSAPKGDSDSEEDPLDAFMAGIDAEVKR---NNYEAQLAEDERKEEKS----KGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKKEIDPLPPIDHSEIHYESFEKNFYNVHDEIASLSKQQIDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIRAVRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQTELKAGDGPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLARVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANTDVTQHAIVFNNNPTGKWSWLLQNLVEFLSAGSLLVFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERNKVITAFKKKEVSTLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGFRG--RPDTSSTSSGGSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS--SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKNE-DNQAVNTGGERKRVRKSRWE 774

The following BLAST results are available for this feature:

BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
BLAST of atp-dependent rna helicase ddx42-like vs. nr

BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011452	0.000e+0	63.95	supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1...	[more]
EMLSAG00000011390	2.989e-119	38.93	supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1...	[more]
EMLSAG00000011189	1.150e-101	41.86	supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1...	[more]
EMLSAG00000005110	1.244e-89	37.58	supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1...	[more]
EMLSAG00000010143	8.458e-89	41.78	supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1...	[more]
EMLSAG00000004918	7.261e-88	40.88	supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989...	[more]
EMLSAG00000002581	1.471e-81	38.53	supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803...	[more]
EMLSAG00000008048	3.904e-81	38.61	supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1...	[more]
EMLSAG00000002458	5.246e-80	37.58	supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 ...	[more]
EMLSAG00000001805	5.524e-74	38.83	supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1...	[more]

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BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|82209788\|sp\|Q7ZY47.1\|DDX42_XENLA	0.000e+0	54.15	RecName: Full=ATP-dependent RNA helicase DDX42; Al...	[more]
gi\|74750541\|sp\|Q86XP3.1\|DDX42_HUMAN	0.000e+0	57.60	RecName: Full=ATP-dependent RNA helicase DDX42; Al...	[more]
gi\|75061727\|sp\|Q5R7D1.1\|DDX42_PONAB	0.000e+0	57.60	RecName: Full=ATP-dependent RNA helicase DDX42; Al...	[more]
gi\|123796460\|sp\|Q810A7.3\|DDX42_MOUSE	0.000e+0	56.56	RecName: Full=ATP-dependent RNA helicase DDX42; Al...	[more]
gi\|82194905\|sp\|Q5F485.1\|DDX42_CHICK	0.000e+0	57.01	RecName: Full=ATP-dependent RNA helicase DDX42; Al...	[more]
gi\|122247124\|sp\|Q10MH8.1\|RH24_ORYSJ	3.564e-174	48.49	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|74896924\|sp\|Q54IV3.1\|DDX42_DICDI	1.601e-170	48.40	RecName: Full=Probable ATP-dependent RNA helicase ...	[more]
gi\|75318047\|sp\|O22907.2\|RH24_ARATH	9.224e-168	47.19	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81890303\|sp\|Q62780.1\|DDX46_RAT	1.681e-129	42.02	RecName: Full=Probable ATP-dependent RNA helicase ...	[more]
gi\|85540944\|sp\|Q569Z5.2\|DDX46_MOUSE	1.772e-129	42.02	RecName: Full=Probable ATP-dependent RNA helicase ...	[more]

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BLAST of atp-dependent rna helicase ddx42-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|340723638\|ref\|XP_003400196.1\|	0.000e+0	58.24	ATP-dependent RNA helicase DDX42 [Bombus terrestri...	[more]
gi\|1227096013\|gb\|OXU20904.1\|	0.000e+0	56.23	hypothetical protein TSAR_012632 [Trichomalopsis s...	[more]
gi\|1000764676\|ref\|XP_015605428.1\|	0.000e+0	57.05	PREDICTED: ATP-dependent RNA helicase DDX42 isofor...	[more]
gi\|936679971\|ref\|XP_014234294.1\|	0.000e+0	53.96	ATP-dependent RNA helicase DDX42 [Trichogramma pre...	[more]
gi\|1059868160\|ref\|XP_017788806.1\|	0.000e+0	58.06	PREDICTED: ATP-dependent RNA helicase DDX42 [Habro...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold907_size82601	supercontig	scaffold907_size82601:79249..81794 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold907_size82601-processed-gene-0.19-mRNA-1	snap_masked-scaffold907_size82601-processed-gene-0.19-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold907_size82601:79249..81794-

gene from alignment at scaffold907_size82601:79249..81794-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold907_size82601-processed-gene-0.19 ID=snap_masked-scaffold907_size82601-processed-gene-0.19|Name=atp-dependent rna helicase ddx42-like|organism=Tigriopus kingsejongensis|type=gene|length=2546bp|location=Sequence derived from alignment at scaffold907_size82601:79249..81794- (Tigriopus kingsejongensis)
GCCAATTGTGCCCAGGCGAACCAAAACAATCCTCCAACCTACGACGCGTT
TCGAGGCCCGGCCAAGATGAGGCGCGGTTCCTTTGGACGTAGTGGCGCCA
GTGGGCGGGGAGGCCTCTACGGCGCCTTCGTGACCTCCTCCGACTCGAAT
CGACCCTATCGGGGAGCGGAAATTGCACCGCCCACCCACCTGAATTCGGG
GCGCGGGGGTGGCATGGTCAATGAAGCCCCGCGGGATCGACAGAGCTTCA
ACAATCCCACTCCGGGGGTGAGCAAGCACGGGTAAGACAACTGCCCGAGG
TGGCTCCTCTTGCCTGCTGGGCTAATGTGAGTTTCACGCTCGTCTTCAGC
TATTCCAGCCTCACTTCCATCCATGCCTCGAACATGAGCTTTCAAGAGGC
GCCAATTCGGAAGCAGAGGACAGAGGAGGAGTACTTCAACGACGACGAGG
AGGCCGAGGCCGCCCAGGCCGAGGCTGATCTGCCCTATCAACCGGCTCCG
GGCTCGCCGGGCGCGACTCAGGCCGAGGAGTCGGATTCGGAGGAGGATCC
CCTGGACGCCTTCATGGCCAATCTGGAGAAGGACGTTCAGAAGCGAGGTC
TGAACAAGGTCGAGGCCTCGGTCACCTCGTCCTCCAAGGCCACCAAGAAG
GCCCAAGGCGAGATCAAGGGCGTCCGAGCCGATATTGACGAGGCCGACGA
CGAGGAGTCTTACTACAAATGGCTCGAGGACAATCCCAATGCCGGTCGCA
ATGCGGATGAGGACGAGAACGACATCGAGTACGACGAGGAGGGCAATCCC
ATCAACTTGACCTCGAGCAAGTACATCGATCCCCTCCCGCCCATTAACCA
CAACGACATCCAGTACGACGCCTTTGAGAAGAACTTCTACAACGAGCACA
ACGACATTGCCACCTTGAGCAACATCCAGGTCATGGATCTGCAGCAAAAG
CTGGGCGTCAAGATATCCGGCGCCATTCCGCCCAAGCCCGTGACCAGTTT
TGCTCATTTCGGCTTCGACGAGCCGCTGATGAAGACCATTCGCAAGTCCG
AGTTCACTCAGCCCACGCCCATTCAAGCCCAGGGCATTCCGGCCCTCTTG
AGTGGGCGTGACGTCATCGGGATCGCCAAGACGGGCTCGGGCAAGACGGC
TGCGTTCCTCTGGCCCATGTTGGTCCACATCATGGACCAGCCGCCTCTGG
TGCGCGGGGATGGTCCCATCGGACTCATCCTCGTCCCCACCCGCGAGCTG
GCCCTCCAAATCTACACCGAGGCCAAGAAATTCGGCAAAGTCTACGACCT
CAACGTGGTCTGCGCCTACGGCGGCGGCTCCAAGTGGGAACAGTCCAAGG
GCTTCGAGAAGGGGGCTGAGCTCGTGATCGCCACCCCCGGGCGGATGATC
GACATGCTCAAGATGAAGGTGACCAATCTGGCGCGGGTCAGCTACCTCAT
CCTGGACGAGGCGGATCGGATGTTCGACATGGGCTTCGAGCCACAGGTGC
GGTCCATCTGCGACCACGTGCGGCCGGATCGGCAGTGCGGGCTGTTCAGT
GCCACCTTCAAGCGGCGGATCGAGCGGCTGGCCCGGGACTCGCTCAACGA
TCCCATCAAGATCGTCCAGGGCTCGGTGGGCGAGGCCTCTGAGGACGTCA
CCCAGGTGGTCAAGGTCGTGGATCTGGGCGGCTACAAGTGGAACTGGCTC
CTGAGCAGCCTCGTCGAGTTCATGTCCGCGGGCACGGTGCTCATCTTCGT
GACCAAGAAGCAGAACTGCGAGGAGCTAGCCCACAACCTCCACATCAAGG
AGATCGAGTGTCGCTGCATCCACGGGGATCTCCACCAACAGGAGCGCAAC
GAGATCATTCAGAAGTTCAAGAAGAAAGAGTTTCCCATCCTCGTGGCCAC
CGACGTGGCGGCCCGAGGGCTCGACATCCCCCACATCAGGACCGTGGTCA
ATTTCGACGTGGCCCGCGACATCGACACCCACACCCACCGTGTGGGTCGG
ACCGGGCGAGCCGGCGTGAAGGGCAACGCCTACACCTTGGTCACGGAGAA
GGACAAGGAATTCGCCGGCCACCTCGTGCGCAACCTGGAGGCGGCCAACC
AGGACGTGCCCAAAGATCTCATGGAGCTGGCCATGAAGAGCTCCTGGTTC
CGGAGCTCGCGCTTCAAGCGAGGCCGCGGCAAGGGCTGTCTGGTGGAGCG
ACCCGGTCTGGGCATGGCCTCGGCCGAGAAGCCCTCCCTCACTCACGAGC
AATACACCTACGGGGACTCCTCGGCTCCCAAGGACCTGGGCGGCTCGTTG
GCCACCGGGGCCGGCCGACTCTCGGCCGTCAAGGTAGCCTTCAAGAACCA
GTACATGTCGAAATTCCGCAAGGCCGGCCCCACCGAGAGCGACATCGGAC
CGGCCGGAGTGCAGCCCTCGATCCAGGAGCAACTCATGCCCCCACCCTTT
GGGATCAACCCGCCCAAGGCCTCGAGCCCAGACCTGGATGGCCAGCCCAT
GCCGGAGAGTGGGGAGAGACGGAAACGGAAGTCGAGATGGGAGTAA

Synonyms

The feature 'atp-dependent rna helicase ddx42-like' has the following synonyms


Synonym
Tk01571

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