atp-dependent rna helicase ddx42-like, snap_masked-scaffold907_size82601-processed-gene-0.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12") HSP 1 Score: 232.646 bits (592), Expect = 6.504e-66 Identity = 135/382 (35.34%), Postives = 210/382 (54.97%), Query Frame = 0 Query: 288 SFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQP--PLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVT-NLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQ-VVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLE--AANQDVPKDLM 663 SF PL+K I + PTPIQA IP L+GRDV G A TG+GKTA ++ P+L ++ +P + R ++LVPTREL +Q+Y +K+ + +++ + GG Q K ++VIATPGR+ID +K T L + LILDEADRM D F Q++ I P RQ LFSAT ++ L+ +L P+KI S + ++ Q V++ +L++LV ++F+ K C L L + + +HG+L Q +R E ++KFK++E +L+ TDVAARGLDI ++TV+N+ + ++ + HRVGRT RAG G + ++ E D++ +V+N + VP+D++ Sbjct: 183 SFYAMXLSRPLLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILERLLFRPNQSITRV-----IVLVPTRELGVQVYQVSKQLSQFTSIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDRKMVREIVKNARDPVKARTVPQDII 559
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 218.779 bits (556), Expect = 2.374e-63 Identity = 134/360 (37.22%), Postives = 198/360 (55.00%), Query Frame = 0 Query: 287 TSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMID-MLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHV--RPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEF 643 T+F+ G E L + + P+ IQ + IP L+GRD+IG+A+TGSGKTAAF P+L ++++P L+L PTRELA QI + +K GK + V GG Q+ K ++IATPGR+ID M K +L + YLI+DEADR+ +M FE +V I + R+ LFSAT +++ +L R SL DP+++ S + + + Q + L YK +L+ + E ++ + +IF + +LA L ++G + Q +R + KFK K IL+ATDVA+RGLDIPH+ V+N+D+ + HRVGRT RAG G A T V + D E Sbjct: 24 TTFSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRF-----FALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLK-YKEMYLVHIINE-LAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVEL 376
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000012967 (supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:1 gene:EMLSAG00000012967 transcript:EMLSAT00000012967 description:"maker-LSalAtl2s98-augustus-gene-12.20") HSP 1 Score: 190.274 bits (482), Expect = 5.141e-51 Identity = 118/351 (33.62%), Postives = 176/351 (50.14%), Query Frame = 0 Query: 289 FAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGD--GPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSA-GTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLV 636 F G + + I+K + PTPIQ + IP +L GRDV+G+A+TGSGKT AFL P+L L G+ P +IL PTREL+LQ K+ K L + GG S +Q G +++IATPGR + + L + Y++ DEADR+F++GF Q++ I + DRQ LFSAT + + A+ LNDP +V+ V + + + K L+ L + ++ ++F+ + + E + L EI I+ L R KF + +L+ TD+AARG+DIP + V+N+ HRVGR RAG G A + V Sbjct: 33 FQSMGLSREVFRGIQKKGYKVPTPIQRKTIPLILEGRDVVGMARTGSGKTGAFLIPLL------EKLCSGNRGKPRAMILSPTRELSLQTLRFFKELAKFSGLKAMSILGGESMEKQFAGMHNNPDVLIATPGRFVHLCVEMNLRLDAIQYVVFDEADRLFELGFGEQLKEILGRLSDDRQTLLFSATLPKLLVEFAKAGLNDPT-LVRLDVDTKIPETLSLAFISCRDEGKPALLVHILQKLIAKEEQTIVFLATRHHVEYIHLLLDSAEISNTYIYSQLDPSARKINTAKFTSNQCSVLLVTDLAARGIDIPLLDNVINYHFPAKSKLFIHRVGRVARAGRSGLAISFV 376
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000012740 (supercontig:LSalAtl2s:LSalAtl2s967:89676:95604:1 gene:EMLSAG00000012740 transcript:EMLSAT00000012740 description:"augustus_masked-LSalAtl2s967-processed-gene-0.13") HSP 1 Score: 185.267 bits (469), Expect = 1.681e-50 Identity = 127/406 (31.28%), Postives = 215/406 (52.96%), Query Frame = 0 Query: 269 LQQKLGVKISGAIPPKPVTSFAHFG--FDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLK-MKVTNLARVSYLILDEADRMFD----MGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKW-NWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNL-HIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665 L++ LG+++ G P P+T++ E L++ + S + PTPIQAQ IP +L GRDV+G A TGSGKTAA+L P+LV+ + +IL PTREL+ QI+ EA K + Y + SK +GA ++I+TP ++ ++K +L + +LI+DE+D++F+ F Q+ + ++ FSAT +E + +L++ + + G +A +DV Q +V G K N+ L++L+ VLIFV + +EL L K+I+ IH +R + I+ F+ +L+ T++ +RG+D+ + V+N+D ++ HRVGRTGRAG G A T T+ DK + + + ++ +VP+ +++L Sbjct: 48 LRKTLGIRVQGKDVPDPLTNWWDLSGSLPEGLIEMV-SSLYPNPTPIQAQSIPIMLQGRDVLGSAPTGSGKTAAYLLPILVN-------QEKNKLKTIILCPTRELSHQIHQEALKL-------IPPNYQTKVQVASSKKSNQGANVLISTPNTLVYLIKDGSSLDLKSLEWLIVDESDKLFEDKGKASFREQLAVVYKACMSSKK-AFFSATLATDVENWCKTNLDNAVSVTIGIRNKACKDVKQ--SLVYTGSEKGKNYALTNLINDGIKPPVLIFVQDFERADELKEILTKQKKIKAEVIHSHRSLLQREDAIKTFRAGRTWVLICTELMSRGIDVKGVNLVINYDFPPSTVSYIHRVGRTGRAGRPGRAVTFFTDDDKVLLRSIAQIVSSSGNNVPEFMLKL 435
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12") HSP 1 Score: 181.415 bits (459), Expect = 1.694e-50 Identity = 110/355 (30.99%), Postives = 180/355 (50.70%), Query Frame = 0 Query: 286 VTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKD 640 + +F G E L++ I F +P+ IQ + I +L GRDVI A++G+GKTA F +L I +R L+L PTRELA+QI G ++ GG + E + + G +V TPGR+ DM++ + + L+LDEAD M + GF+ Q+ + ++ P Q L SAT I + + DPI+I+ E Q V+ +K++ L L + ++ +IF K+ + L + +HGD+ Q+ER+ I+++F+ + +L+ TDV ARG+D+ + V+N+D+ + + + HR+GR+GR G KG A V D Sbjct: 27 IPTFDSMGLREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSI---DTTMRETQ--CLVLSPTRELAVQIQKVLLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADPIRILVKRDELTLEGXKQFFVAVEREEWKFD-TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDD 375
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33") HSP 1 Score: 181.8 bits (460), Expect = 5.113e-48 Identity = 126/370 (34.05%), Postives = 193/370 (52.16%), Query Frame = 0 Query: 283 PKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMID-MLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPI--KIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNC------EELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFP-ILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKE 642 PK + F +K ++++ + +PT IQ + I G DV+G AKTG GKT AF+ P+L ++ + + DG L++ PTRELA QI+ +K GK ++ + GG ++K +VI TPGR++ M + + + L+LDEADR D+GF + +I ++ +RQ LFSAT R I+ L R SL +P+ I + S E +TQ V +L K + LLS + + T L+FV Q+C +EL + + + ++G LHQ R I ++F ++E +L ATD+AARGLD P + V D D T+ HRVGRT R G + L+T ++E Sbjct: 98 PKSIKHFRDMPLSAYTLKGLKENNYDEPTQIQKESIGLCFRGSDVLGAAKTGCGKTLAFVIPIL-ELLHREKWTKLDGLGALVITPTRELAYQIFETLRKVGKHHEFSAGLVIGGKDLQYETKRLS-TCNIVICTPGRLLQHMDENPQFDPITLQILVLDEADRCLDLGFAETMNAILGNLPKERQTLLFSATQTRSIKDLGRLSLKNPVYVSIHEHSKFSTPEKLTQNYMVCELDK-KMDMLLSFIKSHRKSKT-LVFV---QSCKQARYFQELLKKIRVG-VSVLGLYGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLTPSEEE 459
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000002659 (supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1 gene:EMLSAG00000002659 transcript:EMLSAT00000002659 description:"maker-LSalAtl2s153-augustus-gene-5.7") HSP 1 Score: 174.481 bits (441), Expect = 1.827e-46 Identity = 133/405 (32.84%), Postives = 210/405 (51.85%), Query Frame = 0 Query: 279 GAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLAR-VSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLN-DPIKIVQGSVGEASEDVTQVVKVVDLG-----GYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRA-GVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSS 675 G + K TS D L I+ F+Q T IQAQ IP LL GRD++G AKTGSGKT +FL P V ++ + + +G +I+ PTREL++Q + ++ K + GG ++ +++ KG +V+ATPGR++D L+ L + + LI+DEADR+ D+GFE +++ I + RQ LFSAT ++ E L + +L +PI I + A+++ V ++ G K LL + ++ V++F + + + + ++ + IHG Q +R +F + IL+ TDVAARGLDIP + +V +D D + HRVGRT R G KG+A ++ ++ F +R L AN VP + E SW + S Sbjct: 112 GILSDKSFTSLKEHICDNTL-NGIQDMGFSQMTEIQAQTIPHLLEGRDLVGAAKTGSGKTLSFLIPA-VELIYKLKFMPRNGTGVIIISPTRELSMQTFGVLRELLKYHCHTYGLVMGGANRNTEAQKLNKGINIVVATPGRLLDHLRNTKDFLYKNLQCLIIDEADRILDVGFEEEMKKIIQLLPKKRQTMLFSATTTKKTEDLVKLALKKEPIYI---GIDSANDNGAATVSGLEQGYVICPSEKRLLLLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVQSIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPDVDWIVQYDPTDDPKEYIHRVGRTARGEGGKGHALLILRPEEVGF----LRYLRQAN--VPLNEFEF----SWSKVS 501
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000000249 (supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 gene:EMLSAG00000000249 transcript:EMLSAT00000000249 description:"maker-LSalAtl2s1036-augustus-gene-0.32") HSP 1 Score: 169.859 bits (429), Expect = 4.494e-46 Identity = 111/373 (29.76%), Postives = 180/373 (48.26%), Query Frame = 0 Query: 289 FAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEAS-EDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPK 660 F F + I + + +P+PIQ IP LSGRD++ AK G+GKT A+ P+L I +++G +I+VPTRELALQ + K ++ V+ GG + E + LV+ATPGR++D+++ V + + LDEAD++ F+ + + +H+ RQ L SATF +E + + P ++ + E + + +TQ V + L++L + +IF Q E LA + C IH + Q RN + F+ LV +D+ RG+DI + V+NFD + +T+ HR+GR+GR G G A L+T D+ + L + +PK Sbjct: 53 FEDFCLKRETLMGIFEKGWEKPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPILEQIDPSNDVIQG-----MIIVPTRELALQTSQICIELSKHRNVKVMVTTGGTNLKEDIMRIYEKVHLVVATPGRILDLIEKGVAKVMNCKVICLDEADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPYEV--NLMDELTLKGITQYYAFVQ--ERQKVHCLNTLFTKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFLLHRIEGELGTEIKPIPK 416
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000009885 (supercontig:LSalAtl2s:LSalAtl2s643:195185:200626:1 gene:EMLSAG00000009885 transcript:EMLSAT00000009885 description:"maker-LSalAtl2s643-augustus-gene-2.22") HSP 1 Score: 166.392 bits (420), Expect = 1.062e-44 Identity = 92/257 (35.80%), Postives = 144/257 (56.03%), Query Frame = 0 Query: 411 AELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDH----VRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEK---DKEFAGHLVRNLEAANQDVPK 660 +++IATPGR++D++ +L V + +LDEADRM DMGF P+V+ I + RQ +FSATF ++ A + LND + + G VG + DV Q V+ +K L +++ + L+FV K+N + LA L + IHGD Q +R + + F+ ++P+LV+T VAARGLDI + VVN+D+ + +D + HRVGRTGR G KG A + D+ A L++ L + ++P+ Sbjct: 166 VDILIATPGRLLDLVSKGAVSLDAVQFFVLDEADRMLDMGFLPEVKRIVSEGNMCCKTSRQTLMFSATFPYEVQSCAAEFLNDYVFVTVGIVGGVNTDVKQDFYQVE--KFKKRQKLKDILDDVGTLKTLVFVETKKNTDFLASWLSENNVPTTSIHGDRLQSQREQALADFRSGKYPVLVSTAVAARGLDIKGVEHVVNYDLPKTVDEYVHRVGRTGRVGNKGKATSFYDGNEPMDRTLAHELLKVLREGDIEIPE 420
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Match: EMLSAG00000006912 (supercontig:LSalAtl2s:LSalAtl2s391:287461:291724:1 gene:EMLSAG00000006912 transcript:EMLSAT00000006912 description:"maker-LSalAtl2s391-augustus-gene-3.7") HSP 1 Score: 164.081 bits (414), Expect = 2.627e-44 Identity = 114/381 (29.92%), Postives = 183/381 (48.03%), Query Frame = 0 Query: 288 SFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTV---LIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665 SF E L++ I F +P+ IQ + I + RD I A++G+GKTA F +L Q + + LIL PTRELA QI G GG S + E G +V+ TPGR+ DM+ + + +LDEAD M GF+ Q+ + H+ D Q L SAT + + + + DPI+I+ E + Q V+ K W LS+L + T+ +IF ++ L + +K +HG++ Q+ER I+++F+ +L+ TD+ ARG+D+ I V+N+D+ + + + HR+GR GR G KG A +TE D+ + ++ +++PKD+ L Sbjct: 41 SFDDMNLKEDLLRGIYSFGFEKPSAIQQRAIVPCIKTRDAIAQAQSGTGKTATFSIAIL-----QKIDISMNRTQALILAPTRELAQQIQKVVLSLGDFLKATCYACIGGRSISSDIRALEHGPHIVVGTPGRVFDMITREHLRTENIKMFVLDEADEMLSRGFKEQIYDVFRHLNQDIQVVLMSATMPDDVLDVTKRFMRDPIRILVRKEELTLEGILQFYVFVE----KEEWKLSTLCDLYETLTITQAVIFCNTRRKVCWLTEKMGLKHFTVSSMHGEMSQEEREVIMREFRSGSSRVLITTDLLARGIDVQQISLVINYDLPVNKENYIHRIGRGGRFGRKGVAINFITEGDRMALQDIEKHYHTQIEEMPKDVANL 412
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|82209788|sp|Q7ZY47.1|DDX42_XENLA (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42) HSP 1 Score: 744.577 bits (1921), Expect = 0.000e+0 Identity = 385/711 (54.15%), Postives = 498/711 (70.04%), Query Frame = 0 Query: 66 PGVSKHGYSSLTSIHASNM----SFQEAPIRKQRTEEE--YFNDDEEAEAAQAEADLPYQPAPGSPGATQAE---ESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGV 759 P VS + S +S + S SF + ++ +EE YF+D+EE + DLPY PA SP Q +SDSEEDPL+AFMA +E D + + K+E K + +G+R DI+E DD+E+Y++++ +NP AG +E+E+++EYD +GNPI T+ + IDPLPPI+H +I+Y FEKNFY EH I + + Q+ +L+ KL +++SGA PP+ +SFAHFGFDE L+ IRKSE+TQPTPIQ QGIP LSGRD+IGIAKTGSGKTAAF+WP+LVHIMDQ L DGPI +I+ PTREL QI++E K+FGK Y+L V YGGGS WEQ+K ++GAE+V+ TPGR+ID +K K TNL RV+YL+ DEADRMFDMGFE QVRSI +HVRPDRQ LFSATF+++IE+LARD L DPI++VQG +GEA+ED+TQVV+++ G KW WL LVEF S G+VL+FVTKK N EELA NL + +HGD+ Q ERN++I FKKK P+LVATDVAARGLDIP I+TVVN+DVARDIDTHTHR+GRTGRAG KG AYTL+T K+ FAG LVRNLE ANQ V K+L++LAM++SWFR SRFK G+GK + ERPGLG S+E + + Y A K GG++ RLSA+K AF++QY + F A + G + + Sbjct: 32 PQVSHSAFQSASSKYGSTSNQLPSFYKIGSKRANFDEENSYFDDEEED---SSNVDLPYIPAENSPTRQQLRSKTDSDSEEDPLEAFMAEVE-DQAAKDMRKLEER--------DKEKANARGIRDDIEEEDDQEAYFRYMAENPTAGLVPEEEEDNLEYDSDGNPIAPTTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRLVEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSERNKVISDFKKKSIPVLVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKESNFAGDLVRNLEGANQYVSKELLDLAMQNSWFRKSRFKAGKGKKLNIGGGGLGYRERPGLGAESSEHGTGGNVMSNY---EAFKPSGGAMGD---RLSAMKSAFQSQYKNHFVAASASTQKTGTSSI 724
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|74750541|sp|Q86XP3.1|DDX42_HUMAN (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42; AltName: Full=RNA helicase-like protein; Short=RHELP; AltName: Full=RNA helicase-related protein; Short=RNAHP; AltName: Full=SF3b DEAD box protein; AltName: Full=Splicing factor 3B-associated 125 kDa protein; Short=SF3b125) HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0 Identity = 379/658 (57.60%), Postives = 482/658 (73.25%), Query Frame = 0 Query: 97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEE----SDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGG-SLATGA--GRLSAVKVAFKNQYMSKFRKA 747 E YF D+EE + DLPY PA SP Q SDS++DPL+AFMA +E D R + ++E K + +KG+R DI+E DD+E+Y++++ +NP AG +E+E+++EYD +GNPI T K IDPLPPI+H++I Y FEKNFYNEH +I L+ Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM IRKSE+TQPTPIQ QG+P LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ L GDGPI +I+ PTREL QI+ E K+FGK Y+L V YGGGS WEQ+K ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI HVRPDRQ LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++ G KWNWL LVEF S+G+VL+FVTKK N EELA+NL + +HGD+ Q ERN++I FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK + GLG E+P L E G+++ + +TGA RL+A+K AF++QY S F A Sbjct: 72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY--RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA 714
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|75061727|sp|Q5R7D1.1|DDX42_PONAB (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42) HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0 Identity = 379/658 (57.60%), Postives = 482/658 (73.25%), Query Frame = 0 Query: 97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEE----SDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGG-SLATGA--GRLSAVKVAFKNQYMSKFRKA 747 E YF D+EE + DLPY PA SP Q SDS++DPL+AFMA +E D R + ++E K + +KG+R DI+E DD+E+Y++++ +NP AG +E+E+++EYD +GNPI T K IDPLPPI+H++I Y FEKNFYNEH +I L+ Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM IRKSE+TQPTPIQ QG+P LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ L GDGPI +I+ PTREL QI+ E K+FGK Y+L V YGGGS WEQ+K ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI HVRPDRQ LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++ G KWNWL LVEF S+G+VL+FVTKK N EELA+NL + +HGD+ Q ERN++I FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK + GLG E+P L E G+++ + +TGA RL+A+K AF++QY S F A Sbjct: 72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPIDSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQETYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY--RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA 714
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|123796460|sp|Q810A7.3|DDX42_MOUSE (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42) HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0 Identity = 375/663 (56.56%), Postives = 479/663 (72.25%), Query Frame = 0 Query: 97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEESDSEED----PLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKA 747 E YF D+EE + DLPY PA SP Q ++ D PL+AFMA +E D R + ++E K + +KG+R DI+E DD+E+Y++++ +NP AG +E+E+++EYD +GNPI S K IDPLPPI+H++I Y FEKNFYNEH +I L+ Q++DL+ KL +++SGA PP+P +SFAHFGFDE LM IRKSE+TQPTPIQ QG+P LSGRD+IGIAKTGSGKTAAF+WPML+HIMDQ L GDGPI +I+ PTREL QI+ E K+FGK Y+L V YGGGS WEQ+K ++GAE+V+ TPGR+ID +K K TNL RVSYL+ DEADRMFDMGFE QVRSI HVRPDRQ LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V+++ G KWNWL LVEF S+G+VL+FVTKK N EELA NL + +HGD+ Q ERN++I FKKK+ P+LVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD FAG LVRNLE ANQ V K+L++LAM+++WFR SRFK G+GK + ERPGLG ++++ + + Y A K G++ RL+A+K AF++QY S F A Sbjct: 72 ENAYFEDEEED---SSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVE-DQAARDMKRLEEK--------DKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI-APSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENSDRGNNNNVMSNY---EAYKPSTGAMGD---RLTAMKAAFQSQYKSHFVAA 715
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|82194905|sp|Q5F485.1|DDX42_CHICK (RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42) HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0 Identity = 378/663 (57.01%), Postives = 485/663 (73.15%), Query Frame = 0 Query: 97 EEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ----AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV--------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKA 747 E YF D+EE + DLPY PA SP Q + +SDS++DPL+AFMA +E D R + ++E K K A KG+R DI+E DD+E+Y++++ +NP AG +E+E+++EYD +GNPI S K IDPLPPI+H++I+Y FEKNFY+EH +I +L+ QV++L+ KL +++SGA PP+P +SFA FGFDE LM IRKSE+TQPTPIQ QG+P +SGRD+IGIAKTGSGKTAAF+WPML+HIMDQ L GDGPI +I+ PTREL QI++E K+FGK Y+L V YGGGS WEQ+K ++GAE+V+ TPGR+ID +K K TNL RV+YL+ DEADRMFDMGFE QVRSI HVRPDRQ LFSATF+++IE+LARD L DPI++VQG +GEA+EDVTQ+V++ G KWNWL LVEF S+G+VL+FVTKK N EELA+NL ++ +HGD+ Q ERN++I +FKKK PILVATDVAARGLDIP I+TV+N+DVARDIDTHTHR+GRTGRAG KG AYTL+T KD FAG LVRNLE ANQ V K+L++LAM++ WFR SRFK G+GK + ERPGLG S+++ + Y A K G++ RL+A+K AF++QY S F A Sbjct: 72 ENAYFEDEEED---NSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVE-DQAARDMKRLE----DKDKEKKNA----KGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI-APSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKPNIGGGGLGYRERPGLGSESSDRGNNNSVMSNY---EAYKPSSGAMGD---RLTAMKAAFQSQYKSHFVAA 715
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|122247124|sp|Q10MH8.1|RH24_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 24) HSP 1 Score: 523.472 bits (1347), Expect = 3.564e-174 Identity = 273/563 (48.49%), Postives = 365/563 (64.83%), Query Frame = 0 Query: 134 DSEE-DPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDE-ESYYKWLEDN--------PNAGRNADE---------DENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVK-GNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSR 676 D EE DPLDAFMA ++++++ ++ RAD D+ DD ES+ + +D+ +AG ++DE D +EYD + NPI + K I+P+PP++H+ I+Y+ F K+FY E ++ +S +V D + L +++SG P+P+ SFA GF LM I K + +PT IQ Q +P +LSGRD+IGIAKTGSGKTAAF+ PM+VHIMDQP L + +GPIG++ PTRELA QIY EAKKF K Y+L V YGG SK++Q K + G E+VIATPGR+ID+LKMK + R +YL+LDEADRMFD+GFEPQ+RSI +RPDRQ LFSAT ++ERLAR+ L DPI++ G VG A+ED+ QVV V+ K WLL L + G VL+F KK +E+ L+ + +HGD Q R E +QKFK + +LVATDVAARGLDI I+TVVNFD+A+++D H HR+GRTGRAG K G AYTL+T+K+ FAG LV L AA QDVP +LM+LAMK FR++R Sbjct: 64 DEEEIDPLDAFMAEIQEEIRAPPPAPKPEALR----------------RADSDDEDDPVESFLRAKKDSGLALAADAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDNPI-VVDKKKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKDGRFRANR 609
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|74896924|sp|Q54IV3.1|DDX42_DICDI (RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName: Full=DEAD box protein 42) HSP 1 Score: 521.161 bits (1341), Expect = 1.601e-170 Identity = 273/564 (48.40%), Postives = 365/564 (64.72%), Query Frame = 0 Query: 124 SPGATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATK--KAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEY------------DEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFR 673 S Q E+ D E DPLDAFM N+ +A++ +S K + Q +K R DID DDEE +YK + + + ++D++Y +E + I+PLPPI+H+ +Y F K FY EH DIA L+ QV ++++ L ++++G PVTSF H+GFD+ L++ I K PTPIQ Q IP LSGRD+I IAKTGSGKTA F+WP + HIMDQP L +GDGPI L L PTRELA QIY E K+ K + L YGG SK +Q K + G E+++ATPGR+IDM+K+K T L RVSYL+LDEAD+MFD GF PQV SI +HVRPDRQ LFSATFK +E AR L+DPIKI G +G A+ D+TQ+V+V+ KWNWL + L +S G+VLIFV+ K E+L+ NL + +HGD +Q ER++ IQ FK+ + IL+ATDVAARGLDIP I+ VVN+D +RDI++HTHR+GRTGRAG G AYTL+T KD F+ L++NLE+A+Q VP +L+++AM + F+ Sbjct: 138 SDSKNQNEDEDDEIDPLDAFMENV----------NAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYKLRQKQLANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHSKEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVPPELIDVAMNNPHFK 691
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|75318047|sp|O22907.2|RH24_ARATH (RecName: Full=DEAD-box ATP-dependent RNA helicase 24) HSP 1 Score: 506.523 bits (1303), Expect = 9.224e-168 Identity = 269/570 (47.19%), Postives = 357/570 (62.63%), Query Frame = 0 Query: 123 GSPGATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYK--------WLEDNPNAGRNADE---------DENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVK-GNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRS 674 G A E D E DPLDAFM + +++ K+ + + K R D+ D ESY K D NAG N+DE D ++YD + NPI + + I+P+ ++H+ I Y+ K+FY E I+ ++ + D +Q+LG+++SG +PV +F GF +M I+K + +PT IQ Q +P +LSGRDVIGIAKTGSGKTAAF+ PM+VHIMDQP L R +GPIG+I PTRELA QI+ EAKKF K Y L V YGG SK EQ K + G E+V+ATPGR+IDMLKMK + R SYL+LDEADRMFD+GFEPQVRSI +RPDRQ LFSAT ++E+LAR+ L+DPI++ G VG A+ED+TQVV V+ K WLL L + G VL+F +KK +E+ L + + +HGD Q R E +QKFK +L+ATDVAARGLDI ++TVVN+D+A+D+D H HR+GRTGRAG + G AYTLVT+++ FAG LV +L AA Q+VP +L +LAMK F+S Sbjct: 65 GGSAAASGGEVD-EIDPLDAFMEGIHQEM----------------KSAPPPKPKEKLERYKDDDDDPVESYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPI-VVDKRKIEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKDGRFKS 616
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|81890303|sp|Q62780.1|DDX46_RAT (RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName: Full=DEAD box protein 46; AltName: Full=Helicase of 117.4 kDa) HSP 1 Score: 414.846 bits (1065), Expect = 1.681e-129 Identity = 229/545 (42.02%), Postives = 323/545 (59.27%), Query Frame = 0 Query: 131 EESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTS------SKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKL-GVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKM---KVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665 E D E DPLDA+M ++++V+K + V+ + K+ + V D ++ + +E+ D++ +EY E ++L + +K L P++H I+Y+ F KNFY E ++A +S +V + ++ G+ + G PKP+ S+ G ++ +++K + +PTPIQ Q IPA++SGRD+IGIAKTGSGKT AFL PM HIMDQ L G+GPI +I+ PTRELALQI E KKF K L VVC YGG EQ ++GAE+++ TPGRMIDML +VTNL RV+Y++LDEADRMFDMGFEPQV I D+VRPDRQ +FSATF R +E LAR L+ PI++ G DV Q V V++ LL L + +G+V+IFV K+++ + L +L C +HG + Q +R+ II FK +LVAT VAARGLD+ H+ VVN+ + + HR GRTGRAG KG AYT +TE +AG +++ LE + VP DL +L Sbjct: 219 EMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMEN----------DQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF-LKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Match: gi|85540944|sp|Q569Z5.2|DDX46_MOUSE (RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName: Full=DEAD box protein 46) HSP 1 Score: 414.846 bits (1065), Expect = 1.772e-129 Identity = 229/545 (42.02%), Postives = 323/545 (59.27%), Query Frame = 0 Query: 131 EESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTS------SKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKL-GVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKM---KVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMEL 665 E D E DPLDA+M ++++V+K + V+ + K+ + V D ++ + +E+ D++ +EY E ++L + +K L P++H I+Y+ F KNFY E ++A +S +V + ++ G+ + G PKP+ S+ G ++ +++K + +PTPIQ Q IPA++SGRD+IGIAKTGSGKT AFL PM HIMDQ L G+GPI +I+ PTRELALQI E KKF K L VVC YGG EQ ++GAE+++ TPGRMIDML +VTNL RV+Y++LDEADRMFDMGFEPQV I D+VRPDRQ +FSATF R +E LAR L+ PI++ G DV Q V V++ LL L + +G+V+IFV K+++ + L +L C +HG + Q +R+ II FK +LVAT VAARGLD+ H+ VVN+ + + HR GRTGRAG KG AYT +TE +AG +++ LE + VP DL +L Sbjct: 219 EMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMEN----------DQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF-LKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1325281769|ref|XP_023325576.1| (ATP-dependent RNA helicase DDX42-like [Eurytemora affinis]) HSP 1 Score: 918.302 bits (2372), Expect = 0.000e+0 Identity = 479/790 (60.63%), Postives = 582/790 (73.67%), Query Frame = 0 Query: 13 GRGGLYGAFVTSSD--SNRPYRGAEIAPPTHLNSGR--------GG--GMVNEAPRDRQSFNNPTPGVSKHGYSSLTSIHASNMSFQE--APIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEI--------------------KGVRADIDEADDEESYYKWLEDNPNAGRNAD-EDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIK-EIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRF------KRGRGKGCLVERPGLG----MASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKAGPTESDIGP 756 G GGLYG FV++++ N+ YRGAEI PP +L+S GG G V AP VSK GYS+++SI +++S+ + I+K RTE+EYFN DEE E A YQP PGSPGA ++ D ++DPLDA+M +LEK+ + +G++ E V + K + +I KGVR DID+ D EESYY+WLE+NPNAG + D EDE I+YD +GNPI K +DPL I+H+ I+Y FEKNFY EH DIATLSNIQV+DLQQKL VK+SG PPKPVTSFAHFGFD+ LMK+IRKSEF+QP+ IQA IP LLSGRDVIGIA+TGSGKTAAFLWP+LVH+MDQP L +G+GPIGLIL PTRELALQI++EAKK+GKVY+++VVCAYGGG+K+EQ K FE GAE+ IATPGRMIDM+KMKVTN RV+YL+LDEADRMFDMGFEPQVRSIC+HVR DRQC LFSATFK+RIE LARD L DP+KIVQG++G ASE+VTQ VKV LGGYKW WL SLV+FMS G+VLIFVTKKQN EELAHNL +K EI+CRC+HGD+ Q ERNEII FKK+EFP+LVATDVAARGLDIPH+RTVVNFDVARDIDTHTHRVGRTGRAGVKG+AYTL+T DKEFAGH+VRNLE ANQ+VP+DLMELAM++ WF++SR+ G +RP LG ++++ + EQ+ Y + G G RL+AVK+A+KNQ+MS FR A +E+ P Sbjct: 5 GGGGLYGNFVSANEGVENKAYRGAEIPPPPNLDSSSRPRVIPKIGGVPGGVTSAPL----------VVSKQGYSTMSSISDASLSYSQYGVAIKKARTEDEYFNSDEEEEPAA------YQPKPGSPGAGN-QDLDDDDDPLDAYMKDLEKNAKDKGVSAAEKPVLGRKEEKKFPEKDIGGRRVLKTGMIAKKPMQDISKGVRQDIDDEDHEESYYRWLEENPNAGTSKDNEDEILIDYDADGNPIAPEKDKNVDPLAAIDHSLIKYHPFEKNFYEEHPDIATLSNIQVIDLQQKLNVKVSGPSPPKPVTSFAHFGFDDVLMKSIRKSEFSQPSSIQAMAIPTLLSGRDVIGIAETGSGKTAAFLWPLLVHVMDQPELRKGEGPIGLILAPTRELALQIFSEAKKYGKVYNISVVCAYGGGNKYEQGKSFEAGAEIAIATPGRMIDMIKMKVTNFERVTYLVLDEADRMFDMGFEPQVRSICNHVRQDRQCSLFSATFKKRIEILARDVLTDPVKIVQGNIGVASENVTQHVKVCPLGGYKWQWLTKSLVKFMSTGSVLIFVTKKQNSEELAHNLKVKAEIDCRCLHGDVFQSERNEIISAFKKQEFPVLVATDVAARGLDIPHVRTVVNFDVARDIDTHTHRVGRTGRAGVKGDAYTLITANDKEFAGHIVRNLEMANQEVPRDLMELAMQAQWFKNSRYKKGKGKGAGGTGLGFRDRPALGYEGDTSNSKDETPISEQFAYDRKRSE----GLARPGTDRLAAVKMAYKNQFMSNFRAAESSEAGYNP 773
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1067097003|ref|XP_018010479.1| (PREDICTED: ATP-dependent RNA helicase DDX42-like [Hyalella azteca] >gi|1067097005|ref|XP_018010480.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Hyalella azteca]) HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0 Identity = 442/786 (56.23%), Postives = 555/786 (70.61%), Query Frame = 0 Query: 42 LNSGRGGGMVN-EAPRDRQSFNNPTPGVSKHGYSSLTSIHASNM---SFQEAPIRKQ-RTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQAE-ESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGC------LVERPGLGMASAEKPSLTHEQYTYGDSSAP--KDLG--GSLATGA--------GRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGVQPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKSRWE 803 N GRG G + + R + P+ +SKHGY +LTSI + M ++ +RK+ +TE+EYF +++E +A+LPYQPAPGSPG + SDSEEDPLDAFM +E+ V++ + ++ + + E KGVR DIDE DDEESYY+++E+NPNAG++ D+ E ++EYD EGNPI SK IDPLPPI+H+ + Y F KNFY EH +IA L N QV DL++KLG+ ++G KPV+SF HFGFDE L+K++RKSE++QPTPIQAQ +P LSGRD+IGIAKTGSGKTAAFLWP+L+HIMDQP L GDGPIGLIL PTRELA QI+ EAKKFGKVY++NVVCAYGGGSKWEQSK E GAELV+ATPGR+ID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSICDHVRPDRQ LFSATFKR++ERLARD+L DPI+IVQG +GEA++D+ Q V V KW+WL LV M+AG+VLIFVT+K N EELA NL +KE EC +HGD+ Q ERN++I FKK P+LVATDVAARGLDIPHIRTVVN+DVARDIDTHTHR+GRTGRAG KG A+TL+TEKDKEFAGHLVRNLEAANQ+V K+L++LAM S WFR SRF+ G+ K ERPGLG S H + S+P K +G G +G RLSA++ AF+ QY S+F P+ P+ Q + + + + + + +++RKSRWE Sbjct: 3 FNRGRGFGFGSFKVKRPEIAPPPPSASLSKHGYHTLTSITNNAMHGGAYGYGQVRKRPKTEDEYFAEEDEGAKNDLDAELPYQPAPGSPGPAACKGNSDSEEDPLDAFMVGIEQQVKREDRRTAANADLAAKDSGSSSALESKGVRQDIDEEDDEESYYRYIEENPNAGKHGDDSEEEVEYDAEGNPIVTRKSKVIDPLPPIDHSTVNYPDFTKNFYQEHEEIAALDNAQVTDLRRKLGITVTGFAASKPVSSFGHFGFDEALLKSVRKSEYSQPTPIQAQAVPVALSGRDIIGIAKTGSGKTAAFLWPLLIHIMDQPELAPGDGPIGLILAPTRELAQQIHVEAKKFGKVYNINVVCAYGGGSKWEQSKALEAGAELVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICDHVRPDRQTLLFSATFKRKVERLARDALTDPIRIVQGELGEANQDIEQSVHVFSRADQKWSWLTRHLVSLMAAGSVLIFVTRKDNAEELAKNLKVKEFECLLLHGDMSQYERNDVITAFKKATTPVLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGRAFTLITEKDKEFAGHLVRNLEAANQEVTKELLDLAMTSQWFRKSRFRGGKAKQLGGRGLGFRERPGLG-------SQDHSGSSSSSYSSPAVKAMGPAGQAYSGVPDSSGPATNRLSALRAAFEAQYKSQFT----------PSSADPAWQSTAEGSHYAKMAEREKAKETEAE-----ANKKRRKSRWE 766
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1339074894|ref|XP_023724751.1| (ATP-dependent RNA helicase DDX42 [Cryptotermes secundus] >gi|1330877186|gb|PNF15835.1| ATP-dependent RNA helicase DDX42 [Cryptotermes secundus] >gi|1330877187|gb|PNF15836.1| ATP-dependent RNA helicase DDX42 [Cryptotermes secundus]) HSP 1 Score: 857.055 bits (2213), Expect = 0.000e+0 Identity = 432/701 (61.63%), Postives = 537/701 (76.60%), Query Frame = 0 Query: 56 RDRQSFNNPTP--GVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ--AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSL--THEQYTYGDSSAPKDLGGSLA----TGAG--RLSAVKVAFKNQYMSKF 744 RDR S P P +SKHGYS++++I + ++ RK R++ E DE+ E + L Y PAPGSP + SDSEEDPLDAFMA +E++VQ+ + A ++ + + KG+R DI+E D EESYY+++E+NP AG DE + +IEYDE+GNPI SK IDPLPPI+H++I Y FEKNFYN H +I+ L+ IQ+ +L+QKLG+K++G +PP PV+SFAHFGFDE LMK +RKSE+TQPTPIQAQ +PA L+GRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+LQIY EAK+FGKVY++ VVC YGGGSKWEQSK E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK+RIERLARD L DP++IVQG VGEA+ DVTQ+VK++ +GG KWNWLL+++V+FMS+G+VLIFVTKK N EELA+NL +KE + +HGD+ Q +RN++I +FKKKE ILVATDVAARGLD PHI+TVVNFDVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+V + L++LAM+S+WFR SRFK G+GK + G G+ E+P L + Q G P + + TG G RLSA+K AF++QYMS+F Sbjct: 23 RDRASQLPPPPSSAISKHGYSTMSAISQNALAASYGLPRK-RSKTEEEYFDEDDEHVTPTSTLEYIPAPGSPSYQPQGGQSSDSEEDPLDAFMAGIEREVQRE------------TDAIQEKEDKKKGIRDDIEEEDVEESYYRYMEENPLAGVQNDESDQEIEYDEDGNPIAPKKSKEIDPLPPIDHSEIDYIDFEKNFYNVHEEISNLTEIQIDELRQKLGIKVTGPLPPHPVSSFAHFGFDEALMKAVRKSEYTQPTPIQAQAVPAALNGRDIIGIAKTGSGKTAAFIWPMLVHIMDQKELQPGDGPIGLILAPTRELSLQIYNEAKRFGKVYNIQVVCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDILTDPVRIVQGDVGEANTDVTQIVKMLSVGGAKWNWLLNNIVQFMSSGSVLIFVTKKANAEELANNLKLKEFDVLLLHGDMDQTDRNKVITQFKKKEVDILVATDVAARGLDFPHIKTVVNFDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVSQSLLDLAMQSTWFRKSRFKSGKGKKVNIS--GRGLGYKERPGLGSSDSQTNSGSGMVPSSIADLIPKPVRTGPGTDRLSAMKAAFRSQYMSQF 708
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1153834624|ref|XP_020293962.1| (ATP-dependent RNA helicase DDX42 isoform X2 [Pseudomyrmex gracilis] >gi|1153834626|ref|XP_020293963.1| ATP-dependent RNA helicase DDX42 isoform X2 [Pseudomyrmex gracilis]) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 442/756 (58.47%), Postives = 543/756 (71.83%), Query Frame = 0 Query: 64 PTPGVSKHGYSSLTSIHASNMS-FQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPG------ATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQ-VVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSL------ATGAGRLSAVKVAFKNQYMSKFRKAG--PTESDIGPAGVQPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKSRWE 803 P +SK GY ++ +I + +S P ++ +TEEEY E + + L Y PAPGSP +T +ESDSEEDPLD FMA ++ +V++ N A + K K KG RADID DDEESYY+++E+NP AG +E + +IEYDE+GNPI K IDPLPPI+H++I+Y+ FEKNFYN H +IA+LS Q+ DL++ LG+K+SG PP PVTSF HFGFD+ L+K IRK+E+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY EA+KFGKVY++ V C YGGGSKWEQSK E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK+RIE+LARD L DPI+IVQG VGEA+ DVTQ V+ + KWNWLL +LVEF+SAG++LIFVTKK N EELA+NL +KE + +HGD+ Q ERN++I FKKK+ LVATDVAARGLDIPHI+TVVN+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAG+LVRNLE ANQ+VPK L++LAM+S+WFR SRFK G+GK V GLG S + S A KD+ + G+ RLSA+K AF++QY S+FR + E I P V +MPPP + PK+++ D E +R RKSRWE Sbjct: 36 PNSALSKQGYHTMNAITENALSACWGMPKKRSKTEEEY----FEDDDEPPTSSLEYIPAPGSPTNDLMKKSTTKDESDSEEDPLDVFMAGIDAEVKR---NNCAAQQEDNRKEDKS-----KGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKKDIDPLPPIDHSEIEYEPFEKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRQLSAGDGPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALENGAEIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRIEKLARDVLTDPIRIVQGDVGEANTDVTQHVIMFHNNPSGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERNKVITAFKKKDVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGYLVRNLEGANQEVPKSLIDLAMQSAWFRKSRFKGGKGKSINVGGAGLGFRGRPDSS----NASGSTSQASKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASSDHTWEQTITPPSV-------IMPPPSTVPSPKSTAQDNQAPNSSEPERKRVRKSRWE 768
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|557778946|ref|XP_005189100.1| (PREDICTED: ATP-dependent RNA helicase DDX42 [Musca domestica]) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 441/730 (60.41%), Postives = 537/730 (73.56%), Query Frame = 0 Query: 24 SSDSNRPYRGAEIAPPTHLNSGRGGGMVNEAPRDRQSFNNPTP---GVSKHGYSSLTSIHASNMSFQEAPIRKQR---TEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQA--EESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFR 745 SS SNR A + PP+ LN+ R Q F++ + G SKHGYS+L SI S + + I K+R TE++YF+DD+E Q PY PAPGSPG+ Q+ ++SDSEEDPLD FMA LEK V++ + K + A KGVR DIDE D+EESYY+++E+NP AG D + +IEYDE+GNPI K IDPLPPI H+ I Y+ FEKNFY H DI+ L+ QV DL++ LGVK++G PP PVTSFAHFGF+E LMK IRK+E+TQPTPIQAQ IPA L GRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+LQIY E KKFGKVY++NVVC YGGGSKWEQSK E+GAE+V+ATPGRMIDM+KMK TNL RV++L+LDEADRMF MGFEPQVRSIC+HVRPDRQ LFSATFK+RIERLARD L DP++IVQG + EA++D+TQ V V KWNWLL +LV F+S G+VLIFVTKK + E +A NL KE C +HGD+ Q ERN++I +FK+K+ ILVATDVAARGLDIPHI+ V+N+D+ARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE A+Q+VP+DLM+LAMKSSWFRSSRFK+G+GK GLG P+ + + +Y ++S K L S R +A++ AF+ QYMS+F+ Sbjct: 17 SSSSNRSAMNA-VPPPSSLNN-----------RGYQKFSSSSANKAGTSKHGYSTLESI--SQFTNSQNYIGKRRGCNTEDDYFDDDDE----QTTPSRPYIPAPGSPGSQQSNKQDSDSEEDPLDQFMAGLEKQVEREKVCKEGNQSGVPAVA--------KGVRGDIDEEDNEESYYRYMEENPQAGLRDDNSDVEIEYDEDGNPIAPPKKKDIDPLPPIYHSQIDYEPFEKNFYTPHEDISNLNEEQVRDLRKTLGVKVTGPEPPNPVTSFAHFGFEETLMKAIRKAEYTQPTPIQAQSIPAALGGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKTGDGPIGLILAPTRELSLQIYNETKKFGKVYNVNVVCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDITQYVFVFPNPLQKWNWLLLNLVRFLSEGSVLIFVTKKVDAETVASNLLTKEYNCLLLHGDMDQAERNKVITQFKRKDCDILVATDVAARGLDIPHIKNVINYDIARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGADQEVPQDLMDLAMKSSWFRSSRFKQGKGKKPAGNYAGLGYRERAAPTHSETRGSYANTS--KSL-SSAGPATDRYAAMREAFRAQYMSQFK 717
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1153834622|ref|XP_020293961.1| (ATP-dependent RNA helicase DDX42 isoform X1 [Pseudomyrmex gracilis]) HSP 1 Score: 848.195 bits (2190), Expect = 0.000e+0 Identity = 442/756 (58.47%), Postives = 543/756 (71.83%), Query Frame = 0 Query: 64 PTPGVSKHGYSSLTSIHASNMS-FQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPG------ATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQ-VVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSL------ATGAGRLSAVKVAFKNQYMSKFRKAG--PTESDIGPAGVQPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKSRWE 803 P +SK GY ++ +I + +S P ++ +TEEEY E + + L Y PAPGSP +T +ESDSEEDPLD FMA ++ +V++ N A + K K KG RADID DDEESYY+++E+NP AG +E + +IEYDE+GNPI K IDPLPPI+H++I+Y+ FEKNFYN H +IA+LS Q+ DL++ LG+K+SG PP PVTSF HFGFD+ L+K IRK+E+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY EA+KFGKVY++ V C YGGGSKWEQSK E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK+RIE+LARD L DPI+IVQG VGEA+ DVTQ V+ + KWNWLL +LVEF+SAG++LIFVTKK N EELA+NL +KE + +HGD+ Q ERN++I FKKK+ LVATDVAARGLDIPHI+TVVN+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAG+LVRNLE ANQ+VPK L++LAM+S+WFR SRFK G+GK V GLG S + S A KD+ + G+ RLSA+K AF++QY S+FR + E I P V +MPPP + PK+++ D E +R RKSRWE Sbjct: 68 PNSALSKQGYHTMNAITENALSACWGMPKKRSKTEEEY----FEDDDEPPTSSLEYIPAPGSPTNDLMKKSTTKDESDSEEDPLDVFMAGIDAEVKR---NNCAAQQEDNRKEDKS-----KGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKKDIDPLPPIDHSEIEYEPFEKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRQLSAGDGPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALENGAEIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRIEKLARDVLTDPIRIVQGDVGEANTDVTQHVIMFHNNPSGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERNKVITAFKKKDVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGYLVRNLEGANQEVPKSLIDLAMQSAWFRKSRFKGGKGKSINVGGAGLGFRGRPDSS----NASGSTSQASKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASSDHTWEQTITPPSV-------IMPPPSTVPSPKSTAQDNQAPNSSEPERKRVRKSRWE 800
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|345487283|ref|XP_001603249.2| (PREDICTED: ATP-dependent RNA helicase DDX42 [Nasonia vitripennis]) HSP 1 Score: 843.188 bits (2177), Expect = 0.000e+0 Identity = 438/769 (56.96%), Postives = 548/769 (71.26%), Query Frame = 0 Query: 64 PTPGVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ-------AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGY-KWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMAS-AEKPSLTHEQYTYGDSSAPKDLGGSLAT------GAGRLSAVKVAFKNQYMSKFRKAG--PTESDIGPAGV------------QPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKSRWE 803 P G SK GY ++ SI + +S P ++ +TEEEYF+DD++ + + L Y PAPGSP + E+SDSEEDPLDAFMA +E ++++ T + + + + KG+RADID DDEESYY+++E+NPNAG + D+ + +IEYDE+GNPI K IDPLPPI+H+ I Y+ FEKNFYN H DIA L+ Q+ +L++ LG+K++G PP PVTSF HFGFD+ L+K+IRK E+TQPTPIQAQ IP LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY EAKKFGKVY++ V C YGGGSKWEQSK E GAE+V+ATPGR+ID++KMK TNL+RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK+RIE+LARD+L DPI+IVQG VGEA+ DVTQ V V KW WL ++VE++S+G++LIFVTKK N EELA+NL +KE E +HGD+ Q ERN++I FKKK ILVATDVAARGLDIPHIRTV+N+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LA++S+WFR SRFK G+GK V G G S + + + + SS KD+ + G+ RLSA+K AF++QY ++FR + E I P V PS + PPP A++ ++D + +R RKSRWE Sbjct: 38 PNSGFSKQGYHTMNSITENALSTWGVPKKRSKTEEEYFDDDDDTPTS---STLEYIPAPGSPSYEEHINKNKKKEDSDSEEDPLDAFMAGIESEIER----------TKAPSVEDRKEEKTKGIRADIDGEDDEESYYRYMEENPNAGLHLDDSDQEIEYDEDGNPIAPLKKKEIDPLPPIDHSVIPYEPFEKNFYNVHEDIANLNKQQIDELRKTLGIKVTGPAPPNPVTSFGHFGFDDSLIKSIRKHEYTQPTPIQAQSIPVALSGRDLIGIAKTGSGKTAAFVWPMLVHIMDQKELDSGDGPIGLILAPTRELSQQIYHEAKKFGKVYNIRVCCCYGGGSKWEQSKALESGAEIVVATPGRIIDLVKMKATNLSRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRIEKLARDALTDPIRIVQGDVGEANTDVTQHVIVFYKNPTGKWTWLNQNIVEYLSSGSLLIFVTKKLNAEELANNLKLKEYEVLLLHGDMDQVERNKVITSFKKKTVSILVATDVAARGLDIPHIRTVINYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLALQSNWFRKSRFKSGKGKQVNVGGAGFGFRSKNSSSNQSDQSNSSASSSQSKDISDVVKKLERSGPGSDRLSAMKAAFRSQYNTQFRASSDHTWEQTITPPSVIMPPPPPPPPGGLPSAGMSMPPPPPPPGSEPANNKNVDAAEAAKQERKRVRKSRWE 793
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1241831502|gb|PBC27883.1| (ATP-dependent RNA helicase [Apis cerana cerana]) HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0 Identity = 442/771 (57.33%), Postives = 548/771 (71.08%), Query Frame = 0 Query: 67 GVSKHGYSSLTSIHASNMS-FQEAPIRKQRTEEE--------------YFNDDEEAEAAQAEADLPYQPAPGSPG------ATQAEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGY-KWNWLLSSLVEFMSAGTVLIFVTKK----QNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLAT------GAGRLSAVKVAFKNQYMSKFRKAGPTESDIGPAGVQPS-IQEQLMPPPFGINPPKASSPDLDGQPMPESGERRK-RKSRWE 803 +SK GY ++ SI + +S P ++ +TEEE YF DD++ E Y PAPGSP +T E+SDSEEDPLDAFMA ++ +V+K N EA + + +K+ KG RADID DDEESYY+++E+NP AG +E + +IEYDE+GNPI + K IDPLPPI+H++IQY++FEKNFYN H++IA L+ QV DL++ LG+K+SG PP PVTSF HFGFD+ L+K IRK+E+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY EA+KFGKVY++ V C YGGGSKWEQSK E GAE+V+ATPGR+ID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK+R+E+LARD L DP++IVQG VGEA+ DVTQ V V + KW WLL +L+EF+SAG++LIFVTKK N EELA+NL +KE + +HGD+ Q ERN++I FKKKE LVATDVAARGLDIPHIRTV+N+DVARDIDTHTHR+GRTGRAG KG AYTLVTEKDKEFAGHLVRNLE ANQ+VPK LM+LAM+S+WFR SRFK G+GK V GLG +P + S KD+ + G+ RLSA+K AF++QY S+FR + ++ +PS I P P N ++ + D GER++ RKSRWE Sbjct: 39 ALSKQGYHTMNSITENALSACWGMPKKRSKTEEESNAKTNAKLTGKIRYFEDDDDPPPYSLE----YIPAPGSPTYDWMKKSTPKEDSDSEEDPLDAFMAGIDAEVKK---NNYEAQLAEDERKEEKS----KGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKEGDGPIGLILAPTRELSQQIYQEARKFGKVYNVQVCCCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQNLIEFLSAGSLLIFVTKKVSNLLNAEELANNLKLKEFDVLLLHGDMDQIERNKVITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGFRG--RPEPSSTSSCSSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS--SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKTQDTQAS----GGERKRVRKSRWE 790
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|1228015157|ref|XP_021939549.1| (ATP-dependent RNA helicase DDX42 [Zootermopsis nevadensis]) HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0 Identity = 431/701 (61.48%), Postives = 532/701 (75.89%), Query Frame = 0 Query: 56 RDRQSFNNPTP--GVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ--AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLV------ERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAG--RLSAVKVAFKNQYMSKF 744 RDR S P P +SKHGYS++++I + ++ RK R++ E DE+ E + L Y PAPGSP + SDSEEDPLDAFMA +E++VQK + ++ + + KG+R DI+E D EESYY+++E+NP AG DE + +IEYDE+GNPI SK IDPLPPI+H+DI Y FEKNFYN H +I +L+ Q+ +L+QKLG+K++G +PP PV+SFAHFGFDE LMK +RKSE+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY+EAKKFGKVY++ VVC YGGGSKWEQSK E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK++IERL RD L DPI+IVQG +GEA+ DVTQ+VK++ GG KWNWLL+S+V+FM++G+VLIFVTKK N EELA+NL +KE + +HGD+ Q ERN++I +FKKKE +LVATDVAARGLD PHI+TVVNFDVARDIDTHTHR+GRTGRAG KG AYTLVT+KDKEFAGHLVRNLE ANQDVP+ L++LAM+S+WFR SRFK G ERPGLG + SL + +S + + + TG G RLSA+K AF++QYMS+F Sbjct: 73 RDRASQLPPPPSSAISKHGYSTMSAISQNALAASYGLPRK-RSKTEEEYFDEDDEHVTPASTLEYIPAPGSPSYQPQGGQSSDSEEDPLDAFMAGIEREVQKE------------TDKIEEKEDKKKGIRDDIEEEDVEESYYRYMEENPLAGVQNDESDQEIEYDEDGNPIAPKKSKEIDPLPPIDHSDIDYVEFEKNFYNVHEEITSLTLNQMDELRQKLGIKVTGPLPPHPVSSFAHFGFDEALMKAVRKSEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQKELQPGDGPIGLILAPTRELSQQIYSEAKKFGKVYNIQVVCCYGGGSKWEQSKALEDGAEIVVATPGRMIDLVKMKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKKIERLVRDVLIDPIRIVQGDIGEANTDVTQIVKLLSAGGAKWNWLLNSIVQFMTSGSVLIFVTKKANAEELANNLKLKEFDVLLLHGDMDQTERNKVITQFKKKEVNLLVATDVAARGLDFPHIKTVVNFDVARDIDTHTHRIGRTGRAGEKGTAYTLVTDKDKEFAGHLVRNLEGANQDVPQSLLDLAMQSAWFRKSRFKSGXXXXXXXXXXXXRERPGLGASD----SLANTGSGMVPNSITEMVPKPVRTGPGTDRLSAMKAAFRSQYMSQF 756
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Match: gi|646695667|gb|KDR08431.1| (hypothetical protein L798_01778 [Zootermopsis nevadensis]) HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0 Identity = 429/695 (61.73%), Postives = 531/695 (76.40%), Query Frame = 0 Query: 56 RDRQSFNNPTP--GVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEYFNDDEEAEAAQAEADLPYQPAPGSPGATQ--AEESDSEEDPLDAFMANLEKDVQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDNPNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKNFYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMKTIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIMDQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSKWEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMGFEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGEASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAHNLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRNLEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKPSLTHEQYTYGDSSAPKDLGGSLATGAG--RLSAVKVAFKNQYMSKF 744 RDR S P P +SKHGYS++++I + ++ RK R++ E DE+ E + L Y PAPGSP + SDSEEDPLDAFMA +E++VQK + ++ + + KG+R DI+E D EESYY+++E+NP AG DE + +IEYDE+GNPI SK IDPLPPI+H+DI Y FEKNFYN H +I +L+ Q+ +L+QKLG+K++G +PP PV+SFAHFGFDE LMK +RKSE+TQPTPIQAQ +PA LSGRD+IGIAKTGSGKTAAF+WPMLVHIMDQ L GDGPIGLIL PTREL+ QIY+EAKKFGKVY++ VVC YGGGSKWEQSK E GAE+V+ATPGRMID++KMK TNL RV++L+LDEADRMFDMGFEPQVRSIC+HVRPDRQ LFSATFK++IERL RD L DPI+IVQG +GEA+ DVTQ+VK++ GG KWNWLL+S+V+FM++G+VLIFVTKK N EELA+NL +KE + +HGD+ Q ERN++I +FKKKE +LVATDVAARGLD PHI+TVVNFDVARDIDTHTHR+GRTGRAG KG AYTLVT+KDKEFAGHLVRNLE ANQDVP+ L++LAM+S+WFR SRFK+ RPGLG + SL + +S + + + TG G RLSA+K AF++QYMS+F Sbjct: 23 RDRASQLPPPPSSAISKHGYSTMSAISQNALAASYGLPRK-RSKTEEEYFDEDDEHVTPASTLEYIPAPGSPSYQPQGGQSSDSEEDPLDAFMAGIEREVQKE------------TDKIEEKEDKKKGIRDDIEEEDVEESYYRYMEENPLAGVQNDESDQEIEYDEDGNPIAPKKSKEIDPLPPIDHSDIDYVEFEKNFYNVHEEITSLTLNQMDELRQKLGIKVTGPLPPHPVSSFAHFGFDEALMKAVRKSEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQKELQPGDGPIGLILAPTRELSQQIYSEAKKFGKVYNIQVVCCYGGGSKWEQSKALEDGAEIVVATPGRMIDLVKMKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKKIERLVRDVLIDPIRIVQGDIGEANTDVTQIVKLLSAGGAKWNWLLNSIVQFMTSGSVLIFVTKKANAEELANNLKLKEFDVLLLHGDMDQTERNKVITQFKKKEVNLLVATDVAARGLDFPHIKTVVNFDVARDIDTHTHRIGRTGRAGEKGTAYTLVTDKDKEFAGHLVRNLEGANQDVPQSLLDLAMQSAWFRKSRFKK---------RPGLGASD----SLANTGSGMVPNSITEMVPKPVRTGPGTDRLSAMKAAFRSQYMSQF 691 The following BLAST results are available for this feature:
BLAST of atp-dependent rna helicase ddx42-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of atp-dependent rna helicase ddx42-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of atp-dependent rna helicase ddx42-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold907_size82601:79249..81794- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold907_size82601-processed-gene-0.19 ID=snap_masked-scaffold907_size82601-processed-gene-0.19|Name=atp-dependent rna helicase ddx42-like|organism=Tigriopus kingsejongensis|type=gene|length=2546bp|location=Sequence derived from alignment at scaffold907_size82601:79249..81794- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-dependent rna helicase ddx42-like' has the following synonyms
Add to Basket
|