28s ribosomal protein mitochondrial, snap_masked-scaffold934_size79169-processed-gene-0.21 (gene) Tigriopus kingsejongensis

Overview
Name28s ribosomal protein mitochondrial
Unique Namesnap_masked-scaffold934_size79169-processed-gene-0.21
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000010971 (supercontig:LSalAtl2s:LSalAtl2s737:1060:1582:-1 gene:EMLSAG00000010971 transcript:EMLSAT00000010971 description:"maker-LSalAtl2s737-augustus-gene-0.13")

HSP 1 Score: 124.79 bits (312), Expect = 2.084e-37
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            +RL+ +I +E++AHQPAVLKSY+WF+ +AA EL + V   + E + H  RKTLLKS   HSKHR QYE+RTYY  +++  LT ST  T+L YVQR LPEGVSM V + EL   P  +
Sbjct:   22 DRLYKEIIMEIKAHQPAVLKSYSWFITKAASELSIHVSEVDTEPKPHIMRKTLLKSAANHSKHRAQYEIRTYYSKVRVAXLTGSTSXTFLXYVQRFLPEGVSMKVTKSELLNFPDKV 138
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62901059|sp|Q9VFB2.2|RT10_DROME (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 111.309 bits (277), Expect = 1.988e-30
Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLP 150
            ++L+ ++++ELR   PAVLKSY WF   AA+ L +         +AH  R TLLKS+ ++ KHRVQYE+RT++  +   KLT ST DT+LEY++RNLPEGV++     EL+ +P
Sbjct:   50 DKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIYKKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIP 163
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62900931|sp|Q5RFM3.1|RT10_PONAB (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 103.99 bits (258), Expect = 3.718e-27
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0 
Query:   39 LFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSE--GEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILE 155
            L+ ++ + ++ H  AVL SY +F   AA+EL +S+ + E   ++E    R TLL+S+ ++ KHRVQYEMRT Y  ++L+ LT ST D YLEY+QRNLPEGV+M V + +L  LP  I E
Sbjct:   72 LYKRLSVLVKGHDKAVLDSYGYFAVLAAKELGISIKVHEPPRKIE----RFTLLQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKE 186
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62900754|sp|Q7TQ82.1|RT10_RAT (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt; AltName: Full=Liver regeneration-related protein LRRG099)

HSP 1 Score: 101.679 bits (252), Expect = 7.699e-27
Identity = 56/127 (44.09%), Postives = 84/127 (66.14%), Query Frame = 0 
Query:   31 SSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSE--GEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILE 155
            ++S   + L+ ++ + ++AH  AVL SY +F   AA+EL +S+ + E   ++E    R TLLKS+ +  KHRVQYEMRT Y  ++L+ LT  T + YLEY+QRNLPEGV+M V + +++ LP  I E
Sbjct:   18 TTSDEPDTLYKRLSILVKAHDKAVLDSYEYFAVLAAKELGLSIKVHEPPRKIE----RFTLLKSVHIFKKHRVQYEMRTLYRCLELKHLTGCTANVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 140
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62901020|sp|Q80ZK0.1|RT10_MOUSE (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 101.679 bits (252), Expect = 9.286e-27
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0 
Query:   31 SSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEG--EVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILEDL 157
            ++S   + L+ ++ + ++AH  AVL SY +F   AA+EL +S+ + E   ++E    R TLLKS+ +  KHRVQYEMRT Y  ++L+ LT ST   YLEY+QRNLPEGV+M V + +++ LP  I E +
Sbjct:   23 TTSDEPDTLYKRLSILVKAHDRAVLDSYEYFAVLAAKELGISIKVHEPPRKIE----RFTLLKSVHIFKKHRVQYEMRTLYRCLELKHLTGSTASVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKEPM 147
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|108935894|sp|P82670.2|RT10_BOVIN (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 102.449 bits (254), Expect = 1.112e-26
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSE--GEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            + L+ ++ + ++ H  AVL SY +F   AA+EL +SV + E   ++E    R TLLKS+ +  KHRVQYEMRT Y  ++L+ LT ST D YLEY+QRNLPEGV+M V +  L  LP  I
Sbjct:   70 DTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKIE----RFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHI 184
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|20140017|sp|P82664.2|RT10_HUMAN (RecName: Full=28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt; AltName: Full=Mitochondrial small ribosomal subunit protein uS10m)

HSP 1 Score: 102.449 bits (254), Expect = 1.186e-26
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0 
Query:   39 LFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSE--GEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILE 155
            L+ ++ + ++ H  AVL SY +F   AA+EL +S+ + E   ++E    R TLL+S+ ++ KHRVQYEMRT Y  ++L+ LT ST D YLEY+QRNLPEGV+M V + +L  LP  I E
Sbjct:   72 LYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIE----RFTLLQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKE 186
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62900939|sp|Q5SPH9.1|RT10_DANRE (RecName: Full=Probable 28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 97.4413 bits (241), Expect = 7.108e-25
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 0 
Query:   13 SDPSPAVQPTPGGTQLASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            S PSPA+           + S   + L+ ++ ++++ H  AVL SY +F   AA+EL +S L    E   H  + TLLKS  +  KHRVQYEMRT+Y  IQ+ ++T S+   YLEY+QRNLPEGV+M V +  +  +P  I
Sbjct:   45 SPPSPAI-----------TESEEPDTLYQRLSVQVKGHDRAVLDSYEFFATLAAKELGLS-LEKVFEPPKHIDKLTLLKSRHIFKKHRVQYEMRTHYRCIQISRITGSSARVYLEYIQRNLPEGVAMEVTKTAMEKIPEHI 173
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62901065|sp|Q9XWV5.1|RT10_CAEEL (RecName: Full=Probable 28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 89.3521 bits (220), Expect = 4.312e-22
Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTL---LKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILED 156
            ++L+  +++E R H  AVLKSY  FL +  Q L++     +G +E     + +   L+S FVH K+++ YE RT+   +++  +T ST  T+LEY+QRN+PEGV M V   EL+PLP  I ++
Sbjct:   38 DKLYSSVEIEYRGHDKAVLKSYTSFLQQVCQHLEIP----QGRLEVLPYIRWVQPALRSKFVHKKYKLHYETRTHISKLEILNVTGSTASTFLEYIQRNIPEGVGMRVGFTELQPLPLTIQKN 156
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|62900954|sp|Q615B0.1|RT10_CAEBR (RecName: Full=Probable 28S ribosomal protein S10, mitochondrial; Short=MRP-S10; Short=S10mt)

HSP 1 Score: 87.0409 bits (214), Expect = 3.523e-21
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTL---LKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            ++L+  I++E R H  AVLKSY  FL +  + L++     +G +E     + +   L+S FVH K+++ YE RT+   +++  +T ST  T+LEY++RN+PEGV M V   EL+PLP  I
Sbjct:   41 DKLYSSIEIEYRGHDKAVLKSYTTFLQQVCKHLEIP----QGRLEVLPYIRWVQPALRSKFVHKKYKLHYETRTHITKLEILNVTGSTASTFLEYIERNIPEGVGMRVGFTELQPLPLTI 156
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1325332413|ref|XP_023348056.1| (28S ribosomal protein S10, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 146.747 bits (369), Expect = 5.330e-42
Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHEL 146
            ++LF  ID+ELRAH+PAVLKSY+WF+  +A ELD++V  S    E  K RKTLLKS  VH KHRVQYEMRTYY  I L+ LT ST DTYLEYVQRNLPEGVSM V   EL
Sbjct:   31 DKLFKCIDIELRAHEPAVLKSYSWFMNTSASELDITVEKSFAPEEPDKARKTLLKSAHVHKKHRVQYEMRTYYHFITLKHLTGSTADTYLEYVQRNLPEGVSMKVTTTEL 140
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|665813249|ref|XP_008555174.1| (PREDICTED: 28S ribosomal protein S10, mitochondrial [Microplitis demolitor])

HSP 1 Score: 130.954 bits (328), Expect = 1.777e-35
Identity = 64/136 (47.06%), Postives = 94/136 (69.12%), Query Frame = 0 
Query:   28 LASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILEDLAQRRAA 163
            LA++ + R ++LF +I++E+R ++PAVL+SY  F++ AA  L +++  +         R T+LKS FVH KHRVQYE RTYY  +   +LTEST DT+LEY+QRNLPEGV+M V + E++P+  ++ E L Q  AA
Sbjct:   35 LATNEAPRHDKLFKKIEVEVRGNEPAVLRSYGIFVSTAASHLGINMSKNSQPKRPIHERYTILKSAFVHKKHRVQYEYRTYYRYMNFDRLTESTADTFLEYIQRNLPEGVAMKVTKTEIQPVLESVREPLIQNTAA 170
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|225718894|gb|ACO15293.1| (Mitochondrial ribosomal protein S10 [Caligus clemensi])

HSP 1 Score: 128.257 bits (321), Expect = 1.243e-34
Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 0 
Query:   37 ERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            +RL+  I LE++AHQPAVLKSY+WF+ +AA EL + V   + E   H  RKT+LKS   HSKHR QYEMRTYY  +++ +LT ST DT LEYVQR LPEGVSM V   EL   P  +
Sbjct:   28 DRLYKGILLEIKAHQPAVLKSYSWFITKAASELSIHVAEVDPEPRPHIIRKTILKSAANHSKHRAQYEMRTYYSKVRVARLTGSTCDTSLEYVQRFLPEGVSMKVTRSELLQFPNKV 144
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|645018094|ref|XP_008205843.1| (PREDICTED: 28S ribosomal protein S10, mitochondrial [Nasonia vitripennis])

HSP 1 Score: 125.946 bits (315), Expect = 9.381e-34
Identity = 63/132 (47.73%), Postives = 91/132 (68.94%), Query Frame = 0 
Query:   22 TPGGTQLASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAI 153
            +P  + + S+ S++ ++L+ +I++E+R + PAVLKSY  F   AA  L ++V  +    +A   R TLLKS  VH KHRVQYE+RTYY  ++  KLT ST DT+LEY+QRNLPEGV+M V + E++ LP A+
Sbjct:   29 SPFSSSVPSTESAKPDKLYKKIEVEVRGNDPAVLKSYGIFTTTAANHLGITVNGNYAPYKAVHQRWTLLKSKHVHKKHRVQYEIRTYYRFLEFLKLTGSTADTFLEYIQRNLPEGVAMKVTKIEIQRLPEAV 160
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1009536455|ref|XP_015905019.1| (28S ribosomal protein S10, mitochondrial-like [Parasteatoda tepidariorum])

HSP 1 Score: 125.946 bits (315), Expect = 1.203e-33
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 0 
Query:   17 PAVQPTPGGTQLASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILEDLAQRRA 162
            P+         +++    + + L+  + +E+R H  AVL SY WF   +A EL + +     E   HK R+TLLKS+F++ KHRVQYEMRTY+ L + + LT ST DTYLEY+QRNLPEGVSM V +H +  LP  I   + +++ 
Sbjct:   17 PSFNKLAISANISNQVQPKLDDLYKSVLVEVRGHDQAVLNSYEWFAKTSANELGLKIA-KIWEPPVHKKRRTLLKSVFIYKKHRVQYEMRTYFRLFEFKHLTGSTADTYLEYIQRNLPEGVSMKVIKHRIEKLPDHIANHVTEKKT 161
[Close]
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1173892977|gb|OQR69976.1| (28S ribosomal protein S10 [Tropilaelaps mercedesae])

HSP 1 Score: 127.102 bits (318), Expect = 1.217e-33
Identity = 63/149 (42.28%), Postives = 97/149 (65.10%), Query Frame = 0 
Query:   19 VQPTPGGTQLA--------SSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILEDLAQ 159
            V PT   T+          SS++   ++L+  +DLE+R H PAV++SY  F+ E+A+ LD+ ++ +    + H  R+   KS+F H KH VQYE RTYY +I L+ +TEST +T+LEY++RN+PEGV+M V +HE++PLP  + E  +Q
Sbjct:   54 VMPTMSATKTCVEKPVISSSSATDEFDKLYRNLDLEVRGHDPAVIRSYKCFILESAKHLDIPLVKTYEPTKIHD-RRNKKKSVFGHGKHFVQYEARTYYQVIILENVTESTANTFLEYIERNIPEGVTMKVTKHEIQPLPEHLRERPSQ 201
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|929375230|ref|XP_014097716.1| (PREDICTED: 28S ribosomal protein S10, mitochondrial [Bactrocera oleae])

HSP 1 Score: 126.331 bits (316), Expect = 1.273e-33
Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 0 
Query:   33 SSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLP 150
            +  +++LF ++++ELR   PAVLKSYAWF   AA  L++ V  S  E +AH  R TLLKS+ ++ KHRVQYE+RTY+  I   K+T ST DT+LEY++RNLPEGV++   + EL+ +P
Sbjct:   51 AGEKDQLFSKLEIELRGVDPAVLKSYAWFATTAASHLNIEVGKSWAERKAHHDRLTLLKSVHIYKKHRVQYEVRTYFRYINFHKMTGSTLDTFLEYIERNLPEGVALNATKTELQEIP 168
[Close]
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|675381994|gb|KFM74896.1| (28S ribosomal protein S10, mitochondrial, partial [Stegodyphus mimosarum])

HSP 1 Score: 125.561 bits (314), Expect = 1.727e-33
Identity = 63/130 (48.46%), Postives = 88/130 (67.69%), Query Frame = 0 
Query:   32 SSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILEDLAQRR 161
            +S   + L+ ++ +E+R H  AVL SY WF   AA EL+V++     E + H  R+TLLKS+F++ KHRVQYE RTY+ + +L+ LT ST DTYLEY+QRNLPEGVSM V +H L  LP  I   + +++
Sbjct:   36 ASQELDELYRKVIVEVRGHDQAVLNSYEWFAKIAASELNVNID-KIWEPKQHHARRTLLKSVFIYKKHRVQYEFRTYFRIFELKHLTGSTADTYLEYIQRNLPEGVSMKVTKHRLEKLPEHIANYVPEKK 164
[Close]
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|751471907|ref|XP_011191244.1| (PREDICTED: 28S ribosomal protein S10, mitochondrial [Zeugodacus cucurbitae])

HSP 1 Score: 125.561 bits (314), Expect = 1.740e-33
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 0 
Query:    7 SSPEIPSDPSPAVQPTPGGTQLASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLP 150
            S+    S P      T  G    +  ++ +++LF ++++ELR   PAVLKSYAWF   AA  L++ V  S  E +AH  R TLLKS+ ++ KHRVQYE+RTY+  +   K+T ST DT+LEY++RNLPEGV++   + E++ +P
Sbjct:   26 STATTTSSPEAVQNITTSGI---NEVTAEKDKLFSKLEIELRGVDPAVLKSYAWFANTAANHLNIEVGKSWAERKAHHDRLTLLKSVHIYKKHRVQYEVRTYFRYMNFHKMTGSTLDTFLEYIERNLPEGVALNATKTEIQEIP 166
[Close]
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|751780409|ref|XP_011199327.1| (PREDICTED: 28S ribosomal protein S10, mitochondrial [Bactrocera dorsalis])

HSP 1 Score: 125.561 bits (314), Expect = 1.944e-33
Identity = 66/150 (44.00%), Postives = 96/150 (64.00%), Query Frame = 0 
Query:    8 SPEIPSDPSPAVQ--PTPGGTQLASSSSSRRERLFLQIDLELRAHQPAVLKSYAWFLAEAAQELDVSVLLSEGEVEAHKTRKTLLKSIFVHSKHRVQYEMRTYYWLIQLQKLTESTRDTYLEYVQRNLPEGVSMVVREHELRPLPRAILE 155
            S EI    +  +Q   TP   ++A      +++LF ++++ELR   PAVLKSYAWF   AA  L++ V  S  E +AH  R TLLKS+ ++ KHRVQYE+RTY+  +   K+T ST DT+LEY++RNLPEGV++   + EL+ +P  + E
Sbjct:   28 STEIAGSSAEPIQNITTPAINEVAV----EKDKLFSKLEIELRGVDPAVLKSYAWFATTAANHLNIEVGKSWAERKAHHDRLTLLKSVHIYKKHRVQYEVRTYFRYMNFHKITGSTLDTFLEYIERNLPEGVALNATKTELQEIPEHLRE 173
The following BLAST results are available for this feature:
BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000109712.084e-3753.85supercontig:LSalAtl2s:LSalAtl2s737:1060:1582:-1 ge... [more]
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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
gi|62901059|sp|Q9VFB2.2|RT10_DROME1.988e-3046.49RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|62900931|sp|Q5RFM3.1|RT10_PONAB3.718e-2747.06RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|62900754|sp|Q7TQ82.1|RT10_RAT7.699e-2744.09RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|62901020|sp|Q80ZK0.1|RT10_MOUSE9.286e-2744.19RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|108935894|sp|P82670.2|RT10_BOVIN1.112e-2647.90RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|20140017|sp|P82664.2|RT10_HUMAN1.186e-2647.06RecName: Full=28S ribosomal protein S10, mitochond... [more]
gi|62900939|sp|Q5SPH9.1|RT10_DANRE7.108e-2541.13RecName: Full=Probable 28S ribosomal protein S10, ... [more]
gi|62901065|sp|Q9XWV5.1|RT10_CAEEL4.312e-2239.02RecName: Full=Probable 28S ribosomal protein S10, ... [more]
gi|62900954|sp|Q615B0.1|RT10_CAEBR3.523e-2139.17RecName: Full=Probable 28S ribosomal protein S10, ... [more]
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BLAST of 28s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325332413|ref|XP_023348056.1|5.330e-4266.3628S ribosomal protein S10, mitochondrial-like [Eur... [more]
gi|665813249|ref|XP_008555174.1|1.777e-3547.06PREDICTED: 28S ribosomal protein S10, mitochondria... [more]
gi|225718894|gb|ACO15293.1|1.243e-3456.41Mitochondrial ribosomal protein S10 [Caligus cleme... [more]
gi|645018094|ref|XP_008205843.1|9.381e-3447.73PREDICTED: 28S ribosomal protein S10, mitochondria... [more]
gi|1009536455|ref|XP_015905019.1|1.203e-3342.4728S ribosomal protein S10, mitochondrial-like [Par... [more]
gi|1173892977|gb|OQR69976.1|1.217e-3342.2828S ribosomal protein S10 [Tropilaelaps mercedesae... [more]
gi|929375230|ref|XP_014097716.1|1.273e-3350.00PREDICTED: 28S ribosomal protein S10, mitochondria... [more]
gi|675381994|gb|KFM74896.1|1.727e-3348.4628S ribosomal protein S10, mitochondrial, partial ... [more]
gi|751471907|ref|XP_011191244.1|1.740e-3343.06PREDICTED: 28S ribosomal protein S10, mitochondria... [more]
gi|751780409|ref|XP_011199327.1|1.944e-3344.00PREDICTED: 28S ribosomal protein S10, mitochondria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold934_size79169supercontigscaffold934_size79169:76083..76580 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold934_size79169-processed-gene-0.21-mRNA-1snap_masked-scaffold934_size79169-processed-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold934_size79169:76083..76580-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold934_size79169-processed-gene-0.21 ID=snap_masked-scaffold934_size79169-processed-gene-0.21|Name=28s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=498bp|location=Sequence derived from alignment at scaffold934_size79169:76083..76580- (Tigriopus kingsejongensis)
ATGAGGCAGTCGGAGCCGTCCAGCCCCGAGATCCCCTCGGACCCGTCACC
GGCGGTTCAGCCCACGCCCGGAGGCACTCAGTTGGCCAGCTCGAGCTCGT
CGCGCCGCGAGCGACTCTTCCTGCAAATCGACCTGGAGCTGCGCGCGCAT
CAGCCGGCCGTGCTCAAGAGCTACGCCTGGTTCCTGGCCGAGGCGGCCCA
GGAGCTGGACGTGAGCGTGCTCCTCTCGGAGGGCGAAGTGGAGGCGCACA
AGACGCGCAAGACGCTGCTCAAGTCCATATTCGTCCACTCCAAGCATCGC
GTGCAGTACGAGATGCGCACCTACTACTGGCTGATCCAACTCCAGAAACT
GACCGAGAGCACCCGCGACACCTATCTCGAGTACGTGCAGCGCAATCTCC
CCGAGGGCGTGTCCATGGTCGTGCGGGAGCACGAGCTCCGCCCCTTGCCC
CGCGCCATCCTCGAGGACTTGGCCCAACGGCGGGCGGCCCAAACTTAG
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Synonyms
The feature '28s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk02409
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