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Associated RNAi Experiments
Homology
BLAST of kinetoplast dna-associated protein vs. L. salmonis genes
Match: EMLSAG00000010803 (supercontig:LSalAtl2s:LSalAtl2s715:242575:348584:-1 gene:EMLSAG00000010803 transcript:EMLSAT00000010803 description:"maker-LSalAtl2s715-augustus-gene-3.14") HSP 1 Score: 161.384 bits (407), Expect = 9.228e-40 Identity = 81/154 (52.60%), Postives = 110/154 (71.43%), Query Frame = 0
Query: 32 RRSSPQWKGHFDRLSGIWGSRSSASSSVAGSLPTSPLPYHLWSDLEKQKQRGGYPWTHLHHNQEEEVWIDPLKLPRDISAVTIRRRDKSIPKEWFHLPEGAEPPTVEELLRESSSDEE-PSSPDLGRAKSPPICGRG--RSKSRERKLHKHDRK 182
R +S QWK H+ ++ +WGS++ S+ + S+ LW ++ KQKQ+G YP+THL H QEEEVWIDPL LP+DI+ T+RR K IP+EWFHLP+G EPP+V +LL+ESSSDEE SS +L ++ ICGRG RSKS+E+KL+K +K
Sbjct: 40 RGTSSQWKNHYANVAKLWGSQNMTSTIPSESMSKG----ELWQEVRKQKQQGVYPYTHLSHKQEEEVWIDPLSLPQDITTATLRR--KEIPREWFHLPQGVEPPSVTDLLKESSSDEEGVSSSELHHSR---ICGRGRSRSKSKEKKLNKTLKK 184
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold963_size76285 | supercontig | scaffold963_size76285:58686..64562 + |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold963_size76285:58686..64562+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold963_size76285-processed-gene-0.5 ID=snap_masked-scaffold963_size76285-processed-gene-0.5|Name=kinetoplast dna-associated protein|organism=Tigriopus kingsejongensis|type=gene|length=5877bp|location=Sequence derived from alignment at scaffold963_size76285:58686..64562+ (Tigriopus kingsejongensis)
ATGACGGAATCGGGAAAATCACCCACGCCAATCACGGGTAAGGTCATTGA
GATCAGCCTTCCATGTGGAGGCCACCCTCGTGTCCAAGATGGATGCCAAT
CCCCAATGCTGTCCCTGATGAACAATATGTTCGGAGTGTGATGAATCCGC
CAGCTATTTCGGGGACTAAAAAAAAACCTAAGGTGTTTTTGTACACAAAT
GCTGGCCTGTGGGCACTCAAATGTACCGCTGATGACAATCCAAGCCTCGC
AATGTCCACACATTGTGAGCTCCTGTAGGGGGGAAAACGAGCCTGACTTT
CCAGGCACATTATTGGCTTAGCATTGGAGTCATGGACATTGATCCTTGTT
TACCCCTCCGAATGATGCTCACAACTAGGGTGTGTTCCAAGCTACACCAA
ATGTGCCCAACCACTAATTCAATGGTCGTAGGCTCGCCGGTGAGGCTTTT
TACCAATTGCTCCGGTCCTATTGTCCGTATTCAAAAATTGGTATGCCTCA
ACCAGTTACTTGAATGGGGAAGTGGTCAGCGATGAGGCCTGCGGTGGTGA
AGGACCGCAGATCGAATTCCGGGCCCGGCGGATAAAGAAATTTTCGCCAC
TCCAGACTTTCTTCTACTGAGGGGAGCTGACGTCTCCCTGTAACCCTAGT
TCCTTGGGTCAGGAAAACAGGTGCGGCCACATCTTGAGGAAGGGTCCCTT
CTGGTTTCCCCACAAATTAAAGTAGTGGTTGGAACTGGATTGTACGGGGC
TGCACGGCGACTAGCTTAATTAGCTAATAACATCAGTGGGCCCTGTGTAC
ACCATGGGTGCTCCATGGTGCGAACACGAAACCACCAGAAGGTGCGATAA
CACACACTCTGTGTACGAGCTGTATGATGTGTCCACATCCTAACCGGCCC
TGTCGAATATTGAGCCTGCCAACTGGGCCATTCTTTGCGTACTTGATCAT
ACGAGATTCTCTCTCATGTGAGCAGTTCGAACGTCATGAATGCATAACGA
CTGAGTGGCAGTCCTCTTCTTTAAGTTCGCGAGGCCCCGACACTCACGGA
TCCTTTTGAGAGTCTGCCATCGAGCTCTCGACGAAGGTCCTCGCCCCAGT
GGAAAGGGCATTTCGATCGACTCTCAGGCATTTGGGGCAGTCGCAGCTCA
GCCTCAAGTTCTGTGGCAGGTCAGCAAAGGCGATTGATTGCTCCCACGAT
TGTTAGCGACCACAACCAAAATATTGTCTGCAGTAGACCACACATTACTA
CACCCCCACTCACTAAAGTATGAATGACTTTCTTGTCCGATTGATACTTA
CCACTTTTTGCACGATGTATCGGTCCGCAACGACAGAAAAAGGACTTATT
CTCGTACAATGGTCCAGTCTATAAATGTCCCGCATTAATTAAACCCATGC
TTTCGTTTTCGGGCGTCCACAACGTTTACTGAAGGGACACGAGATTTAAG
ACACTCTGGTGGTGCAATGGCGCAACATGGCTTGAATTGTTCTGCACCAC
TTAATCGGCCCATTGGACCACCGACCCAAGAGAGCGTAGAAAACTGAACA
TAAATCAGACTTTTGACGGACATTTCCCTTCTATTCAGGTTCTCTGCCCA
CCTCACCGTTGCCCTACCATCTTTGGTCTGACCTGGAGAAGCAAAAACAA
CGGGGTGGCTATCCATGGACCCATTTGCACCACAATCAAGAGGAAGAAGT
TTGGATTGATCCTCTCAAACTTCCTAGAGACATCTCTGCGTAAGTTGGCT
TCCTATTTGTTCTGGCCATCACTGTAGCAACTTACATTTTTTCCAGGGTA
ACCATTCGACGACGCGACAAAAGCATCCCTAAAGAATGGTTCCATTTGCC
CGAAGGCGCCGAGCCTCCCACGGTGGAGGAACTCTTGCGCGAGTCCTCGT
CGGACGAGGAACCATCCAGTCCAGACTTAGGGCGAGCCAAGTCTCCTCCC
ATCTGTGGGCGTGGGCGGAGTAAATCTCGGGAACGAAAGCTGCATAAGCA
CGACCGAAAACCAGTGACACCCGGAGTTCAGGTTCAGCCGGAAAGATCCG
TTGACCCCCAACCACATGAGTATGAAACTTTCTCATACTCAAACTCCTCC
GATCACGACCCCCCGTTGCCCTTGGCCGGCTTGGCAGCGCCCCTCAGAGT
GGCTTCCTCACCCGATCCGGTAGCAGGCAAGCCGATTTCAGTGCTGCCCG
ATGATCAGGAAGATACATCCACCGGATGTTTCAGTCGGGGATCGCGCTCC
AGAAGCAAGTCCAAGGACCGCAAAGCTGCCAAGCGATCCGAGAGCCGCCA
ACGGGAACTCGAGCACGATGAAAACGACGCATATTCTCTGCCTCCCAGGC
AGACTGGGGGGCCAGGCCGATTGGCGCCTGGGGTTGATCGGAATACAAAG
CCCAGTCTCAAGGCCATCAAAAAGCGTTCCAAGCCAGACAAATTGGATAA
AGTCCCGCCAGAAGAGACGTCTTATGAGGTAGTGGGACAACCCCGCTCGG
CTGGATATGAAGTAGTCGGAACCCCCGTGAGCTTTGCTCGTGGACGCCTG
GCCTCCGATGGGCGCTCGAACGTCAACAACCCATTCCTTGTGACTGAGGA
GGGAAATGGCATTGTGCCCGACCGAACAGATTATGAGGATGTTGCATCCC
CCCATCCGGAGCAGACACGGCCAGAGGAGGGGCAGTGGTCGCCTAAGGGT
ATACGTCCCAATGAGCGCTTAGACAGGATCATGGTCGAAGAAGAGTTCAA
ATTGCACACACCCATGATGAAACCCAAAATGGTACTGGAATCAGAGCAGG
ATCTCAGTCTTGCACAAGCCAAGCCTGGCGGAGGTAATGAATTCGCAAAG
GGCGAAGGGATGGGAGACACGAAAGACAAGGATGCCAAAGAGGAAAAAAA
ACGAAGAGAAAAAGAGGAAAAGGATGCCAAAGAGGAAATAAAGCGGAAAG
AGAAGGAAGAAAAAGAGGCCAAAGACGAATCGAAACGAAGAGAAAAGGAG
GAAAAAAGAGCCATGGCGCAGAGGGAAAAAGAAGCCAAAGAGGGGAAAAT
CAAACTTGAAAATGAAGCCAAAGAGGAAAAGGTTAGGAAAGACAGGGCAG
CGAAAGAGGAGAAACTCAGAAATTACAAAGATGCCAAGGAGGAGAAGCTT
AGAAGAGAAAAAGAGGCCAAAGAGGAAAAGCTAAGACTCGAAAAGGAAGC
CAAAGAGCTGAAGATGCGCCAAGAAAAAGAGGAAAAAGAGGCGAAAATGA
AAAAGGAAAAGGAGGCCAAAGAAGAAAGATCCAGGGTCGACGCAGAAGCC
CAAGAGCAGAAGCGACAAGAGAGAGAAGCCACTGAAGATAAAATGAAGAA
GGAAAAGGACGCCAGAGAAGAGATGTTAAGACTTAAAGTGGCAGCCAGAG
CAGAGAGGGTGAAAATGGAAGACGAGGCCAAACCGGAGAAGCTCCGGCTT
GAAAACGAAGAAGACTTCAGAAAGAAAGAAGACGCAATGGCTGGCCAGGT
CTGCCTGGACGACAAGCATGAGAACAAGAATGACGAGCAAGATCGAATGA
ACGAGGAAAAAATGTTTAGAGCCCATACTGATGTCGAGGAGACCCAATCG
AGAGAAGGAGATCCATTCCACAAGGCAATGAGGATGGAACAAGAACAAGG
CAACGAGGCCAAGCGAGTCCAAATTGAGGAACAAAATCTTCAAGAACACC
CGAAGAAGGATAGAGACGCTCTCAGAAGTTTGAACGCAGACCAGTGCCAC
ATTTTGGAGAACGAGTCTAAACTGGGCTTAAAACCCGACGACGATCCTTC
TCAGAACCCTTTCGATACTCCAATCCAAGCCGAAATCAACCCATTTGAAC
ACGCTGCAGGCGACGATTTTGGCGTCAGCAACGATGACTGGGAAAAGATC
GAGGCCGAAATGGCATTGGACGACCACAAGGAAGGCAACAATGGACTAAT
ATTCACTGCTTTCGAGCCGGACGATGCTGAACCGCAAGAACACGATCGAC
TTGGGCGTCAAGCGCAGGACGAAATTGCCAAACTCTTCAATTCAAATAGT
CTGGAACGGACTACAGCCCCCTCAAAGAGTCCCGCCCCAACAGATGAGAC
CGATGATTATGAGGACGTGGGCGAATCGAGGCACGTGGGCGAATCGAGGC
CAGAGGAGAAGAAAGAAGAGGACAAGGCGCGAATGGCTGATAGGCAACAA
ATGCTCAAGGAGCAGTACTTGAGAGAACAACAGGAACTGAAGACCAAAAA
GGACAATCGGAAGAAGGGAAAACAGCGTGACAAATCACAGGACAGCAAAC
TCTCCTTTTCCTTTTTCAGCACCACTTCTTCTCATAAAGATCCTGAAGAC
GAATTAGCCTTACTGACCCCTTCATCCCGGTCCTTAAGCAACTTGGGTGA
CGACCAAAGCCTGTCCAAGAAAGAGCGGGCCAAGATTGCGAAAGAAGCCA
AAGCCGAGAAGAAGAAACTGGTTCGCGCAGAAAAAGACCGCCTAAAAGCT
GAAATTGCGGCCAACAAGCAACAGCTGAAGGATGACAAAAAGCAGCAGGA
ACTGGAAGCCAAGCAGCGTGACCTGGCAAGCAAGGTGAAAAAAGACCGAG
ACAAACGGGAAAAAGCGGAAAAGCAAGCCGAACTAGCCAGGCTAGCAAAG
GAGCAGAAGGAGGAGGAAAAGAGGAAAAAAGTGGAGGAACAGGAGGTAAA
ACAACTTAGTGCGGCGAAAAAAGAGGAGGAAGAGAAGGCCAAAAAGGATA
AGGAATCGGTGGCATTGGCCAAGATCCAGAAGGAGGAGGAAAATAGGAAA
AAGCAAGAGGAAGTGGAAGCGAAGCAACGTGATATGTCAAGCAAGGAGAA
GGAAGAGGAAGCCAAAAGGGAAACGGCCGAAAAGCAAGCCGAACTAGCCA
GACAGGCCAAGGAGCAGCAGGAAGAAGCTAAGAGAGAAAAACAGGAGGAA
GTGAAGGCAAAACAAGATAACTTGGCAAACATGGAGGAGGAAGCAAAGGC
CAAAAAGGATAAGGAATCGGCAGCAATGGCGACAAAGCAGAAGGAAGAAG
ACAGCAGGAAAAAAGAGAAGGAATTTGAAGCAAAGGAACGTAACATGTCA
AACAAGGAGAAGAAAGAGCAATACAAACGAGAAAAGGCAGAAAAGCAAGC
CGAACTCGCCAGACTAGCCAAGGAACAGAAAGAGGAAGATAAAAGGAAAA
AGCAAGAGGACAAAAAGAGGGCTCTAGACGAAAAGAAGATAAAAGCCGAG
AAGCAATTGGAAATGGCTCAATTGGCCAAGGACCAGAAAGAAGTGGAAAA
AATGAAGAAACTGTCAAAGAAAGAACAAGAGGAACAAGGCAAGGAGAACA
TGACCGCTAAACCAGCCGAGTTGGCCGTTTTGGCCAAGACACAAAAGGAA
GAACAAAAGAAAAAAGCACATCACCCGCCAGGCAACCAGCAGGAAGATAT
CATACAAGCAAATCAACTTCAGGTTATCCCTAAGAAGAAGTCAGTGGGAA
AGGATACTCTGGACATATCAGATCCAGATCAGGAGGAGGAAGTGGTGGGG
GAGATTTCTCTTTCGGTCAGAGACGACTTAGCGCCAGAAGCTTTCAATCC
TCGCAAATCTGAAATGCCAGCTGAAGCTCTCCCTTCTTTTGGGACAAAAC
CACCCAAAGAGACTGAGGGCATAATTAATGACACCGAACATCCAAGCACA
CTTCATATCGAGGCAAGTAAGAGCAAAGAACACATATCGGGGTCCTCGAA
AGCCGTTAATAAGCGCTCCTTCCTGAGCAAACTCTTCCACTCCAAAGGCA
AAAAGGCTAAATCCATGTCCGATTTGAATACACCTCTTGATAGCTGCGAG
GACTTGGACGAGAATCAAGAGAGGTGA back to top
Synonyms
The feature 'kinetoplast dna-associated protein' has the following synonyms
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