succinyl- synthetase subunit beta, snap_masked-scaffold9680_size2355-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Namesuccinyl- synthetase subunit beta
Unique Namesnap_masked-scaffold9680_size2355-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of succinyl- synthetase subunit beta vs. L. salmonis genes
Match: EMLSAG00000010316 (supercontig:LSalAtl2s:LSalAtl2s683:123173:125150:-1 gene:EMLSAG00000010316 transcript:EMLSAT00000010316 description:"maker-LSalAtl2s683-snap-gene-1.55")

HSP 1 Score: 339.732 bits (870), Expect = 1.335e-114
Identity = 180/357 (50.42%), Postives = 239/357 (66.95%), Query Frame = 0 
Query:    7 VVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVG----FVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVK 359
            VVKAQ+ AGGRGKG+FK    G  GGV+L  S EE    AK M+G  L+T QTG  G+  N V + +      E Y+A   +R+ +        + S++GG++IE+VA++ P+ I  F +D   G      ++IA EL +    +++  ++   LY  F+ +D  M+EINPL     G    LDAK+ FD NA +RQ +V + RD T+E+  E+EA+ Y+LNYIALDG+IGCMVNGAGLAMATMDIIKL+G  PANFLDVGGGAT  +V EAFKIIT DP+V  I+VNIFGGIMRCDVIAEG++AA KE+ L  P+VVRL+GTNV+E K +I +SGL ++  DNL + A+  VK  K
Sbjct:   84 VVKAQVLAGGRGKGRFKN---GTKGGVQLVYSPEEVEIAAKGMIGDHLITKQTGQEGRICNSVMVTERKYARKEYYVAFTNERKFANKCMXPVLIGSSQGGVNIEDVASSDPDAIKTFPIDINNGLSLERAKQIALELDIPKSKLEEVGNIFINLYNLFISKDATMVEINPLAEDSSGKFVCLDAKLRFDDNAEFRQKDVFDQRDWTQENQSEVEAANYNLNYIALDGDIGCMVNGAGLAMATMDIIKLHGGSPANFLDVGGGATALQVKEAFKIITGDPKVHAIMVNIFGGIMRCDVIAEGIIAAAKELKLSTPIVVRLQGTNVDEAKVMIASSGLKILPLDNLDEAARIAVKLSK 437
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BLAST of succinyl- synthetase subunit beta vs. L. salmonis genes
Match: EMLSAG00000000230 (supercontig:LSalAtl2s:LSalAtl2s1031:49472:50789:-1 gene:EMLSAG00000000230 transcript:EMLSAT00000000230 description:"maker-LSalAtl2s1031-augustus-gene-0.59")

HSP 1 Score: 333.183 bits (853), Expect = 1.491e-112
Identity = 176/353 (49.86%), Postives = 232/353 (65.72%), Query Frame = 0 
Query:    6 WVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAV 358
            +V+KAQI AGGRGKG F     G  GGV L K   + A     MLG +L+T QT PAG  V++V + +   I+ E Y  +L+DRE +    V S +GG+DIE+VA  TPE+I    +  +TG      + +A  LG EG+  +QC   +  LY  F++ D   LE+NPL  T  G +   DAK+ FD NA +RQ  + ++ DTTE D +E+EA+ ++LNY+ +DG IGC+VNGAGLA ATMDIIKLYG +PANFLDVGG   +E+V EAF+IIT D +VK ILVN+FGGI+ C  IA GVV A K + L +PLVVRLEGTNVE  K I+  SGL + +A +L D A+K VKA+
Sbjct:   67 YVIKAQILAGGRGKGIFDN---GFKGGVHLTKDKRQVASLCSNMLGHSLITKQTPPAGIPVSKVMVAEAIDIKRETYFCILLDREYNGPVIVASPDGGVDIEDVAERTPERIKKIPISISTGCTHEIAQDVAAFLGFEGELKEQCAGQIKNLYDMFIKVDCVQLEVNPLAETTDGMIYTADAKLGFDDNAEFRQKNIFKMEDTTEMDPREVEAAAHNLNYVQMDGNIGCLVNGAGLAXATMDIIKLYGGDPANFLDVGGSVQEEQVKEAFRIITEDSKVKAILVNVFGGIVNCATIANGVVNACKSINLNLPLVVRLEGTNVEAAKKILEESGLPIQSAADLDDAAKKAVKAL 416
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Match: gi|189030213|sp|A6UDP2.1|SUCC_SINMW (RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta)

HSP 1 Score: 516.153 bits (1328), Expect = 0.000e+0
Identity = 258/360 (71.67%), Postives = 297/360 (82.50%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            L GPL+VVK+QIHAGGRGKGKFKE GA   GGVRLAKS +E    A++MLG TLVT QTGP+GKQVNR+YIEDG+ I+ ELYL++LVDR   +V FV STEGGMDIE VA +TPEKI+  ++DP  G      + +   L L+G+A      L  ILYKAF+E+DM +LE+NPLIV   G ++VLDAKVSFDGNA++R  +V  LRDTTEED KE+EASKYDL Y+ALDG IGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGA+KEKVT+AFKIIT+DP VKGILVNIFGGIM+CDVIAEGV+AAVKEVGLKVPLVVRLEGTNVE GK IIN SGL+VI+AD+L D AQKIV AVKG
Sbjct:   38 LPGPLYVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Match: gi|226734966|sp|B6JE33.1|SUCC_OLICO (RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta)

HSP 1 Score: 516.153 bits (1328), Expect = 0.000e+0
Identity = 263/360 (73.06%), Postives = 304/360 (84.44%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            L GP+WVVK+QIHAGGRGKGKFKEA AG+ GGVRLAKS++E  +   +MLG+TLVT QTGPAGKQVNR+Y+E+G+ I+ E YL+ LVDRETSR+ FV STEGGMDIE+VA +TPEKI+ FSVDPATG  P HGR++A  L L+G   KQ   L+  LY AF+ +DM MLEINPLI++  G+L+ LDAK+SFD NA+YR  +V ELRD TEED+KE+EASKYDL YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVGGGA++EKVT AFKIIT+DP VKGILVNIFGGIM+CDVIA GVVAAVK VGLKVPLVVRLEGTNVEEGK II  SGL+V+ AD+L D AQKIVKAVKG
Sbjct:   38 LGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFVDQMLGKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLKGDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIYRHPDVMELRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Match: gi|54039643|sp|P66868.1|SUCC_BRUSU (RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|54042231|sp|P66867.1|SUCC_BRUME RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|75496187|sp|Q57AX2.1|SUCC_BRUAB RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|189046890|sp|A9M8R2.1|SUCC_BRUC2 RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|189046891|sp|A5VSQ3.1|SUCC_BRUO2 RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|189046892|sp|B0CIT0.1|SUCC_BRUSI RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|226734927|sp|B2S880.1|SUCC_BRUA1 RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta >gi|254778433|sp|C0RFH1.1|SUCC_BRUMB RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta)

HSP 1 Score: 513.457 bits (1321), Expect = 0.000e+0
Identity = 261/360 (72.50%), Postives = 294/360 (81.67%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            L GPL+VVK+QIHAGGRGKGKFKE  A   GGVRLAKSVEE    AK+MLG TLVT QTG AGKQVNR+YIEDG+ IE ELYL++L+DR   R  FV STEGGMDIE VA  TPEKI+  ++DPA G       ++A  L LEG A +  + L  ILYKAF E+DM +LEINPLIV   G ++VLDAKVSFD NA++R  ++ ELRD TEED KE+EASKYDL Y+ALDG IGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGA+KEKVT AFKIIT+DP V+GILVNIFGGIM+CDVIAEGV+AAVKEVGLKVPLVVRLEGTNVE GK IIN SGL+VI+AD+L D AQKIV AVKG
Sbjct:   38 LPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Match: gi|254778424|sp|B9JCF4.1|SUCC_AGRRK (RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta)

HSP 1 Score: 513.072 bits (1320), Expect = 0.000e+0
Identity = 257/360 (71.39%), Postives = 294/360 (81.67%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            L GPL+VVK+QIHAGGRGKGKFKE      GGVRLAKS+E+    +K MLG TLVT QTGPAGKQVNR+YIEDG+ I+ ELYL++LVDR   +V FV STEGGMDIE VA +TPEKII  ++DPA G        I+  L LEG A +    L  ILYKAF+E+DM +LE+NPLIV   G L+VLDAKVSFDGNA++R  ++  LRD +EED KE++A +YDL Y+ALDG IGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT AFKIIT+DP V+GILVNIFGGIM+CDVIAEGV+AAVKEVGLKVPLVVRLEGTNVE GK IIN SGL+VI+AD+L D AQKIVKAVKG
Sbjct:   38 LPGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEDVVANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLEGAAREDGAKLFPILYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKVSFDGNALFRHEDIRALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Match: gi|122315054|sp|Q0AKU3.1|SUCC_MARMM (RecName: Full=Succinate--CoA ligase [ADP-forming] subunit beta; AltName: Full=Succinyl-CoA synthetase subunit beta; Short=SCS-beta)

HSP 1 Score: 511.146 bits (1315), Expect = 0.000e+0
Identity = 264/359 (73.54%), Postives = 297/359 (82.73%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVK 359
            L GPLWVVK+QIHAGGRGKGKFKE G+   GGVRLA S E+  + AK+MLG TLVTHQTGP GK+VNR+YIEDG+ I TELY +LLV+RET +V FV STEGGMDIEEVAA TPEKI    +DP+TG        +   L LEG+A +  + L  ILY AF E+DM MLEINPLIV D G ++VLDAKVSFDGNA++R  ++ ELRDTTEED KE+EASKYDL Y+ALDG+IGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGAT EKVT AFKIIT+DP VKGILVNIFGGIMRCDVIAEGVV AVK+VGL+VPLVVRLEGTNV +GK IIN SGL+VIAAD+L D AQKIV AVK
Sbjct:   38 LPGPLWVVKSQIHAGGRGKGKFKELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKRVNRLYIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLEGQAREDMMGLAKILYTAFCEKDMSMLEINPLIVMDNGHVRVLDAKVSFDGNALFRHPDIMELRDTTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQIINESGLNVIAADDLDDAAQKIVAAVK 396
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BLAST of succinyl- synthetase subunit beta vs. nr
Match: gi|338758585|gb|AEI95049.1| (succinyl-CoA ligase (ADP-forming) subunit beta [Roseobacter litoralis Och 149])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 328/360 (91.11%), Postives = 344/360 (95.56%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            LDGPLWVVKAQIHAGGRGKG FKE  AGE GGVRL KSV EAAEEAKKMLGRTLVTHQTGPAGKQVNR+YIEDG+GIETELYLALLVDR+TSRV FVCSTEGGMDIEEVAA+TPEKI++FSVDPA+GYQ FHGRRIAF LGLEGK VKQCV LMG+LY AF+E+DMEMLEINPLIVTD GDLKVLDAKV+FDGNAMYR A+++ELRD TEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNV++GK IINNSGLDVIAADNLKDGAQKIVKAVKG
Sbjct:   38 LDGPLWVVKAQIHAGGRGKGSFKEVDAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGAGIETELYLALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFSLGLEGKQVKQCVGLMGLLYNAFMEKDMEMLEINPLIVTDSGDLKVLDAKVAFDGNAMYRHADISELRDVTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVQQGKDIINNSGLDVIAADNLKDGAQKIVKAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. nr
Match: gi|1110747527|ref|WP_071972683.1| (ADP-forming succinate--CoA ligase subunit beta [Sulfitobacter sp. AM1-D1] >gi|1108552719|gb|APE44341.1| succinate--CoA ligase subunit beta [Sulfitobacter sp. AM1-D1])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 328/360 (91.11%), Postives = 349/360 (96.94%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            +DGPLWVVKAQIHAGGRGKGKFKEA AG+AGGVRLAKSVEEAAE+AKKMLGRTLVTHQTGPAGKQVNR+YIEDGS IETELYLALLVDR+T RV FVCSTEGGMDIEEVAANTP+KI++FSVDPATGYQPFHGRRIAF LGLEGK VKQCV+LMG+LYKAFLE+DMEMLEINPLIVTDGGDLKVLDAK+SFDGNA+YR A++AELRDTTEED KELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATK+KVTEAFKIITSDP VKGILVNIFGGIMRCDVIAEGV+AAVKEVGLKVPLVVRLEGTNVE+GK IINNS +DVIAA++LKDGAQKIVKAVKG
Sbjct:   38 MDGPLWVVKAQIHAGGRGKGKFKEADAGDAGGVRLAKSVEEAAEQAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIETELYLALLVDRQTQRVSFVCSTEGGMDIEEVAANTPDKILSFSVDPATGYQPFHGRRIAFALGLEGKQVKQCVNLMGLLYKAFLEKDMEMLEINPLIVTDGGDLKVLDAKLSFDGNAIYRHADIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKDKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIINNSDVDVIAAEDLKDGAQKIVKAVKG 397
[Close]
BLAST of succinyl- synthetase subunit beta vs. nr
Match: gi|499887128|ref|WP_011567862.1| (ADP-forming succinate--CoA ligase subunit beta [Roseobacter denitrificans] >gi|109455037|gb|ABG31242.1| succinyl-CoA synthase, beta subunit [Roseobacter denitrificans OCh 114] >gi|1097805162|emb|SFF98436.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Roseobacter denitrificans OCh 114] >gi|1356713512|gb|AVL54290.1| ADP-forming succinate--CoA ligase subunit beta [Roseobacter denitrificans])

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 328/360 (91.11%), Postives = 346/360 (96.11%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            LDGPLWVVKAQIHAGGRGKG FKEA AGE GGVRL KSV EAAEEAKKMLGRTLVTHQTGPAGKQVNR+YIEDGSGIETELYLALLVDR+TSRV FVCSTEGGMDIEEVAA+TPEKI++FSVDPA+GYQ FHGRRIAF LGLEGK VKQCV LMG+LY AF+E+DMEMLEINPLIVT+ GDLKVLDAKV+FDGNA+YR A+++ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNV++GK IINNSGLDVIAAD+LKDGAQKIVKAVKG
Sbjct:   38 LDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFALGLEGKQVKQCVGLMGLLYTAFMEKDMEMLEINPLIVTNTGDLKVLDAKVAFDGNAIYRHADISELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. nr
Match: gi|849130950|ref|WP_047994546.1| (ADP-forming succinate--CoA ligase subunit beta [Puniceibacterium sp. IMCC21224] >gi|846954853|gb|KMK66346.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Puniceibacterium sp. IMCC21224])

HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0
Identity = 328/360 (91.11%), Postives = 345/360 (95.83%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            LDGPLWVVKAQIHAGGRGKG FKEA AGE GGVRL KSVEEAA+EAKKMLGRTLVTHQTGPAGKQVNR+YIEDGSGIETELYLALLVDR+TSRV FVCSTEGGMDIEEVAA+TPEKI++FSVDPATGYQ FHGRRIAF LGL GKA+KQCV LM +LYKAF+E+DMEMLEINPLIVTD GDLKVLDAKVSFDGNA+YR A++AELRDTTEED+KELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGV+AAVKEVGLKVPLVVRLEGTNVE+GK II  SGLDVIAAD+LKDGAQKIVKAVKG
Sbjct:   38 LDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAQEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQSFHGRRIAFSLGLSGKAMKQCVGLMELLYKAFIEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAIYRHADIAELRDTTEEDAKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIIRTSGLDVIAADDLKDGAQKIVKAVKG 397
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BLAST of succinyl- synthetase subunit beta vs. nr
Match: gi|1180911165|ref|WP_084351610.1| (ADP-forming succinate--CoA ligase subunit beta [Pseudooceanicola flagellatus] >gi|1175026977|emb|SMC62990.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pseudooceanicola flagellatus])

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 326/360 (90.56%), Postives = 344/360 (95.56%), Query Frame = 0 
Query:    1 LDGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGSGIETELYLALLVDRETSRVGFVCSTEGGMDIEEVAANTPEKIINFSVDPATGYQPFHGRRIAFELGLEGKAVKQCVSLMGILYKAFLERDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRQAEVAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADNLKDGAQKIVKAVKG 360
            +DGPLWVVKAQIHAGGRGKG FKEA AGE GGVRL KSVEEAA+EAK+MLGRTLVTHQTGPAGKQVNR+YIEDGSGIETELYLALLVDR+TSRV FVCSTEGGMDIEEVAA+TPEKI++FSVDPA GYQ FHGRRIAF LGL GK VKQCV LMG+LYKAF+E+DMEMLEINPLIVTD GDLKVLDAKVSFDGNA+YR A++AELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGL+VPLVVRLEGTNVE+GK IIN SGL+VIAADNL DGA+KIVKAVKG
Sbjct:   38 MDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAADEAKRMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPAAGYQAFHGRRIAFALGLSGKQVKQCVGLMGLLYKAFIEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAVYRHADIAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397
The following BLAST results are available for this feature:
BLAST of succinyl- synthetase subunit beta vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000103161.335e-11450.42supercontig:LSalAtl2s:LSalAtl2s683:123173:125150:-... [more]
EMLSAG000000002301.491e-11249.86supercontig:LSalAtl2s:LSalAtl2s1031:49472:50789:-1... [more]
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BLAST of succinyl- synthetase subunit beta vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|189030213|sp|A6UDP2.1|SUCC_SINMW0.000e+071.67RecName: Full=Succinate--CoA ligase [ADP-forming] ... [more]
gi|226734966|sp|B6JE33.1|SUCC_OLICO0.000e+073.06RecName: Full=Succinate--CoA ligase [ADP-forming] ... [more]
gi|54039643|sp|P66868.1|SUCC_BRUSU0.000e+072.50RecName: Full=Succinate--CoA ligase [ADP-forming] ... [more]
gi|254778424|sp|B9JCF4.1|SUCC_AGRRK0.000e+071.39RecName: Full=Succinate--CoA ligase [ADP-forming] ... [more]
gi|122315054|sp|Q0AKU3.1|SUCC_MARMM0.000e+073.54RecName: Full=Succinate--CoA ligase [ADP-forming] ... [more]

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BLAST of succinyl- synthetase subunit beta vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|338758585|gb|AEI95049.1|0.000e+091.11succinyl-CoA ligase (ADP-forming) subunit beta [Ro... [more]
gi|1110747527|ref|WP_071972683.1|0.000e+091.11ADP-forming succinate--CoA ligase subunit beta [Su... [more]
gi|499887128|ref|WP_011567862.1|0.000e+091.11ADP-forming succinate--CoA ligase subunit beta [Ro... [more]
gi|849130950|ref|WP_047994546.1|0.000e+091.11ADP-forming succinate--CoA ligase subunit beta [Pu... [more]
gi|1180911165|ref|WP_084351610.1|0.000e+090.56ADP-forming succinate--CoA ligase subunit beta [Ps... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9680_size2355supercontigscaffold9680_size2355:1175..2324 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold9680_size2355-processed-gene-0.1-mRNA-1snap_masked-scaffold9680_size2355-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold9680_size2355:1175..2324-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold9680_size2355-processed-gene-0.1 ID=snap_masked-scaffold9680_size2355-processed-gene-0.1|Name=succinyl- synthetase subunit beta|organism=Tigriopus kingsejongensis|type=gene|length=1150bp|location=Sequence derived from alignment at scaffold9680_size2355:1175..2324- (Tigriopus kingsejongensis)
CTACGGCGCACCAGTTTCCGACGGGCGCATTGTGCTCAAAGCAGAAGACG
CCAAAAACGCGGCAGCCGAACTGGATGGCCCACTGTGGGTCGTAAAAGCG
CAAATCCACGCAGGTGGCCGCGGCAAAGGTAAATTCAAGGAAGCCGGCGC
TGGCGAAGCAGGCGGTGTGCGTCTGGCCAAGTCTGTGGAAGAAGCAGCCG
AAGAAGCCAAAAAGATGTTGGGCCGCACGCTGGTCACACACCAGACAGGT
CCGGCCGGCAAGCAAGTGAACCGCGTCTACATCGAAGACGGCTCTGGCAT
CGAGACAGAACTCTACCTCGCTCTTCTGGTTGACCGCGAAACATCCCGCG
TGGGCTTTGTCTGCTCCACCGAGGGTGGCATGGACATCGAAGAAGTCGCC
GCAAACACACCCGAGAAGATCATCAACTTCTCCGTTGATCCGGCAACAGG
CTATCAGCCGTTCCACGGCCGTCGCATCGCGTTTGAACTGGGCCTGGAAG
GCAAAGCGGTAAAGCAGTGCGTAAGCCTGATGGGCATCCTCTACAAAGCG
TTCCTCGAGCGTGACATGGAGATGCTGGAAATCAACCCGCTGATCGTGAC
CGACGGCGGTGATCTGAAAGTCCTCGACGCGAAAGTGTCCTTTGATGGCA
ACGCGATGTACCGTCAGGCCGAAGTGGCCGAACTGCGCGACACCACCGAA
GAAGACAGCAAAGAGCTGGAAGCCTCCAAGTACGACCTCAACTACATCGC
GCTGGACGGCGAGATTGGCTGCATGGTGAACGGTGCGGGTCTGGCGATGG
CGACGATGGACATCATCAAGCTTTATGGCGCCGAGCCTGCAAACTTCCTC
GACGTTGGTGGCGGTGCGACCAAAGAGAAAGTGACAGAAGCGTTCAAGAT
CATCACCTCCGACCCACAGGTCAAAGGCATCCTCGTGAACATCTTCGGCG
GCATCATGCGCTGCGATGTGATCGCCGAGGGCGTTGTTGCTGCGGTTAAG
GAAGTCGGCCTGAAAGTGCCGCTGGTTGTCCGCCTTGAGGGGACAAACGT
TGAAGAAGGCAAAGCCATCATCAACAACTCCGGCCTTGATGTGATTGCCG
CTGACAACCTGAAAGACGGCGCGCAGAAGATCGTGAAAGCGGTTAAGGGC
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Synonyms
The feature 'succinyl- synthetase subunit beta' has the following synonyms
Synonym
Tk03829
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