60s ribosomal protein l31, snap_masked-scaffold96_size378025-processed-gene-2.10 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l31
Unique Namesnap_masked-scaffold96_size378025-processed-gene-2.10
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 60s ribosomal protein l31 vs. SwissProt
Match: gi|134034935|sp|P0C2H8.1|RL31A_YEAST (RecName: Full=60S ribosomal protein L31-A; AltName: Full=L34; AltName: Full=Large ribosomal subunit protein eL31-A; AltName: Full=YL28)

HSP 1 Score: 91.2781 bits (225), Expect = 3.414e-24
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   12 MGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            + +VVTREYTINLHKRLHG+ FK RAPRA+KE+KKFA+  MGT DVR+   LN+ IW +GV
Sbjct:    4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGV 64          
BLAST of 60s ribosomal protein l31 vs. SwissProt
Match: gi|134034936|sp|P0C2H9.1|RL31B_YEAST (RecName: Full=60S ribosomal protein L31-B; AltName: Full=L34; AltName: Full=Large ribosomal subunit protein eL31-B; AltName: Full=YL28)

HSP 1 Score: 91.2781 bits (225), Expect = 3.977e-24
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   12 MGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            + +VVTREYTINLHKRLHG+ FK RAPRA+KE+KKFA+  MGT DVR+   LN+ IW +GV
Sbjct:    4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGV 64          
BLAST of 60s ribosomal protein l31 vs. SwissProt
Match: gi|51701762|sp|Q6FWF4.1|RL31_CANGA (RecName: Full=60S ribosomal protein L31 [[Candida] glabrata CBS 138])

HSP 1 Score: 89.3521 bits (220), Expect = 1.871e-23
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   12 MGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            + +VVTREYTIN+HKRLHG+ FK RAP+A+KE+KKFA+  MGT DVR+   LN+ IW +GV
Sbjct:    4 LKDVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGV 64          
BLAST of 60s ribosomal protein l31 vs. SwissProt
Match: gi|15214262|sp|Q9URX6.1|RL31_SCHPO (RecName: Full=60S ribosomal protein L31)

HSP 1 Score: 86.6557 bits (213), Expect = 2.105e-22
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    8 KGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            K S + +VVTR+YTI++HKRL+G+ FK RAPRAIKE+  FA+K M T +VRVD  LNK +W +G+
Sbjct:    5 KKSAINQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGI 69          
BLAST of 60s ribosomal protein l31 vs. SwissProt
Match: gi|1173024|sp|P45841.1|RL31_CHLRE (RecName: Full=60S ribosomal protein L31)

HSP 1 Score: 85.5001 bits (210), Expect = 8.344e-22
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    7 KKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            K  S   E VTREYTI+L KRLH   FK  AP+A+KE++KFA K MGT+DVR+D +LNK +WS+G+
Sbjct:    3 KDKSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGI 68          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|225711882|gb|ACO11787.1| (60S ribosomal protein L31 [Lepeophtheirus salmonis] >gi|290462667|gb|ADD24381.1| 60S ribosomal protein L31 [Lepeophtheirus salmonis])

HSP 1 Score: 144.436 bits (363), Expect = 1.807e-42
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            M PK EKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAE+QMGT DVRVDTRLNKHIWSQGV
Sbjct:    1 MGPKKEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEQQMGTADVRVDTRLNKHIWSQGV 72          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|961377084|gb|ALS05286.1| (60S ribosomal protein L31 [Pseudodiaptomus poplesia])

HSP 1 Score: 134.42 bits (337), Expect = 1.329e-38
Identity = 62/72 (86.11%), Postives = 69/72 (95.83%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            MAP+ EKKG+T+GEVVTREYTINLHKRLHGIGFKYRAPRA+KE+KKFAEKQMGT DVR+DTRLNK IW+QGV
Sbjct:    1 MAPRKEKKGATIGEVVTREYTINLHKRLHGIGFKYRAPRAVKEIKKFAEKQMGTPDVRIDTRLNKAIWAQGV 72          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|1325277527|ref|XP_023323401.1| (60S ribosomal protein L31-like [Eurytemora affinis])

HSP 1 Score: 133.265 bits (334), Expect = 4.722e-38
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            MAP+ EKK S +GEVVTREYTINLHKRLHGIGFKYRAPRA+KE+KKFAEKQMGT DVR+DTRLNK IW+QGV
Sbjct:   10 MAPRKEKKSSAIGEVVTREYTINLHKRLHGIGFKYRAPRAVKEIKKFAEKQMGTVDVRIDTRLNKAIWAQGV 81          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|961374986|gb|ALS04237.1| (60S ribosomal protein L31 [Acartia pacifica] >gi|961374988|gb|ALS04238.1| 60S ribosomal protein L31 [Acartia pacifica] >gi|961374990|gb|ALS04239.1| 60S ribosomal protein L31 [Acartia pacifica] >gi|961374994|gb|ALS04241.1| 60S ribosomal protein L31 [Acartia pacifica] >gi|961374996|gb|ALS04242.1| 60S ribosomal protein L31 [Acartia pacifica])

HSP 1 Score: 128.642 bits (322), Expect = 3.273e-36
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            M+P+ + K S + EVVTREYTINLHKRLHGIGFKYRAPRA+KE+KKFAEKQMGT DVR+DTRLNK IW+QGV
Sbjct:    1 MSPRNQNKNSAINEVVTREYTINLHKRLHGIGFKYRAPRAVKEIKKFAEKQMGTKDVRIDTRLNKAIWAQGV 72          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|961374992|gb|ALS04240.1| (60S ribosomal protein L31 [Acartia pacifica])

HSP 1 Score: 128.257 bits (321), Expect = 3.572e-36
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            M+P+ + K S + EVVTREYTINLHKRLHGIGFKYRAPRA+KE+KKFAEKQMGT DVR+DTRLNK IW+QGV
Sbjct:    1 MSPRNQNKNSAINEVVTREYTINLHKRLHGIGFKYRAPRAVKEIKKFAEKQMGTKDVRIDTRLNKAIWAQGV 72          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|1344808364|ref|XP_023946969.1| (60S ribosomal protein L31 [Bicyclus anynana] >gi|1344808366|ref|XP_023946970.1| 60S ribosomal protein L31 [Bicyclus anynana])

HSP 1 Score: 123.25 bits (308), Expect = 4.025e-34
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    3 PKGEKKG-STMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            PKGE+KG S + EVVTREYTINLHKRLHG+GFK RAPRAIKEV+KFAEKQMGT DVRVDTRLNK++WS+GV
Sbjct:    4 PKGERKGKSAINEVVTREYTINLHKRLHGVGFKRRAPRAIKEVRKFAEKQMGTPDVRVDTRLNKYLWSKGV 74          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|700589126|gb|AIU94824.1| (60S ribosomal protein [Phragmatopoma lapidosa])

HSP 1 Score: 122.479 bits (306), Expect = 7.581e-34
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    1 MAPKGEKKGSTMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            MAP+ +KK S   EVVTREYT+N+HKR+HGIGFK RAPRAIKE++KFAEK MGT DVR+DTRLNKH+WSQGV
Sbjct:    1 MAPQAKKKKSVTNEVVTREYTVNVHKRIHGIGFKKRAPRAIKEIRKFAEKMMGTPDVRIDTRLNKHMWSQGV 72          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|914570145|gb|KOB73604.1| (Ribosomal protein L31 [Operophtera brumata])

HSP 1 Score: 122.479 bits (306), Expect = 9.346e-34
Identity = 56/71 (78.87%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    3 PKGEKKG-STMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            PKGE+KG S + EVVTREYT+NLHKRLHG+GFK RAPRAIKE++KFAEKQMGT DVRVDTRLNK++WS+G+
Sbjct:    4 PKGERKGKSAINEVVTREYTVNLHKRLHGVGFKRRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKYLWSKGI 74          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|268306418|gb|ACY95330.1| (ribosomal protein L31 [Manduca sexta])

HSP 1 Score: 122.094 bits (305), Expect = 1.043e-33
Identity = 57/71 (80.28%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    3 PKGEKKG-STMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            PKGE+KG S + EVVTREYT+NLHKRLHG+GFK RAPRAIKE++KFAEKQMGT DVRVDTRLNK++WS+GV
Sbjct:    4 PKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKYLWSKGV 74          
BLAST of 60s ribosomal protein l31 vs. nr
Match: gi|913309900|ref|XP_013185559.1| (PREDICTED: 60S ribosomal protein L31 [Amyelois transitella])

HSP 1 Score: 122.094 bits (305), Expect = 1.202e-33
Identity = 57/71 (80.28%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    3 PKGEKKG-STMGEVVTREYTINLHKRLHGIGFKYRAPRAIKEVKKFAEKQMGTTDVRVDTRLNKHIWSQGV 72
            PKGE+KG S + EVVTREYT+NLHKRLHG+GFK RAPRAIKE++KFAEKQMGT DVRVDTRLNK++WS+GV
Sbjct:    4 PKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKYLWSKGV 74          
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l31 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 60s ribosomal protein l31 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|134034935|sp|P0C2H8.1|RL31A_YEAST3.414e-2467.21RecName: Full=60S ribosomal protein L31-A; AltName... [more]
gi|134034936|sp|P0C2H9.1|RL31B_YEAST3.977e-2467.21RecName: Full=60S ribosomal protein L31-B; AltName... [more]
gi|51701762|sp|Q6FWF4.1|RL31_CANGA1.871e-2363.93RecName: Full=60S ribosomal protein L31 [[Candida]... [more]
gi|15214262|sp|Q9URX6.1|RL31_SCHPO2.105e-2258.46RecName: Full=60S ribosomal protein L31[more]
gi|1173024|sp|P45841.1|RL31_CHLRE8.344e-2259.09RecName: Full=60S ribosomal protein L31[more]

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BLAST of 60s ribosomal protein l31 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225711882|gb|ACO11787.1|1.807e-4294.4460S ribosomal protein L31 [Lepeophtheirus salmonis... [more]
gi|961377084|gb|ALS05286.1|1.329e-3886.1160S ribosomal protein L31 [Pseudodiaptomus poplesi... [more]
gi|1325277527|ref|XP_023323401.1|4.722e-3884.7260S ribosomal protein L31-like [Eurytemora affinis... [more]
gi|961374986|gb|ALS04237.1|3.273e-3679.1760S ribosomal protein L31 [Acartia pacifica] >gi|9... [more]
gi|961374992|gb|ALS04240.1|3.572e-3679.1760S ribosomal protein L31 [Acartia pacifica][more]
gi|1344808364|ref|XP_023946969.1|4.025e-3483.1060S ribosomal protein L31 [Bicyclus anynana] >gi|1... [more]
gi|700589126|gb|AIU94824.1|7.581e-3476.3960S ribosomal protein [Phragmatopoma lapidosa][more]
gi|914570145|gb|KOB73604.1|9.346e-3478.87Ribosomal protein L31 [Operophtera brumata][more]
gi|268306418|gb|ACY95330.1|1.043e-3380.28ribosomal protein L31 [Manduca sexta][more]
gi|913309900|ref|XP_013185559.1|1.202e-3380.28PREDICTED: 60S ribosomal protein L31 [Amyelois tra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold96_size378025supercontigscaffold96_size378025:307693..310379 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold96_size378025-processed-gene-2.10-mRNA-1snap_masked-scaffold96_size378025-processed-gene-2.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold96_size378025:307693..310379+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold96_size378025-processed-gene-2.10 ID=snap_masked-scaffold96_size378025-processed-gene-2.10|Name=60s ribosomal protein l31|organism=Tigriopus kingsejongensis|type=gene|length=2687bp|location=Sequence derived from alignment at scaffold96_size378025:307693..310379+ (Tigriopus kingsejongensis)
ATGGCTCCCAAGGGTGAGAAAAAGGGCTCCACGATGGGCGAGGTGGTTAC CCGCGAGTACACCATCAATCTGCACAAGCGGCTGCATGGCATCGGCTTCA AGTACCGCGCTCCCCGAGCCATTAAGGAGGTGAAGAAATTCGCCGAGAAG CAAATGGGCACCACAGACGTACGAGTGGACACCAGGCTCAACAAGCACAT CTGGTCCCAAGGAGTCGCAGTCCGGGTCGAGATTTTCGTCGATGGCACGG TCCAGCCCTATCCAGCACGGGCTCAACCGATACCTGGGTGGCGTGCCTGG GCCTAGCTAACACTGGGACTTCACTTGGAGGCGGGATGAAGTGGGAATCA CCGGATTTTTCAGCGGATACGCCGAAATCTGTGCTTACCTTCGGGGAAAC AACAGGAAAAGGAAGGGACAGCTGATTTTCAAAGACAACAATCCTCTGCT AGTTGCGTGAGTCGTCATCCAAGTTCCGCCATCAATGCGACCATGATGCT TTTTCCTCTCCGCCCTGAGACACTAACTCCTAGTCTGATCTTGGTGAACA AGTTGTCCTCTACATCCTTTAAGTTAGTCAACGGCAACGTTCATGACTTG ACTCACTGACGTTGCCGGTCATTGCCATCTCACCTGGAGTGATGGTTGAT TTCATCCCTGCCTTTGATGGCTGGGCTCTAACAAAAATAATCACCCTAAC GGGCCGAAAACGCTGGGTGAACTCTGATTACGCAGATCAGTTCCACCTTG AGGGCGGCCAACTTAGAAGACTGAGAGCACGGTTGCCGGGTTGGCGTTTT CGTGCCAAAACACAGTTTTGGGTTGTTTTCCCAGCGAATTGATGTTTCCT GGGCATTTTTTTAAAGTGACATTTATCCATGTTTAGTGCCGACCTGATCA TTTAACTTTTGTCGACGGTTAGAAAAAAGATCAAGTCATATCCACTACAT ATTCGCCCACAACACATTTGCAATGGTGCGTTTGAAAATGATAATTTGTA TTTGACTGCTCACAATCGACAGATGTGAGCAAGCCATTTGGCTTGTTTTC ACAAGGCCCCGTATAAGCTATAAAACATCGAAATTGGTAAAGTATGCAGA CAGTGGTAAAACATGTAAGAATTGACTTCAAATTAAACACCCGACGAGTA AAAAAACAAATCAAATCAAGGCTACACAATACAGTACGTCGATGCACGAG ACGAACAAAACACAACATACACAGAAACGCAATTCAACACATTACATGTA CATAGCCTTCTCTGCACCAACTCATCCTTTAAGTGAACACACTAGTCAAG AACTTACCGTTATCATGATCCAAATACAAACTATTAAGAGAAGGCGTTGA TTACAAGTGAAGAAGGGAAGTCAGGTTATAAAAAACGTCCTCCATCAAGG GTACAACTTAAGCAGCTTCGCTCTGGACAATTCTCATCATATTTCTCAAC TAAGTTTTTCTTTAAAACCTGGCAGACATGCTTGGTAGAGCCTTCTCTAA ATGGGAGGTACCCTGGATTTCATTCCAAGTCTTCGCAAACATATACTGTA CTTTACGTACAGTATAGGGGAGATTCTGGGGCCAAACTCGATTTTCTTTG GGTAACTTGCATTTATATCCTAGTCTAGAGTCTTTGAATTTGAAATTGAA AACGTGTGACGGGAGTTGTTCCCTTGCGCCTCTCAGCATGAATTGAAAAA TCTTGGCCGTCTTAGTATCTTCTAATTTTATTATTGACAAGTGTTCAAAT ATTGGACTAGTGTGTGTAATCGCACCTTCCGGTGGTTTCGTGTTCTACAC CCCATGGTGAACACAGGGCCCACTGATGTTATTAGCTAATTTAGCTAGTC GCCGTGCAGCCCCGTAGAATCCAGCTCCAGCCACTACTTTAATTTGTGGG GAACCAGAAGGGACCTTTCCTCAAGATGTGGCCGCACCTGTTTTTCCTGA CCCCCAAGAACTAGTAGGGTTACAGGGAGTCGTCATTCACTCCCCTCAGT AGAAGAGTCTGGAGTGGCGATAATTTCTTTATCCGCCGGGCCCGGGAATC GATCTGCGGCCTTTCGGAACGGCAGACTTCTTCGCTGACCACTTCACCAT TCAACCTCCATCTCATAGTGTGACTCTTCCAACTTGAAATTACTATCCAG CGCATGGCTCGCTTTTGCAATTGTTATAAAAGCTGTGTGTCCATGTAGTA GGTTCTTATAACGTTGTTTTTCGTTACTACTAACATGTGTATATACTTAT AAATGGCCCTAACACTATTGACTAGCATTCGTTTGCTAAGTGTTGACTCC CGGGCATATACCAAATTTTATTAAGCAGGAAATAAACGATTACACACACC AGGATTGAAAATATTTTTTCCGACTTGGTCAATACATAAAAGCAATGTGT GCTTTTTTTAAAGGGAATGTCGATCATTGAGCTCGATAATCGATATGTGA AGTGAAATATCGATAGTCGATCATCGACATGAAGTGAAATATCGCAGTTG ATATATCGATATTCGTTTTCGAGAATATTGCAGTCTTAATATAATGACAT CTTTACATTTTTGTTGCCTTTGTAAATACCATAAACTTGTTTTTGTCCTG TATTCAGGTGGATCGTTTTGTTTGTTTGTTTGTTTGGAAGGCCCCGGGCA TTTCTGCCCAGGTAGGGAAATCTCCGAGGAGACATAG
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Synonyms
The feature '60s ribosomal protein l31' has the following synonyms
Synonym
Tk04976
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