maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1, maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1
Unique Namemaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1032_size68796supercontigscaffold1032_size68796:59806..62267 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
cell adhesion molecule 3 precursormaker-scaffold1032_size68796-snap-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1007maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1007Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1008maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1008Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1009maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1009Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1010maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1010Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1011maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1011Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1012maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:exon:1012Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:three_prime_utrmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982152Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982154Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982155Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982158Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:three_prime_utrmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:three_prime_utr-1982166Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982167Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982168Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982169Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982170Tigriopus kingsejongensisexon
maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cdsmaker-scaffold1032_size68796-snap-gene-0.13-mRNA-1:cds-1982171Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1982164auto1982164Tigriopus kingsejongensispolypeptide
polypeptide-auto1982172auto1982172Tigriopus kingsejongensispolypeptide
Tk08172Tk08172Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08172

>Tk08172 ID=Tk08172|Name=Tk08172|organism=Tigriopus kingsejongensis|type=polypeptide|length=282bp
MSEHRELPELGKPGDRTLGAVRLLEDSIIPPHAFRGQKAVLRCNYDLEGD
DLYSIKWYFNQKEFYRYIPSDNPPVTIFKHHSGVNVNPKLSSMKEVVLDE
IDFLTSGQYRCEISGDAPMFQTASAEGLLFVVDLPDSGPDIFGGRPRYTV
GDEVNVTCASRNSLPAAKLSWYVNGEKADSKSIIPHRFETSFDGLQTSKL
GLAFKVDRKHFLEGDLKLKCTATISTVYWKSNEESVQGLGGNQFPPLPHG
NDNNEGLRNSVHGLKDMILQLVLFKWNFLYQL
back to top

mRNA from alignment at scaffold1032_size68796:59806..62267-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1 ID=maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1|Name=maker-scaffold1032_size68796-snap-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2462bp|location=Sequence derived from alignment at scaffold1032_size68796:59806..62267- (Tigriopus kingsejongensis)
ATGAGTGAACACCGCGAGTTGCCGGAACTTGGCAAGCCCGGGGATCGCAC
CCTAGGGTAACCCAATGAAAGATGACTGATTGTTCCACTCTACCATGGCG
CTACGCTGCTTGCCTTGACCTAGAGGTATTGGCCGTGGGCTACGGACTAC
ATGATTTGTGACTGCCGAGGGACTGAGTTTTTGGGTGTGATTGGACTTAT
GTTCGTTCCACTGGGAGCAGAAATGTTGGAACTGACTGGACGTGAAGCAG
GCCCCATCGTCCGTCACTAAGGGTTCAGGTGTGCCAGGGGCAATGAGAAC
GTGAAGTAGGCTGATGCTCTCTGTTGCAGCAGATGGGATTATTGTTGCCA
CTGCATAAATACCTGGAGAGGCTGCACTGGAAGGCCTTGGAAGACTAACG
GGACACGCCATGCTGGGCAACTGATCTGTCCTATTCAGGCCCTCGGCATC
ACCCATGCCTGAGGGCCCTTCTTTTTGGGACACCAAATAGCCTGTTTGAA
GGAAAAATGACTAAGGTTTCGACTAAGGTTATTGCGCTCAGGAGACAATT
CCTAAAGTTTACATTTTCTGTAAGAATTAGCACTTTGTATAGCACCATTT
TTTAAGGTTTCATTAACTTTCAAAGAAGTCTATTAAAAGTTGTAGGACTT
GAAAGTCTTTCTCAAATGTTTGCCTCTGTTTACCGTTGTATCTGTTTACC
TCGAACCATCCTCTATTGCTGGCGCTGTCAGGCGTTTTGGGAAAGCCTCT
ATGTAGAAAGCTTGATTGTCCCTAATATATCCAGGAATAAATGGATACCC
CAAAAATAACAATCGGATCTAGATTTTGAAACTCGGCATTTGGTGTCCCT
CCTATCTTTGGAGGATATAATGGAACATGTCTTCAAATACCTACCAATAT
CCAGAATTGGCGTTTATTGGAATTTTGCGAGGTTTCCGGCTTTCGCTATT
CTTTCTCTTGTGCTTTAATAATGGTGAGTACTGTGATTCTCAATTGTTTT
GGAATAAGCTTTACTCTAAAAAAAAAAAATTCAGATTCCAGTGCTGTTCG
ACTCCTGGAAGATTCTATTATACCTCCACACGCTTTTAGAGGTCAAAAAG
CTGTTCTTCGATGTAATTATGATCTTGAAGGAGATGACCTCTACTCCATC
AAATGGTATTTCAACCAAAAAGAATTTTATCGGTATATACCATCAGATAA
TCCACCAGTTACCATCTTCAAACACCATTCTGGAGTAAATGTGAACGTAA
GGTCCAACGTTAAATTATCTGTTTTTCAATAGTCTAATTGTTATTTTTTT
AGCCCAAGCTCTCATCCATGAAGGAAGTCGTGCTAGATGAAATTGACTTC
CTAACCTCCGGTCAGTATCGCTGCGAAATATCGGGCGATGCTCCAATGTT
CCAGACAGCGTCTGCAGAGGGATTGCTCTTTGTTGTAGGTAAGTTATTTT
CAGATTGTTCTTCTTTATTATGACTTCATGGCATGACTTTCCAAACTGGA
AATTAATTAAGTTAATTACAGGCTGTCTATGGCCTTACTGCCTAGGGAGC
ACTTTGGGATAGATTAAATAGGTCTTGAACGAAACATTTCTCACAGATCT
TCCCGATAGTGGACCAGACATCTTTGGTGGGCGTCCAAGATATACAGTGG
GAGATGAAGTTAACGTTACATGTGCCTCGAGAAATTCTCTACCGGCTGCT
AAGCTATCATGGTATGTCAATGGAGAAAAGGCAGATTCAAAAAGCATAAT
TCCCCACAGATTCGAGACAAGCTTCGATGGGTTGCAAACATCAAAACTTG
GTTTAGCTTTTAAGGTAAGTTTGATTTTTGGATGGATGTTGGATGGGAGA
TGGACAAAACTTTCTTTTATAGGTTGATCGTAAGCACTTCCTAGAAGGCG
ATCTGAAACTGAAGTGCACAGCAACAATTTCAACTGTTTACTGGAAATCA
AATGAAGAATCAGTTCAAGGGCTTGGTGGTAACCAATTTCCTCCATTACC
ACATGGAAATGATAATAATGAAGGTGCGCCATTCCCAAAATTTCTTACGG
ACCTAACCAACGTTTTTTATTACAAACAACGTTGCGACCTCATCCCTCCA
TTAATATAATGTTCTTTGGCACGTAATGGTTGCAACCATAAAGTTTTTTT
AAGGGTGAAATAGTTTCGTGGGTTCCTTCAATAACCAATCATGTTAGTCC
ATCATTTCAAGTTTATTACAATGCAACAAACCCTCCATTTTTCTTCAGGT
TTACGAAATTCTGTCCATGGTCTAAAAGATATGATATTGCAGCTCGTTCT
TTTCAAATGGAATTTCCTTTATCAACTCTAGCCAACACTGAACGCCGGTG
GAAGGATGTTGTGTTCTTAACACAATTTTTGTTGATTATTTTGAAAACAA
TTGTTTGAATCTCGACAGTAACATTGATTAATTCTCAGAAATACATCACA
CTTTTTTGACGA
back to top
Add to Basket