maker-scaffold103_size370364-snap-gene-0.19-mRNA-1, maker-scaffold103_size370364-snap-gene-0.19-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold103_size370364-snap-gene-0.19-mRNA-1
Unique Name	maker-scaffold103_size370364-snap-gene-0.19-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold103_size370364	supercontig	scaffold103_size370364:34935..42140 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
opsin	maker-scaffold103_size370364-snap-gene-0.19	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1972631	auto1972631	Tigriopus kingsejongensis	polypeptide
Tk07511	Tk07511	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold103_size370364:34935..42140-

protein sequence of Tk07511

>Tk07511 ID=Tk07511|Name=Tk07511|organism=Tigriopus kingsejongensis|type=polypeptide|length=909bp
MSSFCCISRPAITRKFSELMNQKNFSNQNTLRALVMLVMAATSFSVCLVL
RSADFMATEWDCKVLISLEPADFFCTAQIEVNVHDDITGHRIHGLLGLTI
VLCLQVSVGITQVHAEVIGLQLEGLNPRGHRVTVGRGLGHQLLDGRPFDL
VGQGRANDHQRIVDQDFVHFDELCLASVLNLLVLKLDQSLLVVLLDVLQL
LHGLFLLAHGLHLDLLTLHLTEKLVHGPIKALKLDHGLIPELGQAIGMKV
QIGQELSRPAVSPGSEVTALNDVAASRLRGHELGGLSPDDGHEEGIMLLR
DPVASHLHRAGQTGLEQEVSEEGRSVLEVGRDQLLEAVAGLGLIPDGRPG
RQREGFHALAGQLDGVGLADQELVLALDPGSEDGEDVVLKVGEHHVAPII
QLEDEMVRGLEAAELEVHHPVHAHLPDGLEALVLEVLAQLHGEARGRRIL
GPLELGGVETRAGLEHEHALGLGRADEAEEVGLVVHVVDLVEPHAHQALE
LAQLGHQVQGGEARLHGGGHSARGFTTRRGSEPNESIIDLLHAGIKLKDL
TLAMIRADRRTKITDGIPAGLESVLPDIWKNYPPEHPMITDFFAVVIFIL
WGINVVGNGLVIFVFLTTKTLRTPTNMFVVNLAFSDLCMMTFMGPSVAVN
AFVSDYWIYGALYCQLYGLIGAIFGTASLLTMVVIGFDRYNVIVKGMAGT
RITGCKAFSVLLFIWVYVILGALPPFFGWGGFALDGLLITCSYDYYTYDW
NKLSYCLFAFVTHYFLPLLLVMFYYGSIVKAVVQHERALKAQAKKMNVTS
LRSGGDEGQSAEIRICKVAITNVSLWFLAWTPYAVVFMFPIFGKLHWITP
LMSQLPIFFAKTASCFNPVVFALSHPKYREALASKCPCFGIHEQASKAAD
EKTQAVSTN

mRNA from alignment at scaffold103_size370364:34935..42140-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold103_size370364-snap-gene-0.19-mRNA-1 ID=maker-scaffold103_size370364-snap-gene-0.19-mRNA-1|Name=maker-scaffold103_size370364-snap-gene-0.19-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7206bp|location=Sequence derived from alignment at scaffold103_size370364:34935..42140- (Tigriopus kingsejongensis)
ATGAGCTCGTTCTGTTGCATATCGCGACCCGCGATCACCAGGAAGTTCTC
GGAGCTGATGAACCAAAAGAACTTTTCGAACCAGAACACTTTGCGGGCTT
TGGTGATGTTGGTGATGGCTGCCACTTCCTTCAGTGTCTGTTTGGTCTTG
CGCTCGGCGGACTTCATGGCCACGGAATGGGACTGCAAGGTTTTGATCTC
TTTGGAGCCGGCGGACTTCTTCTGCACGTAGTATTTCCTCGCGTTGGCTT
GAGCGCTCAAATCGAGGTCAATGTCCACGATGACATCACGGGGCACCGGA
TCCACGGCCTCCTCGGTCTCACTATCGTCCTCTGCCTCCAAGTAAGCGTA
GGGATCACTCAAGTGCATGCTGAAGTGATTGGTCTCCAACTTGAGGGCTT
GAATCCGAGAGGCCACCGGGTCACCGTTGGCCGTGGCCTCGGCCACCAGC
TCCTGGATGGCCGGCCATTCGATCTGGTTGGCCAAGGCCGAGCGAATGAC
CATCAGCGCATTGTCGACCAGGACTTCGTTCATTTCGATGAGCTCTGCCT
TGCGTCGGTCCTGAACCTGCTCGTGCTGAAGCTTGACCAGTCGTTGCTCG
TGGTCCTTCTGGACGTTCTCCAGCTTCTTCATGGCCTGTTTCTCTTGGCC
CATGGCCTTCATCTCGATCTTTTGACTCTCCATCTGACTGAAAAACTCGT
CCACGGCCCGATCAAAGCGCTCAAACTCGACCACGGGCTGATCCCCGAAC
TGGGCCAGGCGATAGGGATGAAAGTCCAGATAGGTCAAGAACTCAGTCGC
CCCGCCGTCAGCCCGGGGTCGGAGGTCACGGCGCTGAACGATGTAGCCGC
GAGCCGGCTGCGTGGCCACGAACTCGGGGGCCTGAGTCCCGATGATGGTC
ATGAGGAGGGGATCATGTTGCTCCGGGACCCAGTCGCGAGCCACCTTCAT
CGTGCCGGGCAGACCGGCCTCGAGCAGGAGGTGAGTGAGGAGGGCCGGTC
CGTACTCGAAGTGGGGCGTGACCAGCTTCTTGAGGCTGTCGCCGGGCTGG
GCCTTATCCCGGATGGCCGTCCAGGCCGCCAGCGTGAGGGGTTCCATGCT
CTGGCGGGTCAGCTCGATGGGGTAGGTCTCGCGGACCAGGAACTTGTCCT
CGCCCTGGACCCGGGGTCGGAGGATGGTGAGGATGTTGTACTCAAAGTCG
GTGAGCACCACGTTGCCCCGATCATACAGCTCGAGGATGAGATGGTGCGC
GGCCTCGAGGCTGCCGAACTGGAGGTCCACCACCCGGTCCACGCCCATCT
GCCCGATGGACTCGAGGCGCTTGTTCTTGAGGTGCTTGCGCAACTTCATG
GTGAAGCCCGAGGGCGCCGGATTCTTGGGCCACTCGAACTGGGTGGTGTG
GAGACGCGAGCCGGACTCGAGCATGAGCATGCTCTTGGCCTCGGGCGGGC
GGATGAGGCGGAAGAGGTAGGCCTTGTGGTCCACGTCGTAGACCTGGTTG
AGCCGCATGCCCACCAGGCTCTGGAGCTCGCCCAGCTCGGCCATCAGGTC
CAGGGTGGAGAAGCGCGACTTCATGGCGGTGGCCACTCGGCTCGGGGGTT
CACAACTCGGCGGGGCTCGGAGCCCAACGTGAGAACTGAGCGTACGTCAC
TGCTACGTGAGGTCGGGATCCTAGGCGGGATTGGCCCCGGCCATGAGAAA
AGGAGGCCAGTGGAGGCCGAGCCACGGAACCCTGTCCATCTGGAAGTATT
ACTAATCCACGTCTACTCCTAATGGTTTGTACGTGGCTTGACTAGTGTGT
TCACCGTAAAGGATGTGTTGGTGCAGAGAAGGCTGACGTATACATGTCGT
GTGTTGAATTGCGTTTCCGTGTATCTTGTGCTTGGTTCTTCTTGTAAGGC
GAGCAGCGTGGCGCAATGGTAGAGTGGCACAATCAGTCATCTATCATTGC
GTTATCCGAGGGTCGTGGGTTCGATCCCCGGGCTGGCCAAGTTCTGGTAA
CTAGTGGTGTTAACTCACAGCTACTGTTGGCTTCCCTGGCGGGATTAATG
TGGGCGTACCTGTGGTACGTAATTCCTCGACGGTATGGTAATAATTCATG
ATAAATTTGACTGCCAGGCTGACTATATCTCCACGGAGATTTCCCTAGCT
GGGCAGAAATGCCCGGGGCCTTCTAAACAAACAAACAAAAGTTCTTCTTG
TGTTTCAGACTTGATTTGAAATGCCCGGGGCCTTCTAAACACACAAACAA
AAGTTCTTCTTGTGTTTCAGACTTGATTTGATTTTCATTTTCCTTGGAGG
GTGTTTGATTTGAAGACAATGTTTTCCATGTTTGACGACTGCCCTCATGT
GTGTGTGTGTGTAATCGTTTATTTCCTGATTAATAAAATTTGGTATGTAT
GCCCGGGAGTCAACACTTGGCCAACGAATGCTAGTCAATAGTGTTAGGGC
CATTTATAAGGATATACACAGGTTAGTAGTAACGAAAAACAACGTTATAA
TAACCTAGTATACTGTAAACTGTACAAAACAAAAGAGCAGAATAATGGAG
AAATATAATAATAAATGTTAACAAGGCTATACAAATCAATAAATGTGCAC
AGAACTAATAGAAACACAATAAATGTGACACGACATAACCAAGACACTAA
CTTTAACACTAACCAGACAAGGGTTATGACAATATGGCTCTCGACAGAAG
CTGTAAAGAATAGCACATAAATGTGTGTAAAAAAAAAGTATCAACAACAT
ATTAAACAACAGAACTGGACGACATTGATCAAATAGGGGCCGATCTGGAT
ATTGATTTGGCTACGTTCGAAGCCATCCGCTTGGTACTGGCTTCTCGCAG
GGCTGGGAACTTGTTCCACATGGCGATTCCGTTGTCCATCAGGGTGTTGG
CTGCGTAGGAAAGATGCGGTGAGACAACTCCTGCTGCCTCCGACCTGGTC
GACCTCGATGCAACGTTGGCAGGGAAGAGAATCTGGCCGAGGGCGTTCCT
CGAGCCATCCGGCCCATCTTGACTGTGGATGTTTTAGCAGTTTTGATGTT
TTGTAACCTTTACTGGCCCTGGTGAAAACAAGCCAAATGGCTTACCAAGG
GTCAGGACTGCTCCCCTGTAAATACCATTGACACCTATTTATCCTCTTCC
ATCTGTCGATTCTGAGCAATCAAATTCAAATACGTATACTAATCGGGCAA
GCTCCTACCCTTAAAGAACAACAATGGTCACACTGGACCACGATCGCCGG
GATGCCAACGAGACTGAGCTATGCACTGCTATGTAGCTAACTTAGCCATG
GTCGTGAGTGTCAATCTGTCACCCATTAGCGTTGTATTGCCCCTTATTGG
ACAGTATTTGAGACCAACTCAGTGTCATAGCAGGCAGGAATATTTCCCAA
TCGCCCTCTTTCGATTCTGGAGGGCTGGCTTTTCAGTACATAAGCAATAT
ACTGATATGTACAGCCTTCCAATTCGATAAAGGTGCTTCTTTCGTAGGTT
TGATTCTAGGTAAACTCTAAGCCACCCAGGATAATTGCTCGATGGGCTAA
TTTCCCGCCCAATGGCCTGATCAGGGGTCGCTGGCCACCCCCTGAAAGGC
CACTCCATAGCAGTACATAGACCCGGATGGTGGACATCCTTGCGACCTCA
AAAGCTTGAAAGGTTGCGAGCGTGCCTGAAACTTCTGCCGAATAATCCGT
CTCGATTAGTATACGTATACAAATTACTTACAGACCCCCCCTCATGACCA
TCATCGGCACCCGGGCCTCTGAGTTTGTGGCCACGCAGCCGGCTCGCCGG
ATTGTACATGGCCAGACTTTGGGCCAAACTCAAAAGTGATCCAATTTTCA
GAATGGAAATCCAGCAAGAAAAAGCTGGCCTTGGTCGAAGTTTTCAATGA
CGAAAACGAATGCCAGATAATATGACTGACTTTGGGCCACGCTGGGAAGC
TCTCATTGATGTCAGGCTGGTCACGTTCAGCCTTTTAAGGCTGGAATAGT
CGTGATTATCTATTTTGACCACCAATTTCGTCCGAAATGCATCTGTATTT
CCGATTTGAAAATCTGGTCACTTTTGACGTGGGCCCTAAGTCTGGCCAGC
CTATAATTCTTCCATGTGTACAGGGTTGCATGGCCGATCCCGATTTTTGT
GATTTCCACAATTTTTTTCCGATTTTCGCATTTTTGCTTCATTTTACAAC
ACTTCTTTCCCCTTCGCGACTTTGGTTTTCATTCTGAGCCCTAATGAGTA
CGGAAAAAACGTTTAGGGCATCAAAAATGGTATTCTGGCCGCCGTGCCAC
CGTAAAAGTGTCTCTTTCATAGAGTGATGAAGCATTAATGTGCACCTCAT
TGCCTAATGGAGGCATTTAGTCTGCTCTAAGGCTCCTCTCAATTTATACT
TTTTCCAAGTTCTACTCTTACGTCTCTCGAAATTCCACCCAGTCTAGTCA
TTGATCAAGGACGCGCCTTAATCTTCTTAACGGATTTGCGGTGGATTTGA
ATGATTGCACGTTCCCGTCGGCCATTAGATAGCAAAGATCTGCCAAGACA
CACGATTAAGAGATCTGTCGTGCCCAGCCACCATGGGAGACAAAAGCTGC
CTCGAAGACACTCTTGGGAAATTCGTTATATGCAAATTTTGTCCCAAGTG
CCAACATGGCGGCCTATAAAAAGTAGAATTTGCATTTAAGCCAGGGTCGC
TAATTTAACGCGGAAAATAACTCGTCAAAAAAATGAATCTTCAATTCTCA
GTTAGAGGCGAAACTAGCGAACGCAGGAAGGAAAAAATGTCACCTTGTTG
AACAAGCTACAGGGTTCGTAGAATGAACTTAGAATTAATGCTGTTAAAAC
TGTGGTTTCAAGGTTGGTAGCAGCTTAGAGTCTTCAGCTTTTTCAAAGGG
TCGAATGTTGACACCAATAACACAAAAAAACATTTCCCCTCTTTGTGCTC
GATTTCATTAGAGGAGAGCATCATCGATCTCCTCCACGCGGGCATCAAGC
TGAAGGACCTCACGTTGGCTATGATCCGAGCTGACCGGAGTGAACCTTCT
CCATATCGCTCCCGGCTAACCCCGGCATTTTTGTCATAAAGTGTCTATAC
AGACACCTTGAATGAAATCGCGATGGCCTTGGTTTTGATGCCCGCGTTGA
GAAGATCGATGATGCTAGTCTCCTCAACCATTGAAACGAAGCCTGGAAGC
AAGCGTGTTTGTTTGTAGTATTAGTGTCTTTTTATTCACCCCTTTGAAAA
GGCTGAGGACTCAAAATGTCTGCTACCATTTTTGAGAGTACACTTATAGC
GTCATTATAATAATTCCAAGCTTCTTCCACGCACTCTGTAGGCATGTGCG
CTATTGTTTGCTTTACGTGTAAAGTGGGACAATTTTCTCGGATATTCGAG
AGTCTCAACCTGTTTTATCGCTGAAGTTACATAGGTTCTCTACAATAAGG
GGCCTAGAACATTTGCAGAAGCTGACAGTTTGCCCGTGGTCTCAATGCGC
GAAGTACCGAACCGTTGATCTGAAAGGGCTTAGGAACGACGTCGACAAAG
TCAAGGTTTTGGGAAAAGAATTTAAGGGACACGTTCTTTGTTAATCCCCT
CAAAGTCACTGTCCCTGTCAGGGAAGACCCACAATGTAATACAATCAAAG
CTTGAACATGCACATGGGCGAGTATATAAGAATCTCAGGGGCTAGTTAAT
GTGTGGCAGTGTTGGGACGACCCTTGGTTATGTGTAATATTCATCAGGGC
TCAGATTAACTACTGGAAACCACCTCAAACTATTGGGCATCATGGATCCT
GGCAGAGTTTACATTGACTCTGCCTACAACATGTATTACACTGAAGGCAA
GCTCTACTTTCCAAAACCTCATACGGGCTGAAATCTAAGCGGGAAAGGGT
TGCTTACAGGGACCAAAATAACGGACGGTATCCCAGCTGGATTGGAGTCT
GTCCTGCCCGATATCTGGAAAAACTACCCACCAGAGCATCCAATGATCAC
TGATTTCTTTGCTGTGGTAATTTTCATTCTTTGGGGGATCAACGTGGTCG
GCAATGGATTGGTCATCTTCGTCTTCTTGACCACCAAGACACTGAGAACA
CCAGTAAGCGGAAATCAATGCACTAGTCAGGGGTCTTTGATTGAAAATTG
TCCGCTTTCAGACAAACATGTTTGTCGTCAACTTGGCCTTTTCCGACCTC
TGCATGATGACCTTCATGGGCCCTTCAGTGGCGGTCAACGCTTTCGTTTC
GGACTACTGGATCTATGGGGCGCTCTACTGTCAGCTGTACGGATTGATTG
GCGCCATTTTTGGAACCGCTTCCCTCCTCACAATGGTGGTAATCGGCTTT
GATCGATACAATGTGATCGTGAAGGGCATGGCCGGGACCAGGATTACGGG
GTGTAAGGCCTTCTCAGTGCTCCTCTTCATCTGGGTCTATGTGATCCTCG
GGGCTCTCCCGCCATTTTTTGGATGGGGCGGTTTTGCTTTGGGTAATGGC
GGACTGCTCGAGGACTTGGGATGGTCGGGATGTATTCACGGCTTCTTTTT
CAGATGGACTGCTGATCACGTGCTCCTACGACTATTACACATACGACTGG
AATAAACTGTCCTATTGCCTCTTCGCATTCGTCACTCACTACTTCTTGCC
TTTGCTTCTGGTCATGTTCTATTACGGAAGCATTGTCAAGGCTGTGGTCC
AGCACGAGAGAGCATTGAAAGCCCAGGCCAAGAAGATGAACGTGACCAGT
CTTCGATCCGGTGGAGTAAGTACCCATTCCTACTTAGACCACCCACGGCC
TCTCTAATATTGGTGGCCATGCATCAACAGGATGAGGGTCAGAGTGCCGA
GATTCGAATCTGTAAGGTGGCCATCACCAATGTGTCCCTCTGGTTTCTGG
CTTGGACTCCCTATGCCGTGGTGTTCATGTTCCCAATCTTTGGAAAACTG
CATTGGATCACGCCTTTGATGTCTCAGCTGCCCATCTTCTTTGCCAAGAC
GGCTTCCTGCTTCAACCCGGTGGTATTTGCCCTTAGCCACCCTAAGTGAG
GAAACAAACAATGCATAATGTCTAAGGACCTTCATTCAATTTTTTTACAA
TTGTAGATATCGTGAGGCGTTAGCCTCCAAATGTCCTTGCTTTGGAATCC
ATGAGCAAGCAAGCAAAGCGGCCGACGAAAAAACTCAAGCTGTGTCCACG
AACTAA

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