maker-scaffold103_size370364-snap-gene-1.24-mRNA-1, maker-scaffold103_size370364-snap-gene-1.24-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold103_size370364-snap-gene-1.24-mRNA-1
Unique Namemaker-scaffold103_size370364-snap-gene-1.24-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold103_size370364supercontigscaffold103_size370364:180881..182991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
g-protein coupled receptor family c group 5 member c isoform x1maker-scaffold103_size370364-snap-gene-1.24Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1233maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1233Tigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1234maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1234Tigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1235maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1235Tigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1236maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:exon:1236Tigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:three_prime_utrmaker-scaffold103_size370364-snap-gene-1.24-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cdsmaker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cdsmaker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cds-2006919Tigriopus kingsejongensisexon
maker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cdsmaker-scaffold103_size370364-snap-gene-1.24-mRNA-1:cds-2006920Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2006921auto2006921Tigriopus kingsejongensispolypeptide
Tk07515Tk07515Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07515

>Tk07515 ID=Tk07515|Name=Tk07515|organism=Tigriopus kingsejongensis|type=polypeptide|length=492bp
MNEPMESDPDNVLDPLSFQSRGGSSDSNFITKMNTQFFALPGLPPLEQEP
DTNRGSRQMCSDWGSTKCLEDLVTNKTLIGEGDSWGGYGGILFRDTWMIP
MLTLSAINVIMILTFEVYVLCKASRNTPSRRHLFLGQMLLLGLLIGSLVG
FAYAVEPSDLTCSAIRLGTGFAYTLIYSSLLVKLVFLISLNTGVYLPATY
QALLFLFCILVQFVIGLQWISSSGPLCSFATRDHLLSLLYVVFLIVFCST
LAVKSRTFRDNYREAKYIGGLMLITIPVWLGWVIGSIVLHESYHPAIVGF
GLLTVCAITFIIMFLPKSRQLSAIGKEGIYIEDQDDRFSIHSDRYSPSFY
HFKPHKTILSPGSLFKEPRPESPYFRAGFHRPLRVVPPSATPSQQAQITP
PSSSHMAPPHSHAAPPPPPYTTRTSYFPSHFFPEKMNHYWQYYYPRAPGI
FPRHDPESLNIYTSLRDTDRTKSMNPNVYFYKSNNYHPGFIY
back to top

mRNA from alignment at scaffold103_size370364:180881..182991-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold103_size370364-snap-gene-1.24-mRNA-1 ID=maker-scaffold103_size370364-snap-gene-1.24-mRNA-1|Name=maker-scaffold103_size370364-snap-gene-1.24-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2111bp|location=Sequence derived from alignment at scaffold103_size370364:180881..182991- (Tigriopus kingsejongensis)
ATGAACGAGCCCATGGAGAGCGATCCAGACAACGTGCTGGATCCCCTCTC
ATTCCAGTCTCGAGGAGGCAGCTCCGATTCCAACTTCATCACCAAGATGA
ACACGCAGTTCTTTGCTCTTCCGGGGCTACCGCCCTTGGAGCAGGAACCA
GATACGAACCGGGGCTCTCGGCAAATGTGCTCGGATTGGGGCTCGACCAA
GTGTCTGGAGGACCTGGTCACGAATAAAACGTTGATAGGTGAAGGGGACA
GTTGGGGTGGTTATGGTGGAATCCTGTTCCGGGACACGTGGATGATCCCG
ATGCTCACACTCTCGGCCATAAATGTGATAATGATACTGACATTCGAAGT
GTACGTCCTGTGCAAAGCCTCCCGAAACACGCCCAGTCGGCGCCACTTGT
TCCTGGGTCAAATGTTGCTCCTGGGACTGCTCATCGGCTCACTGGTCGGG
TTCGCCTATGCCGTGGAGCCCTCGGATCTGACTTGCTCAGCCATCCGCTT
GGGGACGGGATTCGCCTACACTCTCATCTACTCATCGCTCCTAGTGAAAT
TGGTGTTCCTGATCTCGCTGAACACTGGCGTGTACCTACCGGCCACCTAT
CAGGCCCTCTTGTTTTTATTCTGTATCTTAGTCCAATTTGTGATTGGCCT
CCAGTGGATATCTAGCTCCGGTCCGCTCTGCAGCTTCGCCACCCGAGACC
ACTTGCTCTCCCTACTCTATGTGGTCTTCCTCATTGTCTTCTGTTCCACC
CTGGCGGTCAAGTCTAGAACATTCCGAGACAACTACAGAGAGGCCAAGTA
CATTGGCGGTCTCATGCTCATCACCATTCCAGTTTGGCTGGGTTGGGTCA
TTGGGTCTATCGTCCTCCACGAGTCATATCATCCTGCAATAGTTGGTAAG
ATATCGATCAAACTAATTGGGCTTCCTTCAGCACACTCTTACATCTTACG
TCGACAGCAATATCGACATATCATAGGCCGAATATTATTTAAAATGCGCA
ACGAATAACTTGTAGGAGCCACCACTAAACAACTAGCAATCAGTCTTAAT
TGTTTTTTAATTACATCAACACATTTCATAATTGATTTTTTTAGCCAAGC
AATCAATCATTCCGGTGATAATGCGGGAGAACCCTCAAAACAGTAGCACA
GGGATAGTTAAAAGTATTGAAGACGTACAAAAGTACATGTATGTATTTAT
AGAGAGAGCAAAGTATCATTTTGCTTCAACTATTCCAGGATTCGGTCTTC
TAACTGTTTGTGCCATCACCTTCATCATCATGTTCCTCCCCAAGAGTCGC
CAATTGAGTGCCATTGGCAAGGAGGGGATTTATATCGAGGATCAAGATGA
CCGCTTCTCCATTCACAGTGACCGATACTCGCCCTCCTTCTACCATTTCA
AGCCCCATAAGACCATCTTGTCGCCTGGATCCTTGTTCAAGGAGCCCAGA
CCCGAGAGTCCTTACTTTAGAGCCGGTAATTCATACACAGGTGGGTGTGG
CCTGCAAGGTGTGCGAGCACGGGCTTAGGATTGGATCTTCTTTGAGCGGG
CCGTCATGTTGATCTTCGTTTCAGGTTTCCACCGTCCCCTGCGGGTGGTT
CCTCCCTCGGCCACACCCTCGCAGCAGGCCCAGATCACGCCTCCCTCCTC
GTCGCACATGGCCCCGCCTCACAGTCATGCTGCACCGCCCCCACCACCCT
ATACCACGCGCACCTCCTACTTTCCCTCTCATTTCTTTCCAGAGAAAATG
AACCACTATTGGCAGTACTACTATCCTCGCGCACCAGGTACCTACTACCC
AGTTTACTCGTGTAAGCAGCACTCTTTCATTTCATTTTCATGCACCATCA
CTACTTGCTCGCACACACCATGGATATGGTACCAGATTCAATACCAATAG
CGTCGAATAGGTAACCCAGGGGATTGATACTCGTCGTTCTCTCTCCGTTG
TAGGAATCTTTCCCCGCCATGATCCGGAGAGCTTGAACATTTACACATCG
CTCCGTGACACCGATCGGACCAAGTCCATGAATCCCAATGTTTACTTCTA
CAAGTCAAACAATTACCATCCAGGATTCATTTATTAGCGTCATTCACAGT
GCTCGACTGAT
back to top
Add to Basket