maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1, maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1072_size64607-snap-gene-0.14-mRNA-1
Unique Namemaker-scaffold1072_size64607-snap-gene-0.14-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1072_size64607supercontigscaffold1072_size64607:40331..42386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PREDICTED: uncharacterized protein LOC755078maker-scaffold1072_size64607-snap-gene-0.14Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:3maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:3Tigriopus kingsejongensisexon
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:4maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:4Tigriopus kingsejongensisexon
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:5maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:exon:5Tigriopus kingsejongensisexon
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:five_prime_utrmaker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:cdsmaker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:cdsmaker-scaffold1072_size64607-snap-gene-0.14-mRNA-1:cds-1974864Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1974865auto1974865Tigriopus kingsejongensispolypeptide
Tk04380Tk04380Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04380

>Tk04380 ID=Tk04380|Name=Tk04380|organism=Tigriopus kingsejongensis|type=polypeptide|length=314bp
MGQCSAPECGNRYGDGLKIFRFPIDPIRRQKWTKEMNRPKWIPNDNARLC
EGHFTRDQFFLHGGTGRKVLRHDAIPTQFSLTPSDKVAKVTCIKPLTRSG
SRTQSGTKVRIDQINVIAAAPIELETPENGLADSLKSSHFEAPPSVDFMP
KDEPLDSDQESLPVSVTTSSLDSRQFFVDANDFEMEEDPLEEPFQPDSSS
VPNDKLMDSSRIVQLEAQLKTMNTKHLRILKEVATLRKAARFLQNDELRL
ASKSKNLQSGQAGEWTPESLEKAQLIRSTCGATGYRTLQDLNYSLPSLRT
LLLWRKGLSRDPPS
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mRNA from alignment at scaffold1072_size64607:40331..42386+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1 ID=maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1|Name=maker-scaffold1072_size64607-snap-gene-0.14-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2056bp|location=Sequence derived from alignment at scaffold1072_size64607:40331..42386+ (Tigriopus kingsejongensis)
CTCTGCTAGTAAACAAAGTCAGCTGCTATTGTGCCCAAGCATAACACGCA
CAATCGGATTATTAAGCTAAAAATAATCAGTCCCAAAAGTGCACAATGGG
TCAATGCTCGGCTCCGGAGTGTGGCAACCGATATGGTGATGGACTTAAGA
TCTTCCGATTTCCTATTGATCCCATCCGAAGACAAAAATGGACAAAGGAA
ATGAATCGTCCCAAGTGGATACCAAATGACAATGCGCGACTGTGTGAGGT
AATGCGGCTTAGCTCGATCCTTAACTACCCTGGATTACAATAATGGGAAC
GCTATTTTATTGTAAGAGTCTTACGAAAATACATCATTACCATATGTACA
GGGTGACCAGAATGTCTTGGAACGCGGCAAAAGTTAAATAACTCAGAGCT
TGAGAGTGTCACAAAAAAATTATTTTCTCCCAAATTGTTCAGTGTCTTCA
GGATGACATGTTTGAAAGTTTATTACTCGCAATAACTCCCTTTGGCAGCT
ACAACAGCACCCAATCTCTTCCTAACTGATTTGCAAGATCGCCGGATCAC
GTCCTCGTCGAGGTCAGCCCATGCAGCCTCTAAAGCTGACTTGAGGCTGT
TAACGCTTTTATGCGTTTTGTAACCCACCTTCCTCTCTAGAATAGACTAT
ATTGCAAAGTCCATGACATTAAGGTCTGGGGAGGAAGGGGGCCACATTTC
CTTGGACCAGAACAGCGGAAAGTTCTCCTTGCACCAGGCCTGGACCAAAA
TTGTAGATAAATAGCCACTACTGTCAATTATGCGCTTAATTTGAGTAAAT
TATGAGATGCTAGGGTGCTCTTAGTTCTCAACGCTCTGGTTCAACGAGTA
AATATAATCTCGTATGCCTGTAAAAAAAAAGTGTCACTTTCTAATCATTT
CATAATATAAGCCGACCTTTCGAATCCGTAAAACCATTTAACGCAAATAT
CATATCAATTTGTATAACTATATAAAAAAAAGCCTTGCCTCGGTGTAACA
AAACACCTTTTAGCTTGTACTAAGTACAGATGGAATATATTGATCGACAG
AGGCTTTGAGACCAACAGCGAGTTTTGATAAGTTAAAAGAGCTGCGATTG
AGCTTTTATTATGTATTATTATGTACTTATCAATATTATTGTGTACTTTT
AGCCGCTTATGATGCGAAGCCCTTTTCATTGTAGGGTCACTTTACCCGAG
ATCAGTTTTTCCTCCACGGTGGGACGGGTCGGAAAGTTCTTCGCCATGAT
GCCATTCCCACCCAATTTTCTCTCACGCCCTCCGACAAAGTGGCCAAAGT
AACCTGCATTAAGCCACTCACTCGATCTGGGTCCCGAACCCAGTCCGGGA
CCAAAGTCCGGATAGACCAAATCAACGTCATAGCTGCAGCTCCTATTGAG
CTAGAAACGCCCGAAAACGGGTTAGCCGACTCTCTGAAGTCATCGCATTT
CGAAGCACCACCTTCGGTTGATTTCATGCCCAAGGACGAACCCTTGGACA
GCGATCAGGAGTCGCTGCCAGTTTCGGTCACCACTAGCTCATTAGATTCT
CGACAATTCTTCGTTGATGCGAATGATTTTGAGATGGAAGAAGATCCTCT
CGAGGAGCCCTTTCAACCAGATTCAAGTTCCGTTCCTAACGACAAACTCA
TGGACTCGTCTAGGATTGTTCAGTTGGAAGCCCAACTGAAGGTAATGCAT
ACACCATGTGAGCCTATCAGAGGACCGTTTTTATCTCATCGGATTGTTGG
TTCCAGACCATGAATACAAAGCATTTACGAATCCTCAAAGAGGTTGCCAC
ACTTCGAAAGGCTGCTCGCTTCCTCCAAAACGATGAACTCCGACTGGCTT
CCAAAAGTAAGAACCTTCAAAGTGGTCAAGCAGGAGAGTGGACCCCAGAA
TCGTTGGAAAAGGCTCAACTAATTCGATCCACGTGCGGAGCAACCGGGTA
TAGAACCCTTCAAGACCTCAACTATTCCCTTCCTTCCTTAAGGACACTCT
TATTGTGGAGAAAAGGTTTGAGCAGGGATCCCCCTAGCTAGCCCTAAAAA
ATAAAC
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