maker-scaffold112_size353035-snap-gene-2.44-mRNA-1, maker-scaffold112_size353035-snap-gene-2.44-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold112_size353035-snap-gene-2.44-mRNA-1
Unique Namemaker-scaffold112_size353035-snap-gene-2.44-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold112_size353035supercontigscaffold112_size353035:296336..301061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
f-box-like wd repeat-containing protein tbl1xr1maker-scaffold112_size353035-snap-gene-2.44Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1589maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1589Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1590maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1590Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1591maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1591Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1592maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1592Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1593maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1593Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1594maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:exon:1594Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:three_prime_utrmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cds-2015730Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cds-2015731Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cds-2015732Tigriopus kingsejongensisexon
maker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cdsmaker-scaffold112_size353035-snap-gene-2.44-mRNA-1:cds-2015733Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2015734auto2015734Tigriopus kingsejongensispolypeptide
Tk07409Tk07409Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07409

>Tk07409 ID=Tk07409|Name=Tk07409|organism=Tigriopus kingsejongensis|type=polypeptide|length=379bp
LEGDARHAGQDANAHPMEIDEGIEIPPEKACVLKGHDSEVFICAWNPMQD
LLASGSGDSTARIWNMENASQNEIVLKHCISRGGQEVPSNKDVTSLDWNS
KGTLLATGSYDGYARIWSTSGKLERTLGQHKGPIFALKWNKSGNYILSAG
VDRTTIIWDSQTGSAKQQFSFHSAPALDVDWQTDDSFASCSTDKCIHVCK
LDVKTPIKSFHGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKDTCVH
DLQAHSKEIYTIKWSCTGPGTANPNANLVLASASFDSTVRLWDVERGDCL
HTLTRHKEPVYSVAFSPDGKFLASGSFDKCVHIWSTQTGRLVHSYKGTGG
IFEVCWNSRGDKVGASASDGTVFVLDLRK
back to top

mRNA from alignment at scaffold112_size353035:296336..301061-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold112_size353035-snap-gene-2.44-mRNA-1 ID=maker-scaffold112_size353035-snap-gene-2.44-mRNA-1|Name=maker-scaffold112_size353035-snap-gene-2.44-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4726bp|location=Sequence derived from alignment at scaffold112_size353035:296336..301061- (Tigriopus kingsejongensis)
TGGGGCGGGTGGCGTGGGCGGCGCCGGGGCTGGCGGCCCTGTGGGCGGGC
CCGAAGGACCTCGCGGGGGAGCGGTGCGTGGCCTGGAGGGCGATGCCCGA
CACGCTGGGCAGGACGTAAGTGTGTGAACCGGGGGCCTCGGGGCGGGCGA
GGCCCGACCCTGGGGGTGAGCTGACAGTCGGGCGGGTCAGACGCGCCATG
GCACGCATGGAGTTTGTTTGTTTGGAAGGCCCTAGGCATGATCAGTACCG
AACCATCACTGCCCGGTTGGCCATCGCCGAAGAGACATAGTCGACCCCGA
GGACTTTCTGAAAAATTTATTCGAATCCTGGGACCGAGTTCAAGGTAGTC
ATGGTTGGACCCAGAAGGGACAGGACTACCTGGGGATTCCAGTCCAGGGA
TGTATTGGTGCCGTCGTGAATACTAGCCCACAGACGGCAGGTGGCAGGGC
CAACTGTCGCTAGATGACCGGGCGATGCCTCCCTCCGTCTTTCCGCATAA
GCGACAACTTTGGCCAGCCACTGGCCCTGCATTTAGCACCCATGGAGTAT
GGCCATCCGTAGAGCCCGGGCGGATTTTTACCCTAGTGCAGTGAGGGACT
GAAAGATTAAGGTCTGGCTAGCCGTTTGTTTGTTTGTTTGGCAGGCCCCG
GACATGTCTGTCCAGCTAGGCAATCTCTATTGAGACATCGTCAGCCTGGC
GTTCAAATTTGTCATGCATTGTTACCTTACCCTCGAGGCATGACCACGGG
TCCGTCCAATTTAATCCCGCCCAGGCAGCCCACCATAGCTGTGAGTGAAC
ACCACGAGTGGCCGTGAACTGAGGAGGCCCGGGATTCGAAACCCGGCCAC
TCAGCACCAGCGCAGCGCTCGCCGACACTGAGCTATGGTGGCTTCCCTTG
GTCTGGCTAGCCATGGAGTACGAGAATCACCTGGAGATCGCGCAGAACGG
AGAATGTGGCCAAAGACGTCAGATGGCACAGACAGCTCGAAAGCCGTGAA
TGTAATCCATTGACGGACTGGAGGTGCGCATGACATTTCACCCAGGACAT
TTCACCCAGGACATTTCACCCAGTTCGGTAGGGCTTCCGAGTGACTCGTG
GATGGACTCTTCAACCCTACGGAACTGGGTGAAATGTCACGCGCACCTCC
AGTCCGTCAATGGATTACATTCACGGCTTTCGAGCTGTCTGTGCCATCTG
ACGTCTTTGGCCACATTCTCCGTTCTGCGCGATCTCCAGGTGATTCTCGT
ACTCCATGGGCTAGCCGACTTTGATGTGGCTTTACATGGGAGTTCATTTA
AGGCTGCCTTCCGCTGTACGCGAATGTACGTAACTTCGAGGAGCCTTTTG
GCTATTGAGCTGATACGCCCAATCCCCCAATCGCCCAATCCAACGGGGTC
GGTGCAGCCGATTCACCGACCCAGACCGGTTTGGCGTCCCATGGCCAGTC
ACGTTGACCAACCATATTAGACACGATGGCTGGGCCTCTGAGGGTCAACA
CCTCCCACATAAGCGACGAACGCAATGTGCGGTGGGGTTTAGTAACTGCC
TCTGGGAAACCAACTCGTGAACATCCCTCGACCCGTTTGGAATCGAATGC
ATGCATCCACAGGGGGGAAGGGAGGACGTGTTATCGCACCTTCCGCTGGT
TTCGTGTTCGCGCCTTGGAGCACCCATGGTGAACACACAGGGCCCACTGA
TGTTATTAGCGCTAATTTAGCTAGTCGCCGTGCAGCCCCGTACAATCCAG
TTCCAACCACTACTTTAATTTGGGGGAAACCAGAAGGGTGTCCAGCCCTA
ATCCCGGCACTAGCTTGGCCTTCGCCTAACCAAGCCTGCCCTCGATGGTG
GCCTCTAAAAATCTGAGAACATTGGAATGGTCTAGACGGAAAGAACCCCC
TCTGGTGGGGGTCGGGCCAACTTATGATGGATCTCACCTTTTCAGTACTG
CTTAGCCGCGCGTCACTAGTATACACGTGCTCCAATTGACCATGACTAGC
TCCTGGAATTCAAGTGTATTGCCAAAAGGCCCCCAAAAAGGATCATTTCA
TCTTTGACCCCTCCACCACTCAAAAAAAGCAAGTCCCCCGCGAATAATGC
GGGCCCCGTAGACAAGCGGGGGGCTGCCCAAAAAATAAAAGGTCGGTTTT
ATTTTTCAATGCTAATGTATTTCAATATTGGTTTGAAAAAAAATCCCAAA
CTTGGATGTCAAAGATCGATCCCGTTACGATCGGGGGCTCGGGTGAAGGG
CACTCAGGCTTCATTACCCTTGAAATAATAAAGTCTCGCCTGCCTCTTAA
GGTGCCGCCGACATTAGTGTTAGGGGTCTATGGGACCTGTTCTCCGCCAG
CGAACCAAATCTCGTCTCACGCTCCACTTTCTCCCCCGCTCTGTGGATTA
GGCCAACGCTCACCCCATGGAGATTGACGAGGGCATCGAGATCCCGCCTG
AGAAGGCCTGTGTTCTCAAAGGCCACGATTCCGAGGTGTTCATCTGTGCT
TGGAACCCCATGCAAGACCTTCTCGCTTCGGGATCGGGTGATAGCACGGC
CAGGATTTGGAACATGGAAAACGCTTCCCAAAACGAGATTGTTCTCAAGC
ATTGCATCTCCCGCGGTGGTCAAGAGGTAAGCTCACCACACCAGCAGCCC
TGGGGGCTGGTGCGTCAGTCTCACAAGACCCATTTCCCTCGCTCTAAGGT
GCCCAGCAACAAGGACGTGACCTCCCTCGATTGGAACAGCAAGGGCACGC
TGCTCGCCACTGGATCCTACGATGGATACGCTCGCATTTGGTCGACCTCA
GGCAAACTGGAACGTACCCTCGGCCAGCACAAGGGTCCCATTTTCGCCCT
GAAATGGAACAAATCTGGAAACTACATACTTAGCGCTGGTGAGTGACACT
CTGCAGTCTGCACGCATCTGCGCACTGAAGTGAACGGGCGATTCATCGGC
ATGGTCCTCCATTTTTCAGGCGTGGACAGGACTACCATCATTTGGGATTC
TCAGACTGGAAGCGCTAAGCAGCAGTTTTCATTCCACTCCGCTCCAGCAT
TGGATGTGGATTGGCAAACCGACGACAGCTTTGCTTCTTGCTCGACGGAC
AAATGCATTCACGTGTGCAAATTGGACGTCAAGACTCCAATTAAATCCTT
CCACGGACACACCAATGAAGTGAGTGTTAACGAGTTTGACCGTGTCATGA
AACCCAAGGGTTGGCCTTTACCCACCTCCTGAGCATTACACATGCATGGG
GCGTTCCAATCAAAAGTAACCTTTCGCGGTCGTCCCTCTTAACAACCTCT
TTCCAAGCTTTGTTTTTCTGCTCGAAAGTCTTGATTTATCAGCCACTTTT
AGAGTGGTCTTCGGTGTCTAGTTTTGGCGGAAGTGGGATGCGTGAATCAT
GTTAACGGAAGGAAGGTCACAGCCAACGCAAATTTAAGCCAAGAAGGGCG
TCATGTTTTGTTCAAAGTATGGTCTGAGTAGTCAAAAATGGCCCTGTTGT
CAAATCAACTTGAGAAATCTCTCCCACAGGCACCTCTGACCATAGTTCTT
GGTAGCAAAAAGAACCATTTCCGTATGCAAATGGTGTTAAGAAAGAGTCG
GGACATCCTGTCTAATAGTGGTTGAGTTTATGCAAGGACCTAGCTTTAGG
CATCCCATACTTCGGCAAATTCAGATTGCCTACTAAGGTCAGGAGCGCCA
CTGATCACATGGCACATTCCCGTATAACAGATTGGTTGCATTTTGTTACA
TAGACTTTTGAACATTACCGTAGGACAACACTGACAACCCTCCTGCTTCT
TTTCAGGTTAATGCCATCAAATGGGACCCGCAAGGGAAGTTCTTGGCTTC
GTGCTCAGATGATATGACCTTAAAAGTCTGGTGCATGGACAAAGACACTT
GCGTTCACGATCTGCAAGCTCATTCAAAGGAGATCTATACGATTAAGTGG
TCATGTACAGGTGAGGCCATAATCTGAATTCACCAATGGCTTCCAGACGA
ACTCTGTGGCCCTCTTTTAACTCTGAGCTAGTCCAAATGCCCCTCAGTTA
ACCAACACAGACATCCGTTGAAGCCTCTCGCGACCTTTCACGTCTGCGAG
TGATTTTCGCTTCTTTTGACCCATTTGGTTGAATTGATCCCCTGGCCAGA
GCATTGAGTTGCTGCCATTGGCATTGTCGTCCATGAGCACAATGCTAACC
TCGTCATCTTGTTTCTCCCACAGGCCCTGGAACAGCTAATCCAAATGCCA
ATTTGGTCTTGGCCTCGGCCTCATTCGATTCCACCGTAAGATTGTGGGAC
GTTGAGAGGGGGGATTGCCTCCACACCTTGACCCGTCACAAAGAGCCGGT
TTACTCTGTGGCTTTCTCGCCCGACGGAAAGTTTCTTGCCTCCGGATCCT
TTGATAAATGTGTCCACATCTGGTCGACTCAGACTGGCAGATTGGTCCAC
AGCTACAAAGGAACGGGTGGGATCTTTGAGGTCTGTTGGAACAGCCGAGG
CGACAAGGTGGGAGCCTCGGCCTCCGATGGAACCGTCTTTGTTCTCGACC
TCCGCAAGTAACCCCCTGAGATCTCCCCTAAATGCGACCTGGAGTATTAA
GAGTTCTTGTATCAACCTCTATATCTTGGGCACGCTCTGTGCCGACCATT
TACAAGATATCAGTGCAAATATTTGTCATCCCATGATTTGAAAATCATGA
AATACAACCAAGTAAGCCAACTCTCA
back to top
Add to Basket