maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1, maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1135_size60270-snap-gene-0.12-mRNA-1
Unique Namemaker-scaffold1135_size60270-snap-gene-0.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1135_size60270supercontigscaffold1135_size60270:65..1196 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sodium potassium-transporting atpase alpha chainmaker-scaffold1135_size60270-snap-gene-0.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:exon:1128maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:exon:1128Tigriopus kingsejongensisexon
maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:exon:1129maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:exon:1129Tigriopus kingsejongensisexon
maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:cdsmaker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:cdsmaker-scaffold1135_size60270-snap-gene-0.12-mRNA-1:cds-1949415Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949416auto1949416Tigriopus kingsejongensispolypeptide
Tk10826Tk10826Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10826

>Tk10826 ID=Tk10826|Name=Tk10826|organism=Tigriopus kingsejongensis|type=polypeptide|length=256bp
MGKEKKTKDKGRLDNLKQELELDVHSVAIEELCKRFNTSLDNGLTKRQVE
ENLAKYGKNALTPPPTTPEWIKFCNNLFGGFSLLLWFGAILCFVAYSIQA
GAYEEPPDDNLYLGVVLTVVVIVTGVFSYYQESKSSKIMESFKNMVPQYA
LCLREGEKLTIKADELTLGDVIEVKFGDRVPADIRVIEARSFKVDNSSLT
GESEPQARTPEFTHENPLETKNLAFFSTNAVEGTAKGVVVNIGDNTVMGR
IAGLAS
back to top

mRNA from alignment at scaffold1135_size60270:65..1196-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1 ID=maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1|Name=maker-scaffold1135_size60270-snap-gene-0.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1132bp|location=Sequence derived from alignment at scaffold1135_size60270:65..1196- (Tigriopus kingsejongensis)
CCGGCCATATACAGGTTTTCACGTAAAAGCTACACGCTACAACCCACCCC
AAGCCGATTTATACAATAAAGGCACAAGTGGGAGATCTTCCATTTTAGAT
TGACTCTCAGTCGAGAGGGACATCTCGAATCAGTTGAAGCGCGTTCACAA
GTTCGAGAACGCCATTCAACATGGGCAAGGAAAAGAAGACCAAAGGTGAG
ATCAACTAGGCTCACCACCCAAGGATTAAGGTCACATGGCTGGAGTAGAA
ATAATTCGAATTGAGGTTTCTAGTCCGAAGGAGTGCAGGCCTTGAGCAAT
TTTAGTTCATGTGGAGAAAAGAATCCAGACGTCAGCTATGCTTGGAAATG
TATTCGAGATCTAATTCTATCCATGTTTGCCTTTTTCAGACAAGGGAAGG
TTGGACAACTTGAAACAAGAGTTGGAGCTCGATGTTCACAGCGTCGCGAT
CGAGGAGCTTTGCAAGCGCTTCAATACCAGTCTCGACAATGGTCTGACCA
AGCGCCAGGTCGAGGAGAATTTGGCCAAGTATGGCAAGAACGCCCTCACC
CCACCTCCCACCACCCCGGAGTGGATTAAGTTCTGTAACAACCTGTTCGG
TGGATTCTCCCTCCTTCTGTGGTTTGGAGCCATCCTCTGCTTCGTTGCCT
ACTCGATCCAGGCTGGTGCCTATGAGGAACCTCCAGATGATAACTTGTAC
TTGGGTGTCGTCTTGACCGTGGTTGTCATCGTGACTGGCGTCTTCTCCTA
CTACCAGGAGTCCAAGTCTTCGAAAATTATGGAATCCTTCAAGAACATGG
TCCCCCAATACGCTCTGTGCCTCCGCGAGGGCGAGAAGCTGACCATCAAG
GCCGACGAGCTCACCCTTGGGGATGTGATCGAGGTCAAATTTGGAGATCG
AGTCCCGGCAGATATTCGTGTGATCGAAGCCCGAAGTTTCAAGGTTGACA
ACTCCTCCCTCACCGGTGAATCTGAGCCGCAAGCCAGGACCCCCGAATTC
ACCCACGAGAATCCCCTGGAAACCAAGAACTTGGCCTTCTTCTCCACCAA
CGCCGTTGAGGGAACCGCTAAGGGTGTGGTCGTGAACATTGGAGACAACA
CCGTCATGGGACGTATCGCCGGATTGGCCTCA
back to top
Add to Basket