maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1, maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1
Unique Namemaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1243_size53534supercontigscaffold1243_size53534:606..8178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
plasma membrane calcium-transporting atpase 2 isoform x2maker-scaffold1243_size53534-snap-gene-0.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1404maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1404Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1405maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1405Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1406maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1406Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1407maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1407Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1408maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1408Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1409maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1409Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1410maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1410Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1411maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:exon:1411Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949422Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949423Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949424Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949426Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949427Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949428Tigriopus kingsejongensisexon
maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1243_size53534-snap-gene-0.3-mRNA-1:cds-1949429Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949430auto1949430Tigriopus kingsejongensispolypeptide
Tk04686Tk04686Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04686

>Tk04686 ID=Tk04686|Name=Tk04686|organism=Tigriopus kingsejongensis|type=polypeptide|length=858bp
MSSQYGITVKELRDLMELRGPEGVDKVKTYGGAKEICKKLKSSDSTGISG
DSGDLERRRDVFGSNTIPPKPPKTFLQLVWEALQDVTLIILELAAIISLA
LSFYKPPKEDKLDEAEEEDHPAWIEGAAILIAVTIVVLVTAFNDWSKERQ
FRGLQDRIEGEQTFSIIRGGTAVQTQIGEIVVGDVIQVKYGDLLPADGIV
IQSNDLKVDESSLTGESDHVKKGVESDPMVLSGTHVMEGSGKVLVAAVGI
NSQAGIIFALLGAVEESAAKEDKKRQKAGHDVEEGMGNSHHHNATPSKDQ
NAAGGAEELQEDMAPPPPASSGGEKSVLQAKLTNLAIQIGYAGMAVSLLT
VVILCVQFSIKKFVTEGAHWEVYYINFYVKFVIIGVTVLVVAVPEGLPLA
VTLSLAYSVKKMMADNNLVRHLDACETMGNATTICSDKTGTLTTNRMTVV
QAYLAGRHFKPDRSSLPKGKDLPEKVLSLVTQGISVNSSYSTDVEQPKNP
NELPKQIGNKTECALLGFVFDLGEDYRGIRSKHPDSSFTKVFTFNSARKS
MSTIIPLPGGGYRVYTKGASEIILKKCSFTLVDGGRVDRFSSSEQDRCVR
EIIEPMARDGLRTISLAYRDFVPGKAEPNQSRYDSEPDWDDEDAVISNLT
SICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIASKCGII
KPGDGFLVIEGKEFNQLIKNSKDEVDQAKLDQIWPKLRVLARSQPIDKYN
LVKGIINSKATANREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEA
SDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGAC
VIQDSPLK
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mRNA from alignment at scaffold1243_size53534:606..8178-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1 ID=maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1|Name=maker-scaffold1243_size53534-snap-gene-0.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7573bp|location=Sequence derived from alignment at scaffold1243_size53534:606..8178- (Tigriopus kingsejongensis)
AGGTTAGTCCGAAACTAGGCCACGTCATTAGTGGGACACTCGCATCCCGG
CCAGGGACTCTGCCCACAATCGGCAGCCCCCCCTCCCCCCCCCAACCCGT
GAGGCTGTGTTTCGGAGAGAAAAGTGCCCACCATCGGATTGTTATACCCG
ACTCTTAAGCCCTCAGAAGGCTCACCCGCAGCATGTCCTCGCAATATGGG
ATCACGGTCAAGGAGCTCCGCGACCTCATGGAGCTCCGGGGACCCGAGGG
CGTGGACAAGGTCAAGACTTACGGAGGCGCCAAAGAAATCTGCAAGAAAC
TCAAATCATCCGACTCCACGGGTAAGTCCACGGGGATTTGCTCATCCTGA
TCACTGGTCCTGAGCACCTAGAGTTGTCCGAATCCATCCGGCCAGACAGT
TGATGGCCGTTTAGTTTTACGAGTACTGCAGTGAAGTCATTTCCCTTACG
CCAGCTTGCCAAATCTACAAAAAGAGGACTTTTAGCTCCTAATTCGCCAG
ATGGTCTCTGGGATTGGATGGGGGAGAGCAAAATTGGGTCCGGGCGTTTT
GACACTGGTCTCGGCCTTTTTTAGCCCACGATTAGCTTCATAAAATGTGT
CTTATTCTTGCCTCGTCCCAGGAACAAATACTTTGGATCGATTTATCTTG
GGTTCATATCACATTTTAGTGCATAGCCAATTCGATCTCTGAACTAGTTA
CTCTTACCAAAGCCTCTCCGAAATGGCGATGGTAAATCCTGGAAGCAACC
TGATTTTACTAGCCTGTTGAGAGATGGCATTTAACTGGTTCATTCAGAGA
TCAACATAAATTGATCATTGATGAACGATCTGCGAGTGCCTCAGTCGGAG
GACAATTTAGTTTTTTTAACATATATCATCGCCCTCAGTGCCATCTCCTT
TCTTCAGGGCTCCCATATCACAATTAGGGCGTAAATAGGTCGTTTTTGAA
CTGATGTAGGGACTGATTATCACAAACAGATGGAAAACGTTGACCAGTGT
TCATGGGATTATACATACGTATGTGAGCCACCAGTTTTGAGTATTCTCCC
CCACTCCGAAGCTCCATTGCATAATTTTGTAGGATGCGAACCTGCATACA
AGCCATTCATGAGACCTTGGACGAGGAGTCACATGGCTACAATGTAAATA
AACAAATGTTTAGCTCCATGGATGAGGGATGTACTCTAGAGTATTTTTTC
CTTGAGAAAATGAGCTCGAAACCGGCTTTTGGGCGTACGATGGCTCCTCG
AGATTGACGAATGACTTGTCACGTTTTTGAAACAATCTGGGCTTCGCCTT
CTAGGTATCAGTGGCGATTCGGGCGACCTGGAGAGGCGCCGAGATGTGTT
CGGCTCTAATACAATCCCACCGAAGCCTCCGAAGACCTTTCTCCAATTAG
TCTGGGAAGCGCTCCAAGACGTGACCCTGATCATTCTCGAATTGGCTGCC
ATCATCTCATTGGCTCTTTCATTCTACAAACCTCCCAAGGAGGACAAATT
GGGTAAGCATGGAGAGACCGGCGAATTGCTCCCGGCCGGACATTTCACAC
CATGGGGTGAGGTGGCAATCAATAATGGGCTTGTTATTTTCTAATCTATG
AACATCAGATGACAGTAAGTTTTCCCCGGTGAAGAATGTACCCTAAAAAC
TGAAGCCATGCGCACTGCACACTTGGTTGTGCACTAATAAACACCAAATG
TGCCAAACCCTAGTCTCGAACGGACGAGAGTTGAACGTCCAACCCCCATG
TTTAATATCCCACCTTCAGTGCATGCATATATACGTAGTATGATACAATC
ATGTACTTAGTATCATACAGTATATCGTTTCTGTACAACCTTTGACAGCC
ACATAGGAGTTAGAGTCCAGCTCCTAGAGCCTCCAACCGCTCACTTTAAG
CCTCCTGGTGTTTTCACGCTCTGCGGATCAATTATTCCAGATGAGGCCGA
GGAGGAAGACCATCCGGCCTGGATTGAAGGAGCGGCCATTCTTATCGCCG
TGACCATTGTGGTGCTCGTCACGGCCTTCAACGATTGGTCCAAGGAGCGC
CAATTCCGCGGACTCCAAGACCGCATCGAGGGCGAGCAGACCTTCAGTAT
CATCCGAGGAGGGACGGCCGTTCAAACTCAGATTGGCGAGATCGTCGTGG
GAGACGTGATTCAGGTAGGCTGCTTTTTTCACCATTCCCTCCAGTGATGA
TTAGTGAGATATGGAAAACCGGTTGGGCTAAAGGTAGAATTGAGAGCTGC
TTTTTCAGAAGTCTGGAGTTGCTCTTGGGACCAAGCAACAAAAAAAGCAA
CGACGAAATGTGTTTTGTGATTTTTTATGGTTTTTTGCTGACATTTCGCA
GAATATTTTTCTGTCATTGAGGACCTTGCAATTTCCTTGGCGACGCTAAA
AAGAAAAGCTTGACTTAAGAATGAGTGAGAAGTGGTCCCAGACCAACCAA
AAATTCAGGGCAGTTCTACAGACAAATGTGTGTTTTTTAATAAAATTCTG
AGTGATCCTAAAAAATGACATTTCTGTTCTCAAGTTTTGGGCTCAGTATT
GAAATCACGGCTCAAACGGATTTCAGGGCATCTCAACTTGTCGCAGTGTA
GTCGTACTCGTAGACATTTACTAAGTAAACAATGTCCGGAAACATGCGCT
AGTCAATTGTGTTAGGGTATTGTTTAAAATTACTGAGCAGAACTTAAAAT
TTGACAAAGACAACAAGAACACAGTTAACCGATACACAGAACTATGCAAT
ACTGCAACAAAATAAGAACAGAATTCACAGGAGTGGCTTGAAAACGAAGA
GCTGAAATGAAAGCCATTCCCAAGATATGTGGTAACATCAAAACGCTAAT
TATCATTAATCCAAAACTACTCCGTATAATGGCGATTTTTTGGTGTATTT
ACTTTGTTTTTCCTAAAATTGGCATAATTGAGAAGGTTCTGGAAAAAGCA
AAATTCATTTGTAAAAACAGCAGATTTTAGTATTATTGGCCCACTGGGAC
AAAAACGCCAAGAAAAGGAAAAAAGCAAAGGACCAAAATCCCAAAAGTGG
CAAAAAGATCTTTGTTTATTGTTTTGGACCGAGTGCGATCTTGGAACACT
GATTTGAGACCAGATTTGGTATCATAATGACCTCTGTGGGATCTGGCAAC
ACTGATTTGAGACCAGATTTGGTATCATAATGACCTCTGTGGGATCTGGC
AACACTGCTTATTCAACAACATCCCTGAAATAAATATAAATCATGTAAAA
CATCTAGAAACATAACAAAGAGAGCTCAAAGGCAGGGTTATAAAAGTGCC
ATGAACCGCTCGAAATCTGTGATGCATCGAGACTGAACTATTATTCGGAT
TTATAGGTGAAATATGGCGATCTCTTGCCCGCCGATGGCATAGTCATCCA
GAGCAATGATCTCAAAGTGGACGAATCCTCCCTCACGGGCGAGTCGGACC
ACGTCAAGAAGGGCGTGGAGTCCGACCCCATGGTGCTCTCCGGTACCCAC
GTCATGGAGGGGAGTGGCAAAGTCTTGGTGGCGGCTGTGGGCATCAACTC
CCAGGCCGGCATCATCTTCGCCCTCCTTGGAGCCGTGGAGGAGAGTGCGG
CCAAGGAGGACAAGAAGCGGCAGAAAGCAGGTAAGAAATCGCTCTCCCTT
TAACTTCCTGTTCGTTGACATTTCGGTCAAAGTGCGTGCGTGATTCCCGC
GTGAGATGAGTGCTTGGCGATGATACTAACGAGACTAGGGATCGGAAAAA
AGGTCGTGCATTTTCCATGCCTGCCATCAATATGCCAATTTTGCAAAATT
ATTAAAACGAAGGTTTACAGGCATTCCTGTTTTTCTTCGTGACACAAAAA
AGATTTTTTTCTTTAAAAAACAACAACTAAACGCAATTATTAATTTATCC
GAGACCCCCAAAACCCGCACGCTTTGATGTTTTTTTTTTCGATCCCTACT
AATGCTCATCGGGCTGCTTTGACTGGGAGTGTCTTCGAATTTCTCTCGTC
TCCACCCTCATGTAGAACCTCCCCCCTCCCCTTTCAACCTAGTGGTGGGC
TGGACCCCGCGGGGTTCCGTGGCCAGACCCATAGAGTATTATTTCGTAGC
CCACGCCCATGGTGTTTCCATGGCTAATAGCGATCACTCTTCGTGAATGT
GAATCCTCCCGGGTTTTTTCGTATTCCATGGCTGCATCCGAATCGTACAC
AATTCAAGTAGTTTTCGCTCTCCTCTCGCTCTCTCTCTCCCTCATACTTT
ATATCTGAGGCCTGATTTGATTTCCCATCAAGATTCGTAGCCATTGGGAA
TACAAATTCGTCCGTCGATCTGCACGTTAGCGTACAATGGATTCCTCCCT
CATAATTTATTCCAACCTTCAACAATTTCCATCCCGGGCTAATCTTACAG
AGAGGAAGAACAGAAAGCACCAGAGTCAGAAGTCCACCAATAAGGACGAG
GAGGCTGCGGCCATGAACGTGCCCGCTGCAGCCTCCACGGGCGAGAGTGC
GGCGGCCACCCGTGGAACAGGTGATTTATGTCAAGAAACTCGCTGTCCTT
GGGTGTTTCCTACTACTACTACTGTCACTCGCTCTTGCTGTGCACTATTG
CTCCCTCTCCATCCATGCATACACCAGTGTGTACAATGTGTGCAGTACTC
TCTGCTCTGGGCATCGCTGTGGAATGTGGATGGAGAGGCTATCGTGGGGA
TGGTGGTTTCCGGGTCGGTCCCAACTCGACACTTGTGTTCTTCAAGGGTC
CTTCCATGGTTCATGTGTCCTTCTCCGTAGTGCTGTTCTTTCCCTAGATG
ATGACACTTTTCATTGGTTTCCCACCCTTACATTATACTACTAACACCCC
CTCCTCCTCTTCTCTATGGTTGTTCTCTACTACTGTGGACCCCACACTGA
ATGGTGCAACTCAATGGTGCAACTCAATGGTTGAATGTATGGCCAGGTTC
GGATCCAGCCCAGTGCTCACGAACGCCTCTCCCATCTTCCAGGTCACGAC
GTCGAGGAGGGCATGGGCAACTCCCACCACCACAACGCCACGCCCTCCAA
GGACCAGAACGCCGCGGGTGGGGCCGAGGAGCTCCAAGAAGATATGGCCC
CGCCACCGCCCGCCTCCTCCGGGGGCGAGAAGTCCGTGCTGCAGGCCAAG
CTCACCAATCTGGCCATTCAGATTGGATATGCGGGCATGGCTGTGTCTCT
CCTGACCGTGGTCATCCTCTGCGTCCAGTTCTCGATCAAGAAGTTCGTCA
CGGAGGGCGCCCACTGGGAGGTCTACTATATCAACTTCTACGTCAAGTTT
GTTATCATCGGAGTCACTGTCCTCGTCGTGGCCGTGCCTGAAGGTCTTCC
TCTAGCTGTTACTCTCTCATTGGCGTACTCTGTCAAGGTAAGCAATGCAA
GCGGGGTCCACTTTCCGTCTCACTTTGAAGTGTGAGGCACACGAAAAAAT
GGGCCAGATTGCCCACTCGTTGAATTTGCCGAGCTAAGCGCTCGTCTATT
TCCCCTTAATTTTCGGAATAGAAAATGTCGGAGAAAGTTTCTTCTTATTT
CTTCTTGCTCGAGATGAGTGTATTTCGCATTCACTTCAGAGGGAGAATGA
TTGCTTTTCTAAGAAGAGTGCTCCCGAAATAGAATGCACGTTGATGAAGA
ATTCATCTTTTTTTAAATCAAGTTAGCCGGCTTATTTGAAGCCAAGATGG
TTGACTCGAGTCGACTGTCACATTCGGCGGGCTAAGTCGGATGTCATCGG
GATCGTTGGAATACTAACAGAATGCTGTCCTGGTTTCAGAAAATGATGGC
GGATAATAACTTGGTGCGGCACTTGGACGCTTGCGAGACCATGGGCAATG
CCACCACGATCTGCTCGGACAAGACGGGCACTCTGACCACCAACCGGATG
ACTGTGGTCCAGGCCTATCTGGCTGGGCGCCACTTCAAGCCCGACCGATC
CTCACTGCCCAAGGGCAAGGACCTGCCCGAGAAAGTGCTGAGCCTGGTGA
CCCAAGGGATCAGCGTGAACAGCTCCTACTCGACGGACGTGGAGCAGCCC
AAGAACCCCAATGAGCTGCCCAAACAGATCGGCAACAAAACCGAGTGCGC
CCTCCTGGGCTTCGTCTTCGACCTGGGCGAGGACTACCGGGGCATCCGGT
CCAAACATCCCGATTCTTCCTTCACCAAAGTGTTCACTTTCAACTCGGCC
CGCAAGAGTATGAGTACCATCATCCCCCTGCCCGGGGGCGGGTACCGGGT
CTACACGAAAGGTGCCAGTGAGATCATCCTGAAAAAGTGTTCCTTCACCC
TGGTCGATGGCGGACGGGTGGATCGATTCTCCTCGTCGGAACAAGACCGC
TGTGTGCGCGAAATTATCGAGCCCATGGCCCGGGACGGGCTCAGGACAAT
CAGTCTCGCCTACAGGGACTTCGTGCCCGGCAAGGCCGAGCCCAACCAGT
CTCGCTACGACTCCGAGCCGGACTGGGACGACGAGGACGCGGTGATCAGC
AATCTCACCTCCATCTGTGTGGTGGGCATTGAGGACCCAGTGAGGCCCGA
GGTCCCGGAGGCCATTCGCAAGTGCCAGCGAGCGGGAATCACAGTGCGCA
TGGTCACGGGCGACAATATCAACACGGCTCGGGCCATTGCCTCCAAGTGC
GGCATTATCAAGCCCGGCGACGGCTTCCTCGTCATCGAGGGCAAGGAGTT
CAACCAGCTCATCAAGAACTCGAAGGATGAGGTAGACCTAATTGTACCCC
CTGATCTGAAGTAGCCGCAAATCCCTCCTAACATACGCTCCATCCTCTTG
CTCTCTCACCCATATCGTTTAGGTGGACCAAGCCAAATTGGACCAAATTT
GGCCCAAGCTGCGCGTCTTGGCCCGCTCTCAGCCCATCGACAAGTATAAT
TTGGTCAAGGGGATCATCAACAGTAAGGCCACTGCCAATCGCGAGGTGGT
GGCCGTCACCGGCGACGGCACCAACGATGGGCCCGCCTTGAAGAAAGCCG
ATGTCGGATTTGCTATGGTAATGAACCGTGTAGTCCGAGGGGGTTATCCC
TGAAATTGTGCCAAATCTCCTCCCTGCTTTTGATACGTGGAAACGCGGAA
AGTCATGTCCCATCCATCCACCCTTTGGGTCGGAATGTATTTCGGGTGAC
AACTGACGTCAGCCTCTCAGAAGGAGCGATTATCATGTTTTTGACCTCCT
CGGAGGTTGTTTACCCAAGGTACACTTCCGAGGCTTGGAAAATGATCTGA
GCACGTAATGGACATGAGAAAACAGAGGTCCATCCTTCCCGAGAAGTCGG
CCTTTCTTGGCGGGGGAGGACTTTTTTTACCAATTTCACCCATCTCTCTC
TCTCTCTCTCTTCCAGGGAATTGCGGGTACGGACGTTGCGAAAGAGGCGT
CCGATATCATTCTCACCGACGACAACTTCAGCAGTATTGTGAAGGCTGTC
ATGTGGGGAAGAAATGTCTATGATAGCATTGCCAAATTTCTCCAGTTTCA
ACTGACTGTCAACGTCGTGGCCGTCATAGTGGCCTTTATTGGTGCTTGCG
TCATCCAGGACTCGCCCCTGAAG
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