maker-scaffold125_size330479-snap-gene-0.15-mRNA-1, maker-scaffold125_size330479-snap-gene-0.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold125_size330479-snap-gene-0.15-mRNA-1
Unique Namemaker-scaffold125_size330479-snap-gene-0.15-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold125_size330479supercontigscaffold125_size330479:257..3502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
mrna export factormaker-scaffold125_size330479-snap-gene-0.15Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:443maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:443Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:444maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:444Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:445maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:445Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:446maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:446Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:447maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:exon:447Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:three_prime_utrmaker-scaffold125_size330479-snap-gene-0.15-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:three_prime_utrmaker-scaffold125_size330479-snap-gene-0.15-mRNA-1:three_prime_utr-1950439Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cdsmaker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cdsmaker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cds-1950441Tigriopus kingsejongensisexon
maker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cdsmaker-scaffold125_size330479-snap-gene-0.15-mRNA-1:cds-1950442Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1950443auto1950443Tigriopus kingsejongensispolypeptide
Tk06887Tk06887Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06887

>Tk06887 ID=Tk06887|Name=Tk06887|organism=Tigriopus kingsejongensis|type=polypeptide|length=376bp
LIRRREKARIAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDD
SVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPIL
DVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPN
YTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGR
GIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRV
AIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVG
SDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGH
EFHNPQKKNYIYLRSCFDELKPRAKP
back to top

mRNA from alignment at scaffold125_size330479:257..3502-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold125_size330479-snap-gene-0.15-mRNA-1 ID=maker-scaffold125_size330479-snap-gene-0.15-mRNA-1|Name=maker-scaffold125_size330479-snap-gene-0.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3246bp|location=Sequence derived from alignment at scaffold125_size330479:257..3502- (Tigriopus kingsejongensis)
GCCTGCCAGCCGGGCTGACCAGTCTTGAGCGGGCTGAAAGGGCATCGACG
TAAACAAACCGAACGAGGACGAAGCCGAGCTTGATCCGGAGGAGGGAAAA
GGCGCGAATTGCAATGTTCGGCACGAGTTCAGCCTTCGGCGGGGGCAACC
AGCCCGCCGGCTTCGGGGTGGGTCAACCCACGTCGACCAATCCCAACAAG
GACATCGAAGTCAACTCGGCGCCCGACGACTCGGTCTCCTGCTTGAGCTT
CTCCCCGCCCTCCTTGCCCAACACGTTCCTCATCGCCGGCTCTTGGGACA
ACAACGTGCGATGCTGGGAGATCCAGGGCAACGGCCAGTCCGAGCCCAAG
ACGCAACAGAGCATGCAGGTAGGACGCGGCCGCCGAGGCAGCCGCCCAGC
TAGCCCAGGCAGCCGCCCGGCTCGGCCCGGCTCCGGATCTAATGCGGGTG
GGCATTTTCTAGGGTCCCATCCTGGACGTGTGTTGGCATGACGACGGCAC
CAAAGTGTTCATGGCCTCATGCGATAAGCAAGTCAAGTGCTGGGACTTGG
CCTCCAATCAAACCATGAAAGTGGCCGAACACGCCGCCCCCGTCAAGTCG
GTGCGATGGGTCAAAGCGCCCAACTACACAGCCCTCATGACGGGCTCGTG
GGACAAGACGCTCAAATTCTGGGACACCCGCTCGCCCAACCCCATCATGA
GCATCGACCTGGGCGAACGCTGCTACTGCGCCGACCTCGAATATCCCATG
GCCGTGGTGGGCACGGCCGGACGGGGCATCATCATTTATCAATTGGAGGG
CCAGCCCAAGGAATTCAAGCGCATCGAACCGCCTCTCAAATACCAGCACC
GGTGCATCTCAGTATTCAAGGACAAGAAGGGTCAGCCCACCGGTGAGTGG
CTCGGCTCATGTTTGGGCACCCGGGCGCTGTCGGTTCAACTTAATCAATC
CATCTCATTCCGACAGGCTTCGCCTTGGGCAGTGTGGAGGGCCGTGTGGC
CATTCAGTATGCGAATGCCACCAACCCGAAAGACAACTTCACGTTCAAGT
GTCACCGCTCCAATGGGGTGAACAACGGTTTCCAAGACATTTACGCCGTG
AACGATATTGCTTTCCACCCGCAACACGGCACGCTGGCCACGGTGGGCTC
TGATGGTCGCTTCTCATTTTGGGACAAGGTATGTTTTCCGAGAGCTCGAC
CTTCGAGACGCGAACTTTTTACACCATGGCCTTTTGCAGGATGCTCGCAC
CAAGCTGAAGACGTCCGAAGCCATGGATCAGCCCATCACCGCCTGTTCGT
TTAGTAGCAACGGTCACATTTTTGCCTACTCGGCCAGCTACGACTGGTCT
CGAGGCCACGAGTTCCACAACCCTCAGAAGAAGAACTACATCTATCTCCG
GTCCTGCTTTGACGAGCTCAAACCCCGGGCCAAGCCCTAAGACACAATCA
AGACGAAATGGGTTCGGAAACGGATTTGTTTTGCGATGGGTGGACACCTG
TATAGTGGCGCACCGCTTCCTCAAACCCGACTAAAAATACAGATTCAGAC
TACTGATGGGCGGTGGATGCATTAGATCTTGTGCAGGGTGCGGGTCTCGG
TGGTCCTTTGGGCGGCTAGGAAATTGGCTTTCTTAAACTTGGGGTGAGGC
ACGGTGTGGGTCTTTTTGACATACTGAGCCACCTCTTGCTGGACGAGCCA
GGATTTAACCTGATAGTCTTGGAACTCGCGCTCAGTGTGTTTAACGTAGC
GGGTGGCGTTGGTGGGCACATGGGCCGATTTGATCACCTTGTGGATTACT
TTATCTTCGGACAGGGTGCGGGAGATCACAAAAAGGAGTCCTTGGGGTTT
CAAGTAGTTTTCGGCCACCACGCGCAATCCATACTCGAGTTCGTGGAGCT
CGTCATTCACAAAGGCCCGGAGCGCTATGAGCGTCTGATGAACCATCCGA
AGCAGCAAGTCCTCGGGATCTTGGGCCGTTTTCTCGGCCACCTGGCGCGC
CGTGGGCGTCAGAATTTCGTACAACTCCTGAAAGATCACATCAGACTCTC
AAGTCTCACGCGGACGCCTCGGACCAGTCCCTTAGACCTACCTCGACCGA
TTTGAAGGTGTGAAACAAATAGCGCGCTTCAACCATGGCACTGGCCACAT
GTTTGGCGGTCTGACTGACCCCGCCGTAGTACTTGATGATCTTGGTCAGT
TGTCGCTCATCGAGTCTTTGCAGCACTTCCGATCCGGTGGGCCGCTGGGG
AAAACGGTCTGGATCCAAGCGCAGGTCCAGGCGCCCAGCCTCACGGCTCC
AAGCGAAGCCCCGCAACGGGTCTTGGAGCTGGCGTTCTGAGCAACCCGTG
TCTAAGAGGACCACATCGAAAGAACCCGGCGCCCAGCCGTGGGCCTGCAG
CTGGCCGGGCAACTCCGAGATGCGGGCTTGCAGCGGCAGCACGTCCGACC
GGGCGACAGCCGCTTGATAGGCCTGGGCGTCACAATCAGAGGCCACGAGC
CGGGCCCCCGGATCTCGGTCCAACAGGAGCTGGCTGTGGCCGCCGTCACC
AAATGTCATATCTAAATAGTTGAGTCCCGTCCCCCGATCTCGCAGATGAA
AAAGGATCTCGGGGGCAAAGGCGACCGTCCCGGCCGATCCGGAGGCCGGC
TCGAGCGCAGGGCTGTGCGGGCCACGCAGAGTCGCCAGGCGCCGTGCCAG
GCAACGGGGGGCCCACATCCTTTAGCGGAGGCGGATCCGCTGCCACCACC
AGAGACCCTGGATATGGCGGTCCAACTCCTCGATAACCCCGGGCGATGTC
ACTCGGTCCAGCTCCTCGCGGTTGAGTCGACTGAGTGAGACCTCGGGGTA
GAGGCGCGGATGAGCCCGTTGGTGGGCGCTCTCGGCCAGGCGTTGGTAGT
CACCGAGTTGGCGGGCCACCGAGTCCGAGACGGGGGCACTGTTTTCCCCT
TGCGGAAAGCTCTGTTGAACCAGTCGCCGCAGATACGGGCCCAAATCGCT
GAAAGACGACCGGCATCATGAAACCCGCGTCCAGCACTCCGGAGTGCCCG
AACTAATTTCGGGGGCGACTCGGCTGCAATACCCTGGGACCCACTCACAG
TCCTTCTTTAAGGGGCGACTTGGGCCACTGGGCCACCACGGCCAGGGCTT
GGGCGTAAGTGCGCACGGTCAGTGGGCGCGCCATGCATGGAGTCGATCGA
GTTCGGTGCCACTCACGTAGTCATCCGCCTGGCACGTGACAGTGTT
back to top
Add to Basket