maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1, maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1
Unique Namemaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1343_size46188supercontigscaffold1343_size46188:26443..29791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
4-aminobutyrate mitochondrialmaker-scaffold1343_size46188-snap-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:595maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:595Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:596maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:596Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:597maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:597Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:598maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:598Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:599maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:599Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:600maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:600Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:601maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:601Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:602maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:exon:602Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:three_prime_utrmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cds-1968940Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cds-1968941Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cds-1968942Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cds-1968943Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:cds-1968944Tigriopus kingsejongensisexon
maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1343_size46188-snap-gene-0.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1968946auto1968946Tigriopus kingsejongensispolypeptide
Tk02720Tk02720Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02720

>Tk02720 ID=Tk02720|Name=Tk02720|organism=Tigriopus kingsejongensis|type=polypeptide|length=484bp
MIPIKTLKLMTRPIFVASRTLVSGEPAGPSLKTEIPGPQSLKLLEDLDKV
QAMKSVQFFADYDKSIGNFLIDADDNVVLDVFTSISSLPLGYNHPNMLKA
FDSDHAKRVLVNRPALGVYPGNDWVQQLRNVLLSCAPPGLDQVITMMCGS
CSNENAFKLMYYKFMEKERGGRALNDEEMKSCMVNQAPGTPQLSVLSFHG
GFHGRTPGALSCTHSKYIHKVDVPLYDWPVADFPRYKYPLEENTSVNDAE
DKRCLAQVEEILEKQTKIGNPCAGLIVEPIQSEGGDHHGSSAWFQGLQDI
CQKHDIVYLMDEVQTGGGPTGKMWAHEYFNLREAPDVVTFSKKMLTGGFY
YKPDLRPKQAYQIFNTWVGDPSKLILLDSVLKTIRQDKLLDVALKSGDVL
LTGLRRLEHKFPGMIHSARGIGTFCAVDADTSARRDQILAKLRSVGVHCG
GCGDTAIRLRPALIFQPKHAEMFIEKLEGVLKSF
back to top

mRNA from alignment at scaffold1343_size46188:26443..29791-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1 ID=maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1|Name=maker-scaffold1343_size46188-snap-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3349bp|location=Sequence derived from alignment at scaffold1343_size46188:26443..29791- (Tigriopus kingsejongensis)
ATTTTCTGAGGCACACAAACACACACAAAACCTGGCTGCTGAGTGAGGCC
TTGGACAATATGAGATTGGGGAAACTTGGATGACACCAGTCCCATTGGCC
GATGCTCTGGACGTATTAGAGATATTTCAAACACCAAAGTGGTGCGTTCC
TCTCGAAAGAGTGTATTCCTCCATAGTGAACTCGAAGTGGTTTGACAACT
TTTTTTCAGTTCATGCCCAATTGCAACGGACTCTGTGTGTACTAGTTGAG
TGGAGTTTCGATCACTGAGCGAAGCACTTCCCAATCTTCTCCATCATGAT
TCCGATCAAGACGTTAAAGTTGATGACCCGCCCAATCTTTGTGGCCTCCC
GAACCTTGGTGTCGGGGGAGCCCGCCGGGCCCAGCCTCAAGACCGAGATC
CCCGGGCCTCAATCGCTGAAGCTTCTCGAAGACCTGGATAAGGTCCAAGC
CATGAAGTCAGTTCAATTCTTTGCCGATTATGACAAGAGCATCGGCAACT
TCCTGATCGACGCCGATGACAATGTGGTGCTCGATGTCTTCACTAGCATT
TCCTCCCTTCCATTGGGTAAGCCCTTCCACCCATCCCAATCTGCCTCGGA
TTGACTTGGATCCATGCTTTTAGGCTATAACCATCCCAACATGTTGAAGG
CTTTCGACTCTGATCACGCCAAGCGAGTCCTCGTCAATCGACCAGCTTTG
GGAGTCTATCCAGGCAACGATTGGGTGCAACAACTGAGGAACGTCCTGTT
GTCGTGTGCTCCTCCGGGTCTGGATCAGGTATCCCGTTCAAATGTCCTAC
CTTGAAGTTCAGCCTTTGACGGCTATCCGTGTTTCAGGTCATCACCATGA
TGTGCGGATCTTGCTCCAACGAGAATGCTTTCAAACTCATGTACTACAAG
TTCATGGAAAAGGAGAGGGGAGGCAGAGCCCTTAACGATGAGGAGATGAA
GTCCTGCATGGTCAACCAAGCCCCTGGCACGCCTCAACTCTCGGTACTTT
CCTTCCATGGCGGCTTTCATGGGCGCACTCCGGGCGCACTTTCGTGCACC
CACTCCAAATATATTCACAAGGTGGATGTTCCCCTCTATGACTGGCCCGT
GGCGGACTTCCCTAGATACAAGTGGGTTATTCCAAGCTATGCAATTCCTA
TGTGGTCCAGAATGCACTTATGAATGTTCCAGGTATCCCTTGGAGGAGAA
CACCAGTGTCAATGACGCCGAAGATAAGCGCTGCCTGGCTCAAGTCGAGG
AAATTCTAGAGAAACAGACAAAGATTGGCAATCCCTGCGCCGGGCTCATC
GTAGAACCCATTCAATCCGAGGGTGGAGATCACCACGGCAGTTCTGCTTG
GTTCCAGGTATGGATTTGACTCTTCAAGCCCAGCTATCTGTGCTAAAACA
AAGGAGGTGTAGGGGCATGATAATTATTGGTTCCTCGCTTAGGGCCTCCA
AGACATTTGCCAGAAGCACGATATTGTCTACCTCATGGACGAGGTCCAGA
CTGGAGGTGGTCCCACTGGCAAGATGTGGGCTCACGAATACTTCAATCTT
CGCGAGGCTCCAGATGTGGTGACCTTCAGCAAGAAGATGTTGACCGGAGG
CTTCTACTATAAGCCCGACCTTCGCCCCAAGCAAGCCTACCAGATTTTTA
ACACCTGGGTTGGCGATCCAAGTGGGTGAAAAAGTGGGACCAGGTTCTAC
GGATCGATGATCATGGTCTGTTTCTGTTATATAGGCAAGCTGATCCTCTT
GGACTCTGTCTTGAAGACCATTCGCCAGGACAAGCTCTTGGATGTCGCTT
TGAAGTCTGGAGACGTTCTGCTCACCGGCCTTCGGCGATTGGAACACAAG
TTCCCGGGCATGATCCACTCTGCTCGTGGCATTGGAACCTTCTGTGCAGT
TGACGCTGACACTTCGGCCAGGTAAGCGCTAGATTTGGCGCCGAAAACTC
ACGCAACCTTCAAACTGGTGGGTGGGCTGAATGTCGCCGAATCTGGGTAA
AGTGGATGTCATGTTGTGACATCGAACTGCGGAGCACGGCATGGGCTTTG
TTTGAATCTCCCTTGGGAGTCTCCACTCTTTCAACCCCATTTATTTGCCA
TCATAAATCTTGGTCCTCGTTACCCCAACTCAGTTCGCCCACTCTCAATT
GCAATTGTTTCAGTTTTACACTGAAATTATTGTCCCACATAGCTCCGAGT
AAAACCCCATGTCTGGGTTTCAGTATGGGTAAAAAATGGGCCTTTTTGAC
CATTAACCAGTCTGAGGATGAGTGGCAATTAGATTACGTACACCCGGCCT
AAGTGTTTTTCGCAGTGCTCGGAGTGTGCTCCACATTTTGGGGACCAACA
ATCATTAGTTTGCCTCCTTGGCATTGTGTATCAAGTGGAACTGGACAAGA
GCAAAAAAGCAGACGGAGAGAAACTCGAGATATTCATCAAGTCCTCCCCA
ACTATTTATCGTGGCTCTCAACAAAACCAGTTTTTTGTTCCTCACACCCC
TTTTTGCTCTCATCTTCTTAGACGCGATCAAATCCTAGCAAAGCTGAGGA
GCGTGGGCGTTCACTGTGGAGGGTGTGGAGACACCGCCATCCGGCTCCGC
CCTGCCTTGATCTTCCAGCCAAAGCACGCAGAGATGTTCATCGAGAAGCT
CGAGGGAGTCCTCAAGAGCTTCTGAGCCTTGGTATCTTCCACATAATGTA
ACTCTAGCAATGGAATGCTCTCAATGGAATACGCAACCCTCATGTACTAC
AGTACAATTTGATATTAGCCCCAAGGTCAAACAGGCGGGTGGATGGATGA
TAATTTTGTTTTTGTATTGCTCCTCTAAATTGGCATGTGTCTTCGGCATG
GAATATACGCAAAACGTGGAATCACCATCACGAGTCATATTTAGTTCATC
AGCATCGAGTCCGGAACACACACTGGTAAAATTGATGCCGCCAACCGGTT
CAGATCGGTTTTGGGCGCTAGTCACAACAATGGGTTTCGTAGATAACAAC
AATCGACTTACATTTCTGATTGAAAAACCAAAACTCAACATCTGCAATCG
GGCAATTCGTATAGCGTGCTCCTAAATCTACTTATAACGCACGACTTGAT
TAATATCAATGGGCTTCGACGATCCTCGGCTATCATTCCGCATGCTCGAT
CACTGTCACTGCAACCCACATCACAATCACGCTCAAGTTCACCATCTTGA
ATCATCGGCGTCGTGTCCTTTATCGCTTGGACATGGAAGAGAGTTTGTTC
AGCAAAGGGTCCTCGAATCGAGTCTGCTTGGAGCGGGATCGCTGTTGCGA
GGTCCTCCGGCCCGACCTCCGCGTGTATGATCGACTCCGCGGCTTGGGG
back to top
Add to Basket