maker-scaffold135_size322082-snap-gene-2.12-mRNA-1, maker-scaffold135_size322082-snap-gene-2.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold135_size322082-snap-gene-2.12-mRNA-1
Unique Namemaker-scaffold135_size322082-snap-gene-2.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold135_size322082supercontigscaffold135_size322082:277346..280929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ap-2 complex subunit betamaker-scaffold135_size322082-snap-gene-2.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:776maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:776Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:777maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:777Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:778maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:778Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:779maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:779Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:780maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:780Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:781maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:781Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:782maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:exon:782Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:five_prime_utrmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cds-2014870Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cds-2014871Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cds-2014872Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cds-2014873Tigriopus kingsejongensisexon
maker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cdsmaker-scaffold135_size322082-snap-gene-2.12-mRNA-1:cds-2014874Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2014875auto2014875Tigriopus kingsejongensispolypeptide
Tk07970Tk07970Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07970

>Tk07970 ID=Tk07970|Name=Tk07970|organism=Tigriopus kingsejongensis|type=polypeptide|length=918bp
MTDSKYFTTTKKGEIFELKSELNSDKKEKKREAVKKVIASMTVGKDVSAL
FPDVANCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDANP
LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVSVAKLHD
INAALVEEQGFLDSLKDLLSDSNPMVVANAVAALSEINEASPSGRPLIQM
NAQTINKLLTALNECTEWGQVFILDSLANYTPKDEREAQSICERITPRLA
HANAAVVLSAVKVLMKYLEMMGPETEFVAGLSKKLAPPLVTLLSSEPEVQ
YVALRNINLIIQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASHN
NIAQVLSELKEYATEVDVDFVRKSVRAIGRCAIKVEQSAERCVSTLLDLI
QTKVNYVVQEAIVVIKDIFRKYPNKYESIIATLCEKLDTLDEPEARASMI
WIIGEYAERIDNADELLESFLDSFQDENTQVQLQLLTAIVKLFLKKPTDT
QELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTDPAAAKEVVLAEKPLIS
EETDLIEPTLLDELICHIASLASVYHKPPTAFVEGTGGLKRALPSRTGEE
DILSGEAASSGASASVIPEPGSLIGDLLSMDIGGGGSTAGSGGTGNVDIL
GGGLDMLGGGGSGGAGAPSTNSLLGDIFGLSGSSSATCYIPPKEIWLPAA
KGKGMEISGTFSRKNKQIHMELTFSNKAMQPMNQFAVQLNKNSFGLIPGQ
ALNVPNIPPNQTMDMSLPLNTNGPIQKMEPLTNLQVAIKNNIDVFYFACA
VPIHAFFVEDGNMEKKVFLATWKDIPSANEVQFTLENVECNADGVSAKMH
QNNVFTVAKRNLEGQDMVYQSMKFTNDVWALAELKIQPGNPTVTLAIKSR
ALDVCHGIFAVYDAILHN
back to top

mRNA from alignment at scaffold135_size322082:277346..280929+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold135_size322082-snap-gene-2.12-mRNA-1 ID=maker-scaffold135_size322082-snap-gene-2.12-mRNA-1|Name=maker-scaffold135_size322082-snap-gene-2.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3584bp|location=Sequence derived from alignment at scaffold135_size322082:277346..280929+ (Tigriopus kingsejongensis)
CTGACTGGAGCCAGGACTGGAGCTGTTAAGCGATCACCGACCTGAAATTG
AGTGACTGCTCGCCGGATCCGTTGGGTACTCCGGACATTCGCCACGATGA
CGGACTCGAAGTACTTCACCACCACCAAGAAGGGCGAGATCTTCGAGCTC
AAGTCCGAGCTCAACTCGGACAAGAAGGAGAAGAAACGGGAAGCCGTCAA
GAAGGTGAGCTAACCGATTGGGTGGGCGGTGCCTCATGAGCCCCATGAGC
CTCATGAGCCTCATGGTCCGCCTTGAGCTTGCAGGTGATCGCCTCCATGA
CCGTGGGCAAGGACGTGAGCGCCCTCTTCCCGGATGTGGCCAACTGCATG
CAGACCGACAACCTCGAGCTCAAGAAGCTGGTCTACCTCTACCTGATGAA
CTACGCCAAGTCCCAGCCGGACATGGCCATCATGGCCGTCAACACGTTCG
TCAAGGACTGCGAGGACGCCAATCCGCTCATCCGAGCCCTGGCTGTGCGC
ACCATGGGCTGCATTCGGGTGGACAAGATCACGGAGTATCTGTGCGAGCC
GCTGCGCAAGTGTCTCAAGGACGAGGATCCCTACGTCCGGAAGACGGCCG
CCGTGTCCGTGGCCAAGCTCCACGACATCAATGCGGCTCTGGTGGAGGAG
CAGGGCTTCCTGGACTCGCTCAAGGACCTGCTCAGCGACTCCAATCCCAT
GGTGGTGGCCAATGCCGTGGCCGCCTTGTCCGAGATCAACGAGGCCTCGC
CCTCGGGGCGACCGCTCATCCAGATGAACGCCCAGACCATCAATAAGTTG
CTCACGGCCTTGAACGAGTGCACCGAGTGGGGTCAGGTCTTCATCCTGGA
CTCGCTCGCCAACTACACGCCCAAGGACGAGCGCGAGGCCCAATCGATTT
GCGAGCGGATCACGCCCCGCTTGGCTCACGCCAATGCGGCCGTGGTCTTG
TCGGCCGTCAAGGTCCTCATGAAGTACCTGGAGATGATGGGGCCCGAGAC
CGAGTTCGTGGCCGGGCTGAGCAAGAAGCTGGCGCCGCCCTTGGTCACCT
TGCTCTCGTCCGAGCCCGAGGTCCAGTATGTGGCCCTGCGGAACATCAAC
TTGATCATTCAGAAGCGGCCGGACATTCTCAAGCACGAGATGAAGGTGTT
CTTTGTCAAGTACAACGACCCCATCTACGTCAAGCTGGAGAAATTGGACA
TCATGATCCGCTTGGCCTCGCACAACAACATCGCCCAAGTCCTCTCCGAG
CTCAAAGAGTAAGTGCTCACGGCTGAGTGGGCTCGAACTCGCCCCCTGAC
CCCGCTCTCGTTCGCTTAGGTATGCCACCGAGGTGGATGTGGACTTTGTC
CGCAAGTCCGTGCGGGCCATCGGCCGGTGCGCCATCAAGGTCGAGCAGTC
GGCCGAGCGCTGCGTGTCCACCCTGTTGGATTTGATTCAGACCAAGGTCA
ACTACGTGGTCCAGGAGGCCATTGTGGTCATCAAGGACATCTTCCGCAAG
TATCCCAACAAGTACGAGAGCATCATTGCCACGCTGTGCGAGAAATTGGA
CACGCTGGATGAGCCCGAGGCCCGGGCCTCCATGATTTGGATCATCGGCG
AGTACGCCGAGCGGATCGACAACGCCGATGAGTTGCTCGAGAGCTTCTTG
GACTCGTTCCAGGACGAGAACACCCAAGTCCAACTCCAACTCTTGACGGC
CATTGTCAAGCTATTCTTGAAGAAGCCCACCGACACCCAGGAGTTGGTTC
AGCAGGTACGCTAGCTGCCACACACCAGGCCCCCTAGATTCAGCGGGGAG
TCCCTCATCTGCCATTCACTTGGGACCCCGGATTAGGCGCTCGTTCACAA
TCGATGGGCACGCTATCGGCCCATATAGAAACGGACGGACGGGACGAAAG
GATTCTTTCCCATGACCCCCCCCAAGTCGAAACTGGCTACCCTATTTACT
TTTTGGCCATTGTAGCACTGGGCATGTCCTTGACCCGGCTTATCCCGTTT
CAGGTCTTGTCCCTAGCCACTCAGGACTCGGACAATCCCGACCTACGCGA
TCGTGGTTTCATCTATTGGCGTTTGCTCTCCACGGATCCGGCGGCGGCTA
AAGAGGTCGTCCTCGCTGAGAAGCCTTTGATTTCCGAAGAAACGGATCTC
ATTGAGCCCACTCTCTTGGATGAGCTCATCTGCCACATCGCTTCCTTGGC
CTCCGTCTATCACAAGCCACCCACGGCCTTTGTCGAGGGGACGGGCGGCC
TCAAGCGAGCCCTGCCCTCGCGCACTGGCGAGGAAGACATCCTCTCAGGG
GAAGCCGCCTCATCCGGAGCGAGTGCCTCGGTCATTCCCGAGCCTGGATC
CCTCATCGGAGATCTTCTGTCCATGGACATTGGCGGTGGTGGCTCGACGG
CGGGCTCGGGTGGCACTGGAAATGTCGACATCTTGGGTGGAGGATTGGAC
ATGCTGGGTGGTGGAGGCTCGGGAGGGGCGGGTGCTCCGGTAAGTGCTAA
CAAGCGAATCGATCGCTGGGGACACGTTGGACCAACTATTTTAATGTCTC
TTCTAGTCGACCAACTCCTTGCTGGGCGACATATTTGGTCTGAGCGGGTC
CAGCAGTGCCACTTGCTATATTCCTCCCAAGGAAATTTGGTTGCCGGCCG
CCAAAGGCAAAGGCATGGAGATTAGTGGCACCTTCTCCAGGAAGAATAAG
CAGATCCACATGGAGCTGACCTTCTCCAACAAGGCCATGCAGCCCATGAA
TCAGTTTGCCGTTCAGCTGAACAAGAACAGTTTCGGCCTCATCCCGGGTC
AAGCTCTCAATGTGCCCAACATTCCTCCCAATCAGACCATGGACATGTCT
CTTCCTTTGAATACTAACGGACCTATTCAAAAGATGGAGCCCCTCACGAA
CTTGCAAGTGGCCATCAAGAACAACATTGATGTCTTCTACTTTGCCTGCG
CTGTCCCCATTCACGCCTTCTTCGTCGAGGACGGCAACATGGAGAAGAAG
GTGTTCCTAGCCACCTGGAAGGACATTCCCTCGGCCAACGAGGTCCAGTT
CACCCTGGAGAATGTGGAGTGTAACGCCGGTAAGCTGACAATGGACTCAC
AGTACACGAGTACGAAGCACAGAGGTTTCGTTCGATATGATGGTGGATTC
AGCATATTTTCATGTCGTAAATTTACTTACAGATGGAGTCTCGGCCAAGA
TGCACCAGAACAATGTATTTACCGTGGCCAAACGAAACCTTGAAGGCCAA
GACATGGTGTATCAGTCGATGAAGTTCACCAATGACGTTTGGGCTCTGGC
TGAGTTGAAAATCCAGCCTGGAAATCCCACTGTTACGGTAAGGTTACAAG
GGAAAGGCGTAAGACATAAAGGACTTACTCTGATTATCCATTCCTTTGCA
GTTGGCGATCAAGTCCCGAGCCTTGGATGTCTGTCACGGAATTTTTGCCG
TTTACGATGCTATTCTCCACAACTAGACGCTGAGACGTTCAGGAGGTACT
CCTTTGATGATCCTTTAATTATGAGCTGAATGCATTCCCGTTACATCTTA
ATTATTGTTCCAATAAATATCTACAAATATCAGC
back to top
Add to Basket