maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1, maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1479_size39259-snap-gene-0.8-mRNA-1
Unique Namemaker-scaffold1479_size39259-snap-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1479_size39259supercontigscaffold1479_size39259:7676..11251 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
retinol dehydrogenase 13-likemaker-scaffold1479_size39259-snap-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:861maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:861Tigriopus kingsejongensisexon
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:862maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:862Tigriopus kingsejongensisexon
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:863maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:exon:863Tigriopus kingsejongensisexon
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:five_prime_utr-1957628Tigriopus kingsejongensisexon
maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1479_size39259-snap-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957630auto1957630Tigriopus kingsejongensispolypeptide
Tk03347Tk03347Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03347

>Tk03347 ID=Tk03347|Name=Tk03347|organism=Tigriopus kingsejongensis|type=polypeptide|length=324bp
MEIVTIVITVIALLGLLVAGVVVIRFMVQGKTCQSRCRIDDRTVLITGAD
TSVGIELVRDLCRRGARVIMAVKDMELGQDVAVEVRGETNGEVVVEYCDM
TSLKSVRDFTTKILEQESRIHVLINLASVMWCPLQRTPEGFEMHWGFNHL
SNFVMTQLLMPLLHRGAPDARIITVSSAWYKRGAIHWDDPNFNARKYNTV
EAYSQSKLANVLFTRELARKLDGTGVSTYCVNPGMILTGLGHHIIPGLGC
FWLTAALCCWLPWLKTSENAIQSILYCATEASLSEQSGLYYNECAVQLTT
EAGSNMDDAYRLWEMSERMAGLTS
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mRNA from alignment at scaffold1479_size39259:7676..11251+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1 ID=maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1|Name=maker-scaffold1479_size39259-snap-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3576bp|location=Sequence derived from alignment at scaffold1479_size39259:7676..11251+ (Tigriopus kingsejongensis)
CGGGAAGTCGCGGCTCACACGGCCCTCATAGAGCACGGAGCCACCGGAGG
AGGAGAAGCGGGCCAGCCAGAGTGCCGAGGTACACGCGACGGTGGTGGTG
GCGGTTCCAATTTATCTTGGACCCGAAGCGAAGGCAGACCCCCCTGTGTG
CCCCTTCTTCGGCCAGGGATTGAGCAATGTGCCAGCAGCTGAGCCTCATG
GTTCCCTGGCAGCGAGTGAGTGAGCATGGAGCATTGTGAGTGAAACCATC
CCCAGCAATTGAGGGACTCAGGTGCTGTGCTACCTGGCCCGAACCCTTGG
GCCATGCCCCAATCCCTCAGGCACCGCATCCCATCGCTGCTCTGAGGATC
AAACCACTCCTTCCTTGTTCAGGTACAGTTCAATTCAGGCCCCAAAGCTG
ATCCAACCCCGTGCGCAGAAGGTAGTTCCAGTCCCAAACTCTGTACAGCT
CGACTTTCTGCGTACGGGCGTATGCAATTTAGCCGAGCGTGCTGTCATCG
GAGTGAATGGCCCTCATTTGCCTTTAATTGCCATCTGACATTAATGCACG
AGTGTTTCACGATGATAAGGCCGAGTCGGGGGGGGAAACGACTTAACTGG
ATACTAACCATTCAAAAGGACCCACTGCCCAACCACCCAGCCGTGGGATG
GGCTCGTTGGAGGGAGCCTAATGAGTGCTTTGAGCGTGATTCAACGCCAT
CGGGAACATGCAGGATGGGAGGGAGCACAGTTACTCAAAAGTTCCATCCT
AGTGATGGTGGTGTTGACTCGAGCAGCCCACTCCGGGTGAGCCCGTTGGC
GGAGCGCACTTCTGCGTAAGCATCATTGTTTGGACGATGAGAGACCGTGG
GAGTCTCAATTTCACAAGAGAGCATCGGATTTCATCAACTCAATCCCGCC
TTGCATTCGACTACAACAACTCGTACGTTCAAAGGCGAAATGAGCGACAC
GGGAAGCACTCACCTACTACATACAAACATGCCCACTGGGCCAGACGGAG
AGTGTTCATACAACTGATGATCTGCCTGCACAGGCCGACTCGGAGAGCTG
GCTCGGATGGAGCAGCCAGGAGAATGAGTCGGGAAAATGGAGCCAATTTT
GTTTTATTGCAGGGCCACTACATATATTGTCGACTAGAACAGCGGTAGTT
AGGCCGAGGCCACGCTGCATGGCTAGATAGGACAGAGGGAGGGAAAAAAG
GCAGCCTCTTGAACTCTGCCTCGTAAATATTTGGACAAGACACTTGATCC
AGTCAGCTCTCGGTGGAGATTTCATCACTCTGGCCACGGGCAGAGTCATC
ATCGCCATCGTCGCCATCATCCAATCGATGGCAGGTGGAGGGTGAAGAAA
TTCGACAATAGCCCACCGCCACCAAAGAACGGCGACGTTGTTTGGAATCG
GGGGCACAAGTGTTACTTACTCTGCTTGTCGGCTAATCGCCCACAGATCG
TGATTTATTTGCTACAGCGCTCTGACACAAGCCATCCCATCCCAACTCGT
TCGGGCCTCGTCGCTGTAGCGCGTAATAAGCAGTCCATTTACATAATCGA
ATCATCCACATGGACCCCAAGCATACCAACCATTGACCCATTTTTCCATC
TTCCCCAGGCCTCGCTCGACATGCGGCTGGAGTAGTGCACCATGGAGATT
GTCACCATTGTCATCACCGTGATCGCGCTCCTTGGCCTCCTGGTGGCGGG
CGTGGTGGTCATCCGGTTCATGGTCCAGGGCAAGACCTGCCAGTCCCGCT
GCCGCATCGACGACCGCACCGTGCTCATCACCGGGGCCGACACGAGTGTG
GGCATCGAGCTGGTCCGCGATCTGTGTCGACGAGGGGCTCGGGTCATTAT
GGCCGTCAAGGATATGGAGCTGGGCCAGGACGTGGCCGTGGAGGTGCGGG
GCGAAACGAACGGTGAAGTGGTCGTGGAATATTGTGATATGACTTCGCTG
AAGAGTGTCCGCGACTTTACCACCAAGATCCTCGAGCAGGAGTCTCGGAT
CCACGTCCTCATCAACCTGGCCTCGGTGATGTGGTGTCCCCTCCAGCGAA
CGCCGGAAGGCTTCGAAATGCACTGGGGCTTCAATCATTTGTCTAACTTT
GTCATGACACAGCTCCTTATGCCGCTCCTACATCGAGGGGCGCCCGATGC
TCGGATCATCACCGTGTCCAGTGCATGGTACAAAAGGGGCGCCATCCATT
GGGACGATCCCAACTTCAATGCCCGAAAGTACAACACCGTCGAGGCTTAC
AGCCAATCCAAGCTCGCTAATGTGCTCTTCACGCGTGAACTGGCCCGCAA
ACTGGACGGAACCGGTGTGAGCACGTAAGTGTCAAATGCTAATATGCTTC
CCAATGGACTTTCGTTGTTGGTCACCTTGGCCCTCTTGGGTACGAGGTTG
GTTGAGGAATGTTAATTCCGCTCTGAACGATACAAAGTTCAAAAACCCTC
GAAAACAACCAAGCCACAAACATTTTCCCGCGGTAGAAAGTGACAAAATA
CAATTTAATAACACAGCCTTCTGGAAAGTCACTGCAGTTTCTTGATGTTC
TGCGCAAAGCGTTGTTCCTTTTTTTTTAATTAGCACGACTTCCGAGGTCT
TCCCAAAGCCCCCCTAAGACGCAGGGCCGCGGTTTTTTTTATGAAGACAC
AAGGTCGTGTGTGGTCTCCAATGGGATTGCCCTCTGGAACAAGTGCCCCA
CCCTCAGATCAAGACCAAGTGGATGGTCAGTGGTCGTGGTTCTCTGGAGA
TTGGCCTCTCACGCAGTCTGTTCCAAGTCTAGCCAAGCATGAGTCACACA
CATTTTTAGGTCCAACCATGCCTCGCATAACAGCTGTACTTTTGGCGCTG
TTTTTCTCAGATTAGAACCTGACACTGTTTGACACAACAAAATGCTCGAA
GTGCATTCGTGCTTCGAGAATCAGTGAAATGTACTGTATACACGATAGCA
CATGTGCGCCAATCAACGATAGGAGGCTAACCTGCTGGCTCAATCGGGTA
CCAAAGAGGGGGGGGGCAAATTTGCGGTCCTTGAAAGGTTCCTTGGTCCT
ATCTGGAATAGCAGTGCGTATTCGTTTGAAAAGTCCAAAGTTCCCAGGTC
CTCCGAAGGCGAAGCAAGCCTTGTGGTGGAGGATTAAGCTGAAGCACGGT
TACGCACCGGCAATAGGAAGCACACGTGTTCACTCAGCCTAAGACTAAAC
GGGGTCCTAGCGGAGCATATAGCCTTTGGTAATCCTAGTACAGCGCTCGG
GACACTGAAAATAATGTGTGTGTGTTGCTTTCAGGTACTGTGTGAATCCT
GGGATGATCCTCACCGGCCTCGGCCACCATATCATTCCCGGTCTGGGCTG
TTTCTGGCTCACGGCCGCCCTCTGCTGCTGGTTGCCCTGGCTCAAGACCT
CAGAGAATGCCATTCAGAGCATTCTGTATTGTGCCACGGAAGCCAGTTTG
TCCGAGCAATCGGGATTGTATTACAATGAATGTGCCGTCCAATTGACAAC
CGAGGCCGGGTCCAACATGGATGACGCCTATCGGCTCTGGGAAATGAGTG
AGCGGATGGCTGGATTGACATCCTAA
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