maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1, maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1
Unique Name	maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1505_size38140	supercontig	scaffold1505_size38140:28408..35812 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
sortilin-related receptor	maker-scaffold1505_size38140-snap-gene-0.5	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1969847	auto1969847	Tigriopus kingsejongensis	polypeptide
Tk08777	Tk08777	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold1505_size38140:28408..35812-

protein sequence of Tk08777

>Tk08777 ID=Tk08777|Name=Tk08777|organism=Tigriopus kingsejongensis|type=polypeptide|length=2147bp
MVQLTPPGRGALVAGLLLLCGLSNLVSGLRPLRPEPHPNVNHVRLDPSEA
RLVKRDAPAASGNATTDGPDLVRVNDLASAFHLNDSHLHLMVHWAGQGSS
IMFCLARDQEMKAGATSKVFYSTDYGFTFSDISEEFKLEDGQLATLARFY
YHPMSNCHYVFTDTVHRYIFTSTDCGRTFVGHKLEIIPELIEFDKNQDKV
FLIHDLIDDEKKLYVTKNFGQTFSRVQDYVKGFFFEYGTDHTILYVQRLE
PPGNRTTILSSANYFERQIDTRVIYVSAQDFELKEHFMFVTRPSKANASH
LDLFVSSQGERFVPVKLGNDLPTLDFHIIDVTEDGEVMICVNHGPTLSNL
YTSVRITHHEVEFTLSLERIMFYNPDVTWHDSWLADTAGDQQFADVYKIE
GLRGIYIASQISEKSMNLDQIQPDDLITLITFDQGAMWSKVIGPETDEEG
YKFPNCDHSCSLHIAQQLSKRFPSTRSIPVLSSKSAVGIVMATGNMGMNL
SHRSNVFLSADAGLSWHQVLKGSYYFNIGDHGGIIVAVKYYKTEGWTNEL
LYSTNEGLDWKSIVFYKEPLRIFGLLTEPKENTTIFTMFGTAKNAKGPGI
EWIIITVDLRTVFDHNCTEDDYKRWSPADNSLGKHRNCILGRKEVYERRM
INSNCYNGLDYERRVTMENCGCDRSDFMCDFGFIKDNEWTTDCVKDTRFQ
HDSYGVPATCKSGQFYNRTRGYVKIRGDTCLDGKASRYEPLRVPCPVKEE
KEFLLMSERSNIVRVNLRNTSEIDRLPLVNASNVVSLEFDMEDNCVIYGD
IELDKIFIQCLNGSEPRALVENNLESVEGMAYDWITKTLYFADGPRHSIE
LIRVDLQNQGRMRKTIMQGKVSRPRGLAIHPMEGYLFFTDWNKMHPQIGR
ANLDGSDRKVLFTRPLVQWPNGLSIDYIANRVYWVDADKDFIASCNLEGT
GFKKVLSGSVLVHPFAISIFKELMYWNDWNRKALYYADKNTGNGTTLIMK
NEVGVMDMKIFSSIHRSGTNACSQSPCSHLCVGMPAPKNYQCLCPNGMKA
EQTGSKMLCKCPDGSLPSKDGTCPQTNGKCGTSQFTCDSKVCIPLLWKCD
GDDDCGDGSDEAQCSREKCREFQFQCSNGKCIPDYWKCDFDDDCGDGSDE
RDCGKAQCTKEQFRCNNGECISSKWRCDHERDCQDGSDEVNCTTIAPNCK
ADEFRCPDAGQCLPNSWKCDGDNDCPGGADEENCDGQRCKDFQFTCGNGH
CIFQTWVCDNQTDCSDGTDEVDCENQTTLSPELPLPVFPQGECNEWMFKC
HNDQCIPFWWKCDGTPDCTDASDELECNIPNKGTSDSTTLEVPTTPVSNG
CSANNKFECGDGQCIWQAWVCDNDKDCLGGEDEDPTICRGRPSCGHDQFR
CELSGECLDSSRICDGRQDCSDGSDENGCRDDLSPVHPQCGENEFMCDGG
NCVASSLICDGHRDCEDLADEMFCDHGVIKVRGLEADVNQISNATIKIHW
YMSDALHKNDWEFSPGYSVQGINHWIFMDWAKISDYSFTFKNLYPATTYN
ITVNIREGAHLYNFTNFALATTAPYRPTPPVITSVSQEGSKVKVTWAPPR
NPNGELKFYVIEIMPTGRTYEREPGETTAILDALLTPKTKYQFTVTAINT
AYSGEPSESFDFVYGANFVDEKVEGLQIVAVDESSVSIRWDANSGVENFK
VNYKTNNPLATYDDVLVAANMTEKVTLSSLSPNESYALSVSALRHGDSGE
PSRINFRTPGTTLPRPIITNAKVTVVSATSIKLTWSLPEDEKRKEEWEFG
VYFGLNYADIMGTSNSITTRETSATISNLRACESYSFIVAVVGPHGYGPA
SQERTLSTKYAAGAPPKNLKGYVEDANDQLNLHVHWDASCDQMDVSIGYH
LSIKDLTSNHTTRQQFAKVSNTSFHHIVQGVHYSTRYEIQVQTNVPDSVP
TSPVWVHTPPIPAPVSVTHHYTEGDSNKQMIYWRKANNLPTYIKEDFTYR
MFLSREANLSDPIVYDVERPPYEIPVKSLTPGSIYFVGVALVDNDGYASK
LSTPVPFEVPVPEEDMVIPKSSAIGIVLPLLIAIVVLGAGLGYYVHRNRR
ITRNFQAFASRYSPASGAAILNQASLDDDDDSPIIRGFSDDEPLVVT

mRNA from alignment at scaffold1505_size38140:28408..35812-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1 ID=maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1|Name=maker-scaffold1505_size38140-snap-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7405bp|location=Sequence derived from alignment at scaffold1505_size38140:28408..35812- (Tigriopus kingsejongensis)
ATGGTCCAGCTGACGCCACCCGGGCGTGGAGCCCTGGTGGCCGGCCTCCT
CCTGCTATGCGGGCTTTCGAACCTCGTGTCCGGATTACGGCCGCTGCGAC
CCGAGCCCCATCCCAATGTGAACCATGTCCGCTTGGACCCCAGTGAGGCG
CGCTTAGTGAAAAGAGACGCGCCTGCCGCCAGTGGGAACGCCACTACCGA
TGGACCCGATCTGGTCCGCGTCAACGACTTGGCCTCGGCCTTCCATTTGA
ACGATAGTCACTTGCACTTGATGGTGCATTGGGCGGGCCAAGGCTCGAGC
ATTATGTTCTGTCTGGCCCGAGACCAAGAGATGAAAGCCGGTGCCACCTC
CAAAGTGTTCTACTCCACCGATTACGGATTCACTTTCAGCGACATCTCGG
AAGAATTCAAATTGGAGGATGGTCAATTGGCCACCCTGGCCCGTTTCTAC
TATCACCCCATGTCCAATTGTCACTACGTCTTCACCGATACCGTGCACCG
CTATATTTTCACCAGCACGGACTGCGGGCGCACTTTTGTGGGTCACAAGC
TGGAGATTATTCCCGAGTTAATCGAGTTCGACAAAAACCAAGACAAAGTG
TTTCTGATTCACGACCTGATTGATGACGAGAAGAAGCTTTATGTGACCAA
AAACTTTGGGCAGACATTCAGTCGGGTGCAAGACTACGTGAAAGGCTTCT
TTTTCGAGTATGGCACGGATCACACCATTCTCTATGTTCAGCGTCTCGAA
CCACCTGGGAACCGCACCACTATCCTGTCCTCGGCCAACTACTTCGAGCG
ACAAATCGACACCCGTGTCATTTATGTGAGTGCCCAGGATTTTGAATTGA
AAGAGCATTTCATGTTCGTCACCCGCCCCTCGAAGGCTAATGCATCGCAC
TTGGATCTGTTCGTGTCATCGCAAGGGGAACGTTTTGTGCCAGTCAAATT
GGGCAACGATCTACCTACTCTGGATTTTCACATTATCGACGTAACCGAAG
ACGGTGAAGTGATGATATGCGTCAACCATGGACCCACGCTCTCGAACCTC
TATACTTCGGTCAGGATCACTCACCACGAGGTGGAATTTACCCTTTCCCT
GGAACGGATCATGTTCTACAATCCGGACGTGACCTGGCACGACTCCTGGT
TAGCTGACACGGCTGGCGACCAACAGTTTGCCGATGTGTACAAAATTGAA
GGACTTCGGGGGATATATATTGCGAGTCAAATCTCGGAAAAGTCCATGAA
CCTTGATCAAATTCAGCCAGACGATCTAATTACGCTCATCACGTTCGACC
AAGGCGCCATGTGGTCCAAAGTCATCGGCCCCGAGACCGACGAAGAGGGT
TACAAGTTCCCAAATTGTGATCACTCCTGCTCCCTTCACATTGCCCAGCA
ACTGAGCAAACGTTTTCCCTCCACCCGATCCATTCCAGTTCTGAGCTCCA
AGTCGGCAGTGGGCATCGTTATGGCCACTGGCAACATGGGAATGAATCTC
TCGCATCGCTCAAATGTGTTTTTGAGTGCCGATGCGGGATTATCTTGGCA
CCAAGTTCTGAAAGGCTCCTACTATTTCAATATCGGGGATCACGGTGGAA
TCATCGTGGCTGTCAAGTATTACAAGACTGAAGGATGGACCAACGAGTTG
TTGTATTCCACGAACGAGGGACTCGACTGGAAGAGTATTGTATTTTACAA
GGAGCCCCTCCGGATATTTGGCCTCCTGACCGAGCCGAAGGAAAACACCA
CCATTTTTACAATGTTCGGAACGGCCAAAAATGCCAAGGGCCCCGGAATC
GAATGGATCATTATCACAGTTGATTTGCGGACTGTCTTTGATCACAATTG
CACCGAGGACGACTACAAACGTTGGTCTCCGGCCGACAACTCGTTGGGGA
AGCATCGCAATTGCATCTTGGGACGCAAAGAGGTCTATGAGCGCCGCATG
ATCAACTCGAACTGCTACAACGGACTCGACTATGAGCGTCGCGTGACGAT
GGAGAACTGCGGGTGCGATCGCTCCGACTTCATGTGCGACTTTGGCTTCA
TCAAGGACAATGAATGGACCACGGATTGTGTGAAGGACACCCGGTTCCAA
CACGACTCATATGGTGTTCCAGCCACGTGCAAGTCCGGTCAGTTCTACAA
CAGGACCCGTGGTTATGTCAAGATACGGGGTGACACTTGCCTTGACGGCA
AAGCTTCGAGATACGAACCGTTGCGTGTGCCTTGTCCAGTCAAGGAGGAA
AAAGAGTTTCTTCTCATGTCTGAACGTAGCAACATTGTCCGAGTCAACTT
GAGAAACACATCTGAAATCGATCGCCTTCCTCTGGTGAATGCAAGTAACG
TGGTTTCCCTGGAATTTGACATGGAAGACAATTGCGTGATCTACGGTGAC
ATCGAGTTGGACAAGATATTCATCCAGTGCTTGAATGGGTCCGAGCCAAG
AGCGCTCGTCGAAAATAACTTGGAGAGTGTGGAGGGAATGGCCTACGATT
GGATTACCAAGACGCTCTACTTTGCTGATGGACCTCGCCACAGTATCGAA
TTGATCCGTGTCGACCTCCAAAATCAAGGGCGGATGAGGAAGACCATCAT
GCAGGGCAAAGTGTCCCGACCTCGAGGCCTAGCCATTCACCCCATGGAGG
GCTATCTATTCTTTACGGACTGGAACAAGATGCATCCACAAATTGGACGA
GCCAATCTCGATGGCTCGGATCGCAAGGTTTTGTTCACCCGACCGTTAGT
GCAATGGCCGAATGGCCTCTCCATCGACTACATTGCCAATCGAGTGTATT
GGGTGGATGCAGATAAGGATTTCATTGCCTCTTGCAATTTGGAAGGCACG
GGCTTCAAGAAAGTTCTATCCGGCTCGGTTCTTGTTCACCCTTTCGCCAT
TTCCATTTTCAAGGTATGTTCATGTTTTCTCTTAGGAGATGCAAGAAGCT
GTCTGATGTACCAATCACTCACTTTAGGAGCTGATGTATTGGAACGATTG
GAACAGGAAGGCCCTCTACTACGCCGATAAGAACACCGGCAATGGCACTA
CTCTCATCATGAAGAATGAAGTTGGTGTCATGGATATGAAGATTTTCAGC
TCCATCCACCGCTCCGGGACAAATGCCTGCTCACAAAGTCCTTGCTCGCA
CCTTTGCGTGGGGATGCCGGCCCCGAAAAATTACCAATGCCTCTGTCCGA
ATGGTATGGATCAGTGAGCCGAACTGTGCCCAGAGGAGATTATTAAACTT
TCGAATCTGTTTGCAGGAATGAAAGCCGAACAAACGGGGAGCAAAATGCT
CTGCAAATGTCCGGATGGATCGTTGCCCTCCAAAGACGGCACGTGTCCCC
AAACCAATGGAAAATGTGGAACCAGCCAATTCACTTGTGACTCGAAAGTG
TGTATACCTCTCCTATGGAAATGCGATGGTGACGATGATTGTGGAGATGG
TTCGGATGAGGCTCAATGTAGCCGGGAGAAGTGTCGCGAGTTCCAGTTCC
AATGCAGCAACGGCAAGTGCATTCCCGACTACTGGAAGTGCGACTTCGAC
GATGATTGCGGTGATGGATCGGACGAGCGCGATTGTGGGAAAGCCCAGTG
CACCAAGGAGCAATTCAGGTGCAACAATGGGGAGTGCATCTCGAGCAAAT
GGCGTTGTGATCACGAGCGAGATTGTCAGGTAATTCGTTGTTCATTTTTC
ATGCATGTGTCTCTGAACTACGTACATGAGCGTCTTTTTAATCAACAGGA
TGGGTCGGACGAGGTTAATTGTACCACAATTGCTCCCAATTGCAAAGCTG
ACGAGTTCCGTTGTCCAGATGCTGGACAATGCTTGCCTAACTCTTGGAAA
TGTGATGGAGACAAGTAAGTTCTTTACTCTTAATGTTGACAGCTAATTTG
AATGACTAGTGCACCTCTATTTTCACTTTTGTAGCGACTGTCCAGGGGGT
GCGGACGAGGAGAACTGCGACGGTCAAAGGTGCAAGGATTTTCAGTTCAC
TTGTGGCAACGGGCATTGCATTTTCCAAACCTGGGTGTGCGATAATCAAA
CCGACTGCTCAGACGGAACAGACGAGGTGGATTGTGAAAATCAAACGACT
CTGTCTCCCGAATTGCCTTTACCCGTGTTTCCACAAGGTAAGATACCCGA
GTACTCTTGGGAATGTATGCAGTTATCTCATTAATTGGAACATTTTTTTA
GGAGAATGCAACGAATGGATGTTCAAATGCCACAACGATCAATGCATTCC
CTTCTGGTGGAAGTGGTAAGACTTGAAGAATTGAACCAAACCCTGATTGA
GCCATCTCTTACTAATCCAGATGTCCCATTTAGCGATGGAACCCCAGACT
GCACTGATGCCAGTGACGAACTGGAATGTAACATCCCAAATAAAGGGACA
TCCGATTCCACAACCTTAGAAGTTCCCACTACACCTGTGTCCAATGGTGA
GTTGGAAAAACGCTCTCAGTGACTCATCCTAATTCATCTCACTTGTTTCA
CAGGCTGTTCTGCCAACAACAAATTTGAATGCGGGGATGGACAATGCATC
TGGCAAGCCTGGGTGTGCGACAACGACAAAGATTGCCTTGGAGGCGAGGA
CGAAGATCCAACCATTTGTCGCGGTAGACCCAGCTGCGGGCACGATCAAT
TCCGATGCGAGCTCTCCGGGGAGTGCTTGGATTCCTCCCGGATCTGCGAT
GGTCGCCAAGATTGCTCGGACGGTAGCGATGAGAACGGCTGCCGTGATGA
CCTTTCCCCTGTCCACCCCCAATGTGGCGAAAATGAGTTCATGTGCGATG
GCGGTAATTGTGTTGCCTCGAGCCTCATTTGCGACGGTCACCGGGATTGC
GAAGATCTCGCCGATGAAATGTTCTGCGATCATGGGGTGATCAAAGTGCG
CGGGCTAGAGGCGGATGTGAACCAAATTTCGAATGCCACCATCAAAATTC
ACTGGTACATGTCGGACGCGCTTCACAAAAATGACTGGGAGTTTTCTCCA
GGCTACTCAGTTCAAGGGATCAATCATTGGATCTTCATGGATTGGGCCAA
GATTTCGGACTACTCCTTCACCTTCAAGAACTTGTATCCGGCCACGACCT
ACAACATCACTGTGAACATCAGAGAAGGCGCACACTTGTATAACTTTACC
AATTTCGCATTGGCCACAACCGCTCCGTACCGTCCAACTCCACCGGTTAT
CACGAGCGTGAGCCAAGAAGGTTCCAAGGTAAAAGTGACCTGGGCTCCCC
CACGAAATCCCAACGGAGAGCTCAAGTTTTATGTCATTGAAATCATGCCC
ACTGGTAGGACGTACGAGCGGGAACCTGGCGAGACCACGGCCATTTTGGA
TGCGTTGCTCACTCCCAAGACTAAGTATCAATTCACCGTAACTGCCATCA
ACACGGCCTACTCGGGTGAGCCCTCTGAATCCTTCGACTTTGTCTACGGT
GCCAATTTTGTGGATGAGAAAGTTGAGGGGTTGCAGATTGTTGCTGTGGA
TGAGAGCTCCGTCTCGATTCGATGGGATGCCAATTCAGGAGTGGAGAATT
TCAAAGTGAATTACAAGACCAACAATCCTTTGGCCACCTATGACGATGTT
CTCGTTGCCGCCAACATGACCGAGAAAGTCACACTCTCAAGCTTGTCGCC
GAATGAGTCCTACGCTCTGTCCGTGTCTGCGCTCCGGCACGGGGATAGTG
GAGAGCCTTCAAGGATCAACTTCCGGACCCCAGGAACCACTCTTCCTCGA
CCCATTATCACCAACGCTAAAGTGACCGTAGTGAGTGCGACCTCGATCAA
ACTGACTTGGAGCCTCCCCGAGGATGAGAAGCGGAAAGAGGAGTGGGAGT
TTGGAGTCTACTTTGGCCTCAACTATGCGGACATAATGGGTACGAGTAAC
AGCATCACCACCCGAGAAACCAGTGCCACTATCAGCAATCTAAGGGCTTG
TGAATCCTACAGTTTCATTGTGGCTGTAGTGGGTCCGCACGGATATGGTC
CTGCCTCTCAGGAGCGAACACTCTCCACCAAATATGCTGCCGGGGCGCCA
CCCAAGAATTTGAAGGGCTACGTCGAAGATGCCAATGATCAGCTCAATCT
CCACGTCCATTGGGATGCATCCTGCGATCAAATGGATGTCAGCATTGGCT
ATCATCTCTCGATCAAGGATTTGACGAGCAATCACACGACTCGTCAGCAG
TTCGCCAAGGTCTCCAACACTTCGTTTCATCACATTGTCCAAGGTGTGCA
CTATAGCACCCGCTATGAGATCCAAGTCCAAACCAATGTTCCCGACTCCG
TGCCCACCAGCCCAGTGTGGGTCCATACACCGCCTATTCCGGCTCCTGTG
AGTGTAACCCACCACTATACCGAAGGCGATTCCAACAAGCAAATGATCTA
CTGGAGGAAGGCGAACAATCTTCCGACCTACATCAAAGAGGACTTCACTT
ATCGGATGTTCCTATCCCGGGAAGCCAATCTGTCGGATCCGATCGTGTAT
GATGTGGAGAGACCCCCCTACGAGATCCCCGTGAAGAGTCTCACCCCTGG
TAGCATCTACTTTGTCGGCGTTGCCTTGGTCGATAATGATGGCTATGCCT
CCAAGTTGTCCACCCCCGTTCCCTTCGAGGTCCCCGTTCCAGAGGAGGAC
ATGGTCATCCCGAAGTCGTCGGCCATTGGGATCGTCTTGCCACTCCTTAT
TGCGATCGTTGTGCTGGGAGCTGGCTTAGGCTACTACGTCCACCGAAACC
GTCGGATCACGCGAAATTTTCAGGCCTTCGCCAGCCGATACAGTCCTGCT
TCGGGAGCGGCCATTTTGAATCAGGCTTCCTTGGACGATGACGACGACTC
CCCAATCATTCGTGGATTTTCCGACGACGAGCCATTGGTCGTCACTTAGA
AGTAATCGCGATAGTCCAAGAAGTAGTGCCCAGCGTCCACCACCATCTCC
TTGGTGAAAGTTCTGGGAAAATGTGATAAAAGTACCTACAGATGAAGGAG
TCGTTGGAAGAATCATGTAATGTGGACTGAGATCCATGTGTGCCGAGGGT
TCGAACCAGAAAAGTTCCCTCTCAATTTCAATTTTTAAAACAACTATGTG
CAACATAACTATTTGTGATGTTTCGTTTGTCTCATTTCCCTTAGATCATC
AACCTTAAATTCGGTAACTTCGGTCTGAAGTGACACACACTTATGGAAGG
GTCCTAAATCTGAGGCTTCTGAAGTTTCATCGCTATGTCAAAAAAACACC
AACATCTCAAAGTAACGACTTTGCCTAAGTTGTGCAAAAGACGAATGATG
AATGTCGTATGCATTTTTTGTCAGAAGGCTTGTGAGAAAAGCGCCCATAT
TTTTGTCTCTTCATCTGACTAGTTGTAACAAGTGTAATAAATGAGAAAAA
AACAA

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