maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1, maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1
Unique Name	maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1516_size37830	supercontig	scaffold1516_size37830:34285..37609 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
galactoside 2-alpha-l-fucosyltransferase 1	maker-scaffold1516_size37830-snap-gene-0.10	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1972298	auto1972298	Tigriopus kingsejongensis	polypeptide
Tk12638	Tk12638	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold1516_size37830:34285..37609+

protein sequence of Tk12638

>Tk12638 ID=Tk12638|Name=Tk12638|organism=Tigriopus kingsejongensis|type=polypeptide|length=632bp
MACPDLALENGCIPFDIDANSVITHHCNGRLGNQMFTYLILASLKIHFGY
QAVVTHAIADTLLPYFEGLDLPEASHLCGFDASYSVFRIVHTKRFDLLST
SGVNMPPSPYPWEVFPNERSVFELASTEYHKGRALILFPQNYSPKVVEFE
FYNKAPHIDVILDKAFTVRQGFMDEASAYLIRIAADFRAKKTKNAKRAKK
SKQPLTYVGIHSRRTDHLAFEVENNYVELRPSYYLKAMDLFRDKFKNVIF
VYISDDVPWGKAKLTPRNKAGDLYFGADGLPEGMDSLGFDLALMKLCNHT
IISHGTFSYWVGFLAGGSVITPNHFEEFSQNTECSQGPGAPSADDPESCP
SQCEAFDPEAKTFLLRDSNGRLGNQMFAYMLLLSMNMQFGYRPLLSRRTF
NSLNPFFANLGMDVAEDVVCDFNETYSAYRGHIKEQRMELIADYIRKQVG
HDIELVKDDKGRWKLPPQVANDPNIDTERVIHSEKFKSVDVSQVPPSSYP
WEVFTQDRLIMELAKAEYQTGRAVILFPENYSASRNESRFINNGPGVLEA
LTKTFTLRGHFMESAEVRLNHIRAIHMEKMATKSGKKGKKSKKPITFVGI
HSRRTDHLSFEQELGQVPLKPSYYLEAMEMYR

mRNA from alignment at scaffold1516_size37830:34285..37609+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1 ID=maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1|Name=maker-scaffold1516_size37830-snap-gene-0.10-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3325bp|location=Sequence derived from alignment at scaffold1516_size37830:34285..37609+ (Tigriopus kingsejongensis)
GTAGCGTTCGGCTTAACGGGTGTAAGGAGGTACCATGGCGTGTCCGGATC
TTGCACTAGAAAATGGGTGCATTCCATTCGACATCGATGCCAATTCTGTG
ATTACCCACCACTGTAATGGGCGACTGGGCAACCAAATGTTCACTTATCT
CATCCTCGCTTCGCTGAAGATCCACTTCGGATATCAGGCCGTCGTAACGC
ATGCAATCGCAGATACCCTGCTACCCTACTTTGAAGGACTTGACCTCCCG
GAAGCGTCCCACCTGTGTGGCTTCGACGCAAGTTACTCTGTTTTTAGGTG
AGTTAAATCCCTTAAATTTTGTAAAGTAACATGCCCTAACATAATGAATT
TGATAGCCAAAACATTCGAGAGAACAGACTGGAGAACATTCGAAAAGAAA
TCATCCGTCAACATGGATCCGAGGTAGAATTGGGGCAAGACGACCAAGGA
CGATGGCAGGTTCCGGCCGAAGTGCGTGCCAATCCCAATGTCAGGATTGA
AGAGTAAGTGAAATGTAATATTTGTGACGTGAACTGCATATGTAACACGA
ACCTCTAAAAGAATGGAACATTTGAGTAATTAGGACGGTTGGCTTTATTT
ATATTGTGTTCGAAAACAATCGAACTTCAATTTAATTGTGCCGGTTGATT
TTAAGCTATTCACATATTGGAAAGAAGCCAAGTCAATGACATATCTTTTA
ACTAAAGCCTCACTCCTCCAATAGTAAACCGATACGATTTTTAGACGGGG
TTTCTAAAACCAAATGTAACCGAGTTAACAAAATTCTAGTCAAAGGGAGT
TAATATTCTTAAAGCCAACAGTTTTTGTCCAAATAAGTTAACTCAGTGAA
ACTTATGCCGAGCAAAACAACTATTATTACAACTTAGTGATTAAACATGA
GTGTTTTATGTGGTGACTTGAATTAAAGGTTTCCCACAGGATAGTCCACA
CTAAACGTTTTGATCTACTCTCCACATCCGGCGTGAACATGCCACCCTCT
CCGTATCCTTGGGAGGTGTTTCCGAATGAGCGATCTGTCTTTGAATTGGC
CTCTACCGAGTATCACAAAGGACGCGCTCTCATCCTTTTCCCACAAAATT
ATAGCCCTAAGGTTGTCGAGTTCGAGTTTTATAACAAAGGTAACATTTAC
TCACAACACGACAAAAAAAATCGATCTCTTCTATAATCCGTCCTCCATTG
CTTCAGCCCCTCATATTGACGTGATCTTGGACAAAGCATTCACAGTACGA
CAAGGTTTCATGGACGAGGCCAGTGCGTATCTGATCAGGATCGCGGCTGA
TTTTCGGGCGAAAAAGACGAAAAACGCCAAACGGGCTAAAAAGTCGAAGC
AACCTTTGACCTATGTTGGCATTCACTCAAGGCGAACGGATCACTTGGCC
TTCGAGGTCGAAAATAATTACGTCGAGTTGCGACCGAGCTACTACCTCAA
GGCCATGGACTTGTTCAGGGACAAGTTCAAGAATGTCATCTTTGTCTATA
TTAGCGACGATGTCCCTTGGGGAAAAGCCAAACTTACGCCGCGAAACAAA
GCCGGAGATTTGTATTTCGGGGCTGATGGTTTACCTGAGGGTATGGACAG
GTGAGCTCTTTACTTGTAGTTGTTTCTTGTGCTAATTTCATACGATCATA
ACGTCCGTTTCAGTTTGGGCTTCGATTTGGCCCTCATGAAGCTCTGCAAT
CACACTATCATTTCCCATGGGACTTTCTCCTACTGGGTCGGGTTTTTGGC
TGGCGGATCCGTGATCACTCCCAATCATTTTGAAGAGTTCAGGTAAACCC
ACTAAGCTTGTCATTTCCTGGAAGAGGTTGGAAAAATATTTCTTGCTTGC
AGGAAACCTTATCCGATGGACGATTTGTACCTACAACATCCACTGGACTA
TCCACTTCCCAGGTTATACTCGTATGTCTAATTATCTGAATATATTTTTA
ACTGGCGTGAGCAGACGTGCTTTAATTCCCATGTGATATATACTGTATAT
CAACTACTAATGTGCTTAGGTCAATAAATCAGTGCGGCGTCTTCCTAGTG
ACTGGACAATAAAGTGTACGCAAATGTGCGCTTCTCTTCCCTCTTGATAT
TGGTTACTCAGCAGATTTGGCAGCGCCGAACTTGTCTCGCAAACAGTGAG
CAATGTTCTTCCAGTACAACCTTTGTGTGATTCTTGTTTTAACTGTGATA
AATAATGTACAAGTTGCAAGTCAGAATACAGAATGCTCCCAAGGCCCAGG
AGCACCATCGGCGGATGATCCAGAGTCGTGTCCCTCTCAATGTGAAGCCT
TTGATCCAGAGGCCAAGACGTTCCTGCTCAGAGACTCGAATGGTCGGTTG
GGGAATCAAATGTTCGCCTATATGCTCTTGCTCTCCATGAACATGCAATT
TGGATATCGGCCTCTCCTGAGTCGGAGAACTTTCAACAGCCTCAATCCGT
TCTTTGCCAACCTCGGCATGGATGTGGCGGAAGATGTGGTTTGTGATTTC
AATGAAACCTACTCGGCTTACAGGTGAGGAAGGTCCTGAATTCCAGTATA
TGTAGTCCGGATACGCTAACCTTCCCAATGCAGGGGCCACATCAAGGAAC
AGCGGATGGAGCTCATCGCCGATTACATCCGCAAGCAAGTGGGACACGAT
ATCGAGTTAGTGAAGGATGACAAGGGTCGTTGGAAACTACCCCCACAAGT
GGCCAACGATCCAAACATTGACACAGAGAGGTGGGGCGATTCCTTTGGGT
ACGGCAGAGCTCTTTTCCAATGTTGCACCCTCGTCTTTCCTATCCAGAGT
AATCCATTCCGAGAAATTCAAATCGGTGGACGTCTCCCAGGTACCTCCAT
CATCCTATCCATGGGAGGTGTTCACACAGGACCGGTTGATAATGGAACTT
GCCAAAGCGGAGTATCAGACAGGGCGAGCAGTCATCCTCTTCCCCGAAAA
TTACAGCGCTTCGCGAAATGAGTCCCGTTTCATTAACAATGGTAGGTCGG
CGAGTGGTCGTGGGCAACGAGGACTTTTGACCAAGCTGGAGAGCTTTTTT
CCGTAGGTCCTGGAGTCTTGGAGGCATTGACCAAAACGTTCACGCTTAGA
GGGCATTTCATGGAATCGGCTGAAGTGCGGCTCAACCACATCAGGGCAAT
TCACATGGAGAAGATGGCCACAAAGTCAGGAAAGAAAGGCAAAAAGTCGA
AGAAGCCCATCACTTTTGTGGGCATCCACTCCCGAAGGACGGATCACCTC
AGTTTTGAGCAGGAACTCGGACAAGTACCACTGAAGCCCAGCTACTACCT
CGAAGCCATGGAAATGTATCGGTGA

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