maker-scaffold163_size295297-snap-gene-1.22-mRNA-1, maker-scaffold163_size295297-snap-gene-1.22-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold163_size295297-snap-gene-1.22-mRNA-1
Unique Namemaker-scaffold163_size295297-snap-gene-1.22-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold163_size295297supercontigscaffold163_size295297:169320..175965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PREDICTED: optomotor-blind protein-likemaker-scaffold163_size295297-snap-gene-1.22Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:379maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:379Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:380maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:380Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:381maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:381Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:382maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:382Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:383maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:exon:383Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:three_prime_utrmaker-scaffold163_size295297-snap-gene-1.22-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cdsmaker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cdsmaker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cds-2005504Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cdsmaker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cds-2005505Tigriopus kingsejongensisexon
maker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cdsmaker-scaffold163_size295297-snap-gene-1.22-mRNA-1:cds-2005506Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2005507auto2005507Tigriopus kingsejongensispolypeptide
Tk10080Tk10080Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10080

>Tk10080 ID=Tk10080|Name=Tk10080|organism=Tigriopus kingsejongensis|type=polypeptide|length=566bp
MPPAVCDTMAFHASAALAAASSSPMFPGLMTHPAVSAAASMSMSMSMSSA
SMGSGGFSGLPPPSLAQSYPGLFARGMFGHAMPRLPVPPPEEDDGIKDDP
KVTLEAKELWQSFAQYGTEMVITKTGRQMFPHLKFKVSGLDEKSKYILLL
DVVAADDYRYKFHNSRWVIAGKADPEMPKRMYIHPDSPASGEQWMQKIIS
FHKLKLTNNISDKHGLTILNSMHKYQPRFHLVRANDIMQLPYSTFRTYVF
NETQFIAVTAYQNEKITQLKIDHNPFAKGFRETGHARSQKRRPGSPSQQG
NRLPASYQSLQERIASTSNGEEPIRSSPQRPSQSEPRRAFDVSSLIGEPE
TTSPATPPTPPTSYPSPNLSVGPPPALPPQPVMPPFPHPYLHPGLYQHLA
AAAAGGFNPMLAQLALNPLLSAAYAGNNFTAAAAVDRLRQHRFSPYNPPS
SPPTSHRSSPPSSAFHPIAPKHFDAPRSPPSNGRACSTSPRYISPASSPL
AMKLEPDLPHDNGRSSSPRSERSETALAASLKARVTTSTPSPTASNSDLK
NMEKLINGLKDQQKAS
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mRNA from alignment at scaffold163_size295297:169320..175965-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold163_size295297-snap-gene-1.22-mRNA-1 ID=maker-scaffold163_size295297-snap-gene-1.22-mRNA-1|Name=maker-scaffold163_size295297-snap-gene-1.22-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6646bp|location=Sequence derived from alignment at scaffold163_size295297:169320..175965- (Tigriopus kingsejongensis)
CGCGAGCCCCGGTCCCAGTGCGCCAGGAGGGGGCGCAGTAACGCGGACTG
ACACAACTGGGCGCTGGGGAACCGGGGCCAGAGAGTCCTGTAGAGCAGTG
ATCTTCGCCAGTTTGGGGTCTTGTCTTGGCTCGGGCGTTCTTGATTCCAT
GCCGACTGCAGCAGTGTCAGTTGTTTGCTTGGACCCTTCTGGAGAGGTTG
TATCCATTTCAAAAGCAATTTTCAAAAGGTTTTCCACTTGAGTGAAATTT
CATGAGTGCTCCCTCCCACTGGGGACAGCCGTCACTCACGCCAGCACCTT
CGTCTCACACCACCAGACTCTGAGGACCTTTGCATACATTCATTACCGCA
GATCGACTGTTCTGGGACGACCATCCGGTAATGAGTAAGTGACTATGCCT
CCCGCTGTATGTGATACTATGGCGTTCCATGCTTCTGCCGCTCTCGCTGC
CGCTTCATCGTCGCCCATGTTTCCTGGGCTCATGACACACCCAGCCGTCT
CTGCGGCCGCCTCCATGTCCATGTCCATGTCGATGTCCTCAGCATCCATG
GGCTCGGGGGGGTTCAGCGGACTCCCGCCACCTAGTCTGGCCCAGAGCTA
TCCGGGCCTCTTTGCCCGGGGCATGTTTGGCCACGCCATGCCACGCCTCC
CAGTTCCTCCGCCTGAAGAAGACGACGGCATCAAGGACGATCCCAAAGTG
ACCTTGGAAGCCAAAGAACTCTGGCAAAGCTTTGCACAATATGGCACCGA
AATGGTCATCACCAAAACTGGCAGGTAAGCAAGTGAGCCTCTCCTCTCAG
ATGGTGCTCCAGAAAGTGCATGAGTGTTTTTTGTGTGTGTGGTTGTTGAT
TTTAAAACTGTTTGAGAGCTCAGCAACGCTGCGGTTGACTCTTTCGGTCT
CTCAATGGCTCTTCCTCAGCCGCAATGGATATTAAACATGGTCTGCTTGA
TTAAGGATTGAACCTCCATAGGTATATGAATACCGTAAGAGCTGGGCTAG
TCAATGCATGGCTAAGGGGGGAAAAAGCACGTCACCACGGCTAAAAAATC
CATAGGTAGTCAACTATAACTTATGTAACCTAAAACACAAAATAGCACCC
CTTCACAATGTTAAAGAAATGAACAACAACCGTAACCATGGGGCTAGTTT
TGCTCTGAGCACGATAGGTTGGGGCTCTAAAAAATGTTTCAGACTCAGCC
AGGAATCGGTCGTCGTGCTGGTAACTTCGCTTGTTGATGTTTCAGTAGCG
AGTTCTTGCGTCATTAATCAAAGCCCAGGACAGAGTTGAGCTCTCTGCGA
GGCTCCTGAAAGTCAAACAAAACCCCATGACCATTGGGATGAACTCGGGA
TATTGTCTAGAACACAATGGATATTGGCTTCTGGTAATAGTGTTAGATCT
CCTGCCGATAGATCGTGACTGGAGATACCGATACGCCCGATTGAGTCTCT
CAACCACGACAACCCGACTGGCACTGCCTTCGAGGTATTGGACAAAACAA
ACGGAGGACATTACAATTTATAGAGAATCAGATATTGACTCGCCTCACTT
CTCGTGGTGTCTTGCATTTCCAAGCTAGACTGGGGGAGAAACCAACCCGG
ATATCTCCGTATAAGCTCAAATGGAGATTGCCTCGGAGGGCAATCCGTAT
GGTTTATACCTCCCAGGGGTCACCCCAAACCCACCTCTCAATCCCATTTG
GGCAGCTCCGAGCCAATCCACTCAAGTGTGGAGGAGAGTGGTAGAAAAAT
GTGTTTGTTTTGACTCCAAAGGGTGTAAAATCCATCACTTTGCCCAGCCA
CTCACCAATCGTCTGCTCAGGCGTTCAAAAGCCATTTTTCCAATCAAACC
TGGCTGCTCCTCTGACCCCTTGTGGTTGATGTTTGTAGCCCAGAGCTAGC
TACTACATCCTAGCTGTCGGAATCAATGGGGTTTGTGTTTATCAGAATGG
ATATGGAATAGAGAAGCTCCAAGAAAATGGGAGTTGGCGCCAAGACAACA
CTAGCAAAAATTACCGGACGGAGATCACAACTCTGAGCAAGGATTTTCTG
TCCACTCCCAACTTTGTAACTGGGCTTGCTAGTGGGAAATCAGGATGAAT
CCATTATCTGGTCCCATTGGAACATCCTCTGGCGATTTTTCTGGCAGTGG
AATCCATCATCGATCCATTAGGTCAATCAGAGGAGAGGGACCCCGAGACC
TCGATTGAATTGCTAATTTCCATTTGCTTGGTTGTCTCTCCAAGACTTGA
AGATCCTAGTCCAAGGTGTTGTTGTCCGGCAACCGAAGGCACTAGCAAGG
CGCCTGGAAAATCAGTGCAGAGAATTGCCTGTCTGGATATGATGCTGAGG
TGAAACAAATGAATCGAATTCCTAGACTTTGTTTTCAATGAATGAGGCTG
AACAGTTCAATTAACCCTGGAAAATGAGAAAGGCAGCTCGTGTCCACAGT
TTGGTTGCTTTTGCACCCAGATGATGGTTTCCATCCTCAAGCAATATGTT
CTTGAACAATCGCCATATTTGGCCCGCAATTTGCCCGAGAGAGTCCAATA
GCTCAGCTTTGCATGTCCAGACTCGAGCATCACACAAAGGAGAGGTTGCA
TGAGGTGGTCAAAGGTATATACGTATTTAGGTACAAGGGGAGACTCTCCC
AATGAGCTTGACTCCATAGTTCCCTTTTTGGTCCATTGGTATCGAGAGGA
GTGCGTGTGTCTTGTTTACTGGCCCCAGGAGGAGCTCGCGAGACAAGTTG
TGCGACAAGAATAATCCATTTGTCTGCTGCTCTTCCCCTGTTACGGGTGA
CTGAGCACTGGCCCTCGGGGTGGTCACCCGCTAGTTTGGGTAGTTAGTTA
GAACAGGATGATGATACCCTTTGTCTTAGTGATTGCGCATCTTTGAATAA
CGCCTTCGTGATTTGGGGGGGATTTGAGGGGACGAGCCAAGGACAGAAAC
ACATTATTTGGAGAAGGCGCGACGGTCTCAATTAGCTGACTGGGATTCGT
CGAGACAGTGGTAAATTCTGGTGATTTTCTTGGCACCAGACATCGGGTGA
TTGAATTATTATTACAGGGGTGTCAATTTTCCAATTTCACGCAAACACAT
TGGTGGCTGGCTCGTCTGACCCGGAGTGTAAAGTTCTCACGCCGTAATAT
GTTGGCAATAATGTCCCATGATCACCAGCGAATCGGGAATGTGCCCTTAA
ACAAACATTGGCACTGCCATCTGGTGGCCAAATTGGGGCATCCAACATCC
ATTTCGACCGAGACACCATGATGTACTACTATCCGGGGTGCTGGAAGCCA
AGCCCATTTTCCACTTGGCAGAGCATTGGCCCAAAAAATCTCCTCCAATA
GGGGGCCTGGAGTGGTGTGTGACAGAAAAACACCACCCAACAAGATAAGC
CCACGAATATGGTAATCGAATGAGCTGGGGAAGTGCTCGACATGCACCTA
GGCACCGAGTCCATCCATCTGCTCTTAGATTATTGGGGAGGATTTGGCGC
CGAGGACTAATGAAAATCCTTGATGTTATCAGCGCTCAATCATGGAGCTT
AAGACTCGAGAATCGTACCCACTAGAAAAGATTGTAACACCCAAGCGAAA
GGGGATTTCAGACTTTGTGACAATGTCAATCTTCTCCCACTGAGAGCCTC
CCATCTCCTTTCAGGCAAATGTTCCCTCATCTCAAGTTTAAAGTGTCGGG
TCTGGACGAGAAGTCCAAATACATCCTCCTCCTGGACGTCGTGGCTGCCG
ATGACTATCGATACAAGTTCCATAACAGGTAATTAAAAGACACCTCCAGC
TTTGACATATGATGGTCCAGAGCCTAAGTGACATCATTACCTAATCCATT
CCAGTCGGTGGGTGATTGCTGGAAAGGCTGATCCAGAAATGCCAAAGAGA
ATGTACATCCACCCAGACAGTCCGGCCTCTGGCGAGCAATGGATGCAGAA
GATCATCTCCTTCCACAAGCTCAAACTCACCAACAACATATCAGACAAGC
ACGGATTGGTAAGTGTCTAACGAAATTGGCTCTAACCCCTGGCACTCGCC
AATCAGTTTGTGGTGGTCAACCTCGGGCGCCATTTTTTTCTCTAGGGTGA
CCATAAATAGCGTGTCTTCAATTATCTTGCTTCCAATTTCAGACCATTCT
CAACTCCATGCACAAGTACCAGCCCAGATTTCACCTTGTCAGAGCCAATG
ATATAATGCAACTCCCCTATTCAACCTTCCGAACCTATGTGTTCAACGAG
ACCCAATTCATCGCTGTGACCGCCTACCAAAATGAGAAGATCACCCAACT
CAAAATCGATCACAATCCCTTTGCCAAAGGCTTCAGAGAGACTGGCCATG
CGCGATCCCAGAAACGGTAAGAGAGTGCTGAAATTGGCTTTTTGATTTAT
TCTCACCCCGGACAATTTATGGGATGAAATTGGCCGATAATGAGTAAAGA
GCAGGTTGCACTTGGCAATTGGGGGCCTGTCTCGGCTACTAGTCACCCTG
AACTTCCGCCTCACTCGTGAGACACTTTGGAATGTTGTAATTTACTTTCC
GTTAAATAATGTCATGTTTCGAAGCCAAATCTCTGCTCACTCGCATACAC
ATTTCACCAAGGAGGAAAAAAGTACTTGTCACAGAGTTTACTTTTGCCTT
CATTCCGCTGAATCACACACTTTCGGCGACTCGAGCTGAGGCATGAAGAC
CTCCCTAGTTCGGGGTGAGCAGTTCAATGAGAGCGAATTCTCGGGACATC
TGGGGAGGTGGCTGGAGAAATGACGAAACTGCCCCAAATGTGAGTTTCTC
AGTACTCTGAAGCTTTGATGTGGTTGGAGACGACACTCACAGCAGGCATA
GTTTTGAACAAGTCTGTGGTCGGGTTTTTATCCGTCATCGTCCACTCTGT
TTAAAAGTCTTCGAACTTGTTCGGGATCCACCCCAAGAGACAACTTTGTC
CAATGCCGCCGAGCGTGATGGATGAGGCTCCAAAACAATTGACCAGAGAC
GATACAGAACCACATCACTTGAATTTGAAATCAAACAATGAACACCCAAG
TCTCCCAGGCCCTTGCTGACATGGATAACCCTACATCTGTCTTGGCCACT
CGCTGACATCTGCTCCCTCACCCACAAAACAGAGCTGCCATTCCATATAT
TGATGGCCGAGAACAAAACTCACCTTCCCAGATAGGCTGTCGGCGTCGAG
GCTTGGGCGAGATTGAATCTGGGGCCCACTGATTTGAGACGAATTGCACA
TCTTGGTCGGGAGAGCTAGTGCTCCAGTGAAGAAGATTGCATTTTAGAGG
CCTGAGCCAGTTTCTAGTCGTCTCCCGTTAATTCCACTTGGGTTTAGCGC
TGAATTTTTCGGGCGTTTTCTCAACTTGTCATCGATAAGGGAGTGACATC
ATTAATCATGTCCCCTTTCCCATCTACCGTACACAAGTCTCTTTGGGCTG
GGAGCCGAAGCATAACTGTGTGTGTGTGTGCGCAGACATTGTCGGGGAAA
TAGTGGGGCGTTGGGTTAGGCAGGCACGTCAAGCCGAAAGATGATCAGTT
CGTCCCATGTCCAAATTCAAAGCTCTCATTTATCAGGCCACATGTGTAGG
AGGGGACAATCATGTGGTCAGCCATTATTCACAGCCAACTTCTCTCTCCC
CTATAGGCGACCTGGCTCACCCTCGCAACAAGGCAACCGACTTCCAGCCT
CCTACCAGTCTCTTCAGGAGCGGATCGCATCCACGTCCAACGGTGAGGAG
CCCATTCGGTCCTCACCCCAGCGACCTTCTCAGAGCGAGCCCAGGCGGGC
GTTTGATGTCAGCTCGCTAATTGGGGAGCCGGAGACCACCTCTCCGGCCA
CGCCGCCCACACCCCCCACCTCATACCCTAGTCCCAACTTGAGTGTTGGC
CCGCCCCCAGCTCTACCTCCGCAACCAGTCATGCCCCCCTTTCCCCACCC
CTACCTGCACCCGGGGCTGTACCAGCACCTGGCCGCCGCGGCAGCCGGAG
GCTTCAACCCCATGTTGGCCCAACTAGCCCTCAACCCCCTTCTCTCGGCA
GCCTATGCCGGCAACAACTTCACGGCAGCAGCAGCTGTCGACCGTCTCCG
GCAGCACCGATTCTCACCGTACAACCCGCCCTCCTCGCCGCCCACGTCTC
ATCGCAGCTCCCCGCCTTCGTCGGCCTTCCACCCAATAGCGCCCAAGCAC
TTTGACGCCCCCAGGTCCCCACCCAGCAATGGGCGTGCCTGCTCAACGAG
CCCCAGGTACATCAGTCCCGCTTCATCGCCCCTCGCAATGAAGCTTGAGC
CCGATCTCCCCCACGACAATGGGAGATCAAGCTCACCGAGGTCTGAGAGG
AGCGAAACAGCTCTGGCGGCTTCTTTAAAGGCTCGGGTTACCACGAGCAC
ACCGTCGCCAACCGCATCAAATAGTGACCTAAAGAACATGGAGAAGCTCA
TCAACGGATTAAAGGATCAGCAGAAAGCATCCTAAACATGTCAAAATACT
CTCGTCTGTTCTGAACAAAAAAGTTTAACTCTCGAAAATCCCATTCAGAG
TGCAATCTGCCTCGACCTTTTACTCCACTCTCATGTTCGTATTATACCAT
TGATCAATGTGTGTGTGCATTGCTAGAATATTTATTTGAAATAAAA
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