maker-scaffold175_size286436-snap-gene-1.53-mRNA-1, maker-scaffold175_size286436-snap-gene-1.53-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold175_size286436-snap-gene-1.53-mRNA-1
Unique Namemaker-scaffold175_size286436-snap-gene-1.53-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold175_size286436supercontigscaffold175_size286436:176561..181441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
low quality protein: twitchin-likemaker-scaffold175_size286436-snap-gene-1.53Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:743maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:743Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:744maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:744Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:745maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:745Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:746maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:746Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:747maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:exon:747Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:three_prime_utrmaker-scaffold175_size286436-snap-gene-1.53-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cds-2006484Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cds-2006485Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.53-mRNA-1:cds-2006486Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2006487auto2006487Tigriopus kingsejongensispolypeptide
Tk09301Tk09301Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09301

>Tk09301 ID=Tk09301|Name=Tk09301|organism=Tigriopus kingsejongensis|type=polypeptide|length=474bp
MLRDLTEDKVAELLGLVAEVKHASVPTHDSELSLTHMDHELSAEHGVVAR
GHDAHLDRGAGGRAQGAQVARDERVLELPGHGIQDEHGPQSEHHMLGLLN
DLFQQCGLGGHLEQGLAIRGPRSSQSAALGDAQGGRAEGGRVRVDIATVP
EAKELVEGVLEHVGVDQLGLHGPGRPLLLGPGRVAERDDELDVGEEAGRD
LMAHHHVRNGRLELNGLLGQLGEELLAEEHVLSRLQLLLPMHLGRWEKPL
DDGGRPITHYIIQKKDKFGGWFDALVTDDKACTATIDDLEAKVPGLSEGK
WYQFRVVAANKAGDSPPSSETKPHLCRHKNLRPCIDKGAAGSKSVRVHRS
AIWHIKVKGEPPPQFSWYKNGNKLINSDEFVIATDEYQGGATAMLQVFRS
QMHDAGTYTLVAENRNGSDKIDLDLVVLAQMDDGDCNMFKHGMRGCTCSA
GFRHNELSAQQILTVDFGDPPPSL
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mRNA from alignment at scaffold175_size286436:176561..181441-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold175_size286436-snap-gene-1.53-mRNA-1 ID=maker-scaffold175_size286436-snap-gene-1.53-mRNA-1|Name=maker-scaffold175_size286436-snap-gene-1.53-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4881bp|location=Sequence derived from alignment at scaffold175_size286436:176561..181441- (Tigriopus kingsejongensis)
ATGCTGCGAGATCTGACAGAGGATAAAGTCGCGGAACTCTTGGGGCTCGT
GGCTGAAGTGAAGCACGCGTCCGTCCCGACACACGACAGTGAGTTGTCGC
TCACCCACATGGATCACGAGCTGAGTGCGGAACATGGAGTCGTAGCCCGA
GGTCACGATGCTCACCTTGACCGAGGTGCGGGTGGGCGAGCTCAGGGTGC
CCAAGTGGCACGAGATGAGCGGGTCCTTGAGCTCCCGGGCCATGGTATCC
AGGACGAACATGGTCCTCAGTCGGAGCACCACATGCTGGGCCTGCTGAAT
GATCTGTTCCAACAGTGTGGGCTGGGCGGCCATCTCGAGCAAGGCCTGGC
GATCCGCGGCCCGCGGTCCAGCCAATCGGCGGCGCTTGGAGATGCCCAAG
GGGGCCGAGCTGAGGGCGGGCGCGTCCGGGTTGATATTGCGACTGTGCCG
GAGGCGAAGGAGCTGGTGGAGGGAGTGCTCGAGCACGTGGGAGTGGACCA
ACTGGGACTGCATGGCCCGGGCCGGCCCCTTCTTCTCGGCCCCGGTCGAG
TGGCAGAGCGAGATGATGAGCTGGATGTCGGTGAAGAGGCTGGCCGAGAT
CTGATGGCCCACCACCATGTGCGGAATGGGCGCCTGGAGCTGAATGGCCT
CCTTGGCCAGCTGGGAGAAGAGCTCCTGGCAGAAGAGCACGTTCTGAGCC
GCCTCCAGCTTCTTCTGCCAATGCATCTCGGGCGGGTTGGCGCCGAAGGC
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CTCGGCTCCAAGGGATCCGGATATCATTGATTTCGACAACAAATCTGTCA
CGTTGAAGTGGGAGAAACCTCTAGATGACGGAGGAAGACCCATCACCCAC
TACATCATCCAGAAGAAGGACAAGTTTGGTGGCTGGTTTGATGCCCTTGT
GACTGACGATAAGGCATGCACGGCCACCATTGACGACCTCGAGGCCAAAG
TTCCAGGCCTTAGCGAGGGCAAGTGGTACCAATTCAGAGTGGTGGCAGCC
AACAAAGCCGGAGATTCTCCTCCCAGCAGCGAGACCAAACCTCACCTCTG
CCGGCACAAGAACCGTAAGATTCCTTCGGAGCTTATTTTCTTCAGTATAT
TTTGTTAGCGAGTCCAGAGCTGAGCCATTGCTCCTCGCCATGAAGCCATA
GCTACTGCCAAATGAGCGGTTCCAGAGTCAGATCAGGAACATTAACATAA
ATTGTGCTTTGCAGTTCGCCCGTGCATTGACAAGGGAGCCGCAGGTTCCA
AATCCGTGCGAGTCCACCGTTCAGCCATCTGGCACATCAAGGTCAAAGGT
GAGCCGCCACCCCAGTTCTCGTGGTACAAGAACGGGAACAAACTGATCAA
TTCGGACGAGTTCGTCATCGCCACGGACGAGTATCAGGGGGGAGCCACGG
CCATGTTGCAAGTCTTCCGGTCCCAGGTGAGGTTGAACCACGGATATACA
TACTAAAGTCCCTATATGAATACTTTGTCTTTAATACGTATACTAATCCA
GACGGATTATTCGGCAAAAGTTTCAGGCACGCTCGCAACCTTTCAAGCTT
TTGTGGTCGCGAGGATGTAAACCATCCGGGTCTATGTACTGCTATGGAGT
GGCCTTTCAGGGGGTGGCCAGCGATCCCTGATCAGGCCATTGGGCGGGAA
ATGAGCCCATCGAGCACTTATCCGTGGTGGCTTAGAGTTTCCCTAGAACC
AAACCTGCGAAAGATGCACCTTTATCAAATTGGAAGGCTATACTTATCAG
AACATAGCTTATGGACTGAAAAGCCAGGCCTCCAGAATCGAAAGCGGGCG
ATTTGGAAATATTCCTTCCTTCTATGACACTGAGTGGGTCTCAAAAACTG
TCCAATCAGCGGCCATCCAAAGCCAATGGGTGATAAGATTGACACTCACG
ACCCTGGTTAAGTTAGCTATATAGCAGTACATAAACTCAGTCTCGTTGGC
ATCCCGGCGATCGTGGTCCAGTGCGACCATGGTTGTTCTTTAGGGGTAGG
AGTTTGCCCGATTAGTATACGTATACGTACATACGGTAAAGGGCTGGGCT
GGAGAGCAACCAGTTCGTAGAGGGTGACGGCATTCTGACGGGTTCGTTTC
TCCGCAGATGCACGACGCTGGCACTTACACTTTGGTGGCCGAGAATCGGA
ATGGCTCGGATAAGATCGACCTGGACCTCGTTGTGTTGGCCCAAATGGAC
GATGGGGACTGCAACATGTTCAAACATGGAATGCGGGGATGCACGTGCTC
AGCCGGTTTCAGGTTTGGTCCCGTGTGATTTGACAGAGGGCGCTGTCGCC
AATGGGCTTCTTCCCTTTCCTTTGCAGACATAACGAGTTGAGCGCCCAGC
AAATTCTGACGGTGGACTTTGGCGACCCTCCGCCCAGTCTCTGAGGCCTG
GATGTCTTCCAACCTTTCAAAACTGAACTCATGTTGTCTTCCAAATACCA
CTTGGTCCCATGAGAAATGCTCTTTGTTATTCTGTTGTGTCGCTCTGATT
CCCTTAGTTTGTAAGCCTTTCTACGTTGTCCCGTGCTTTTGAGTATGCAA
ACTGTTCTCATCATGGCTTTAGACAATGCTCGCATTGATTTCATTGTCGC
CAATAAAACGCTTGTGGATTTTCAAGATTTA
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