maker-scaffold175_size286436-snap-gene-1.56-mRNA-1, maker-scaffold175_size286436-snap-gene-1.56-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold175_size286436-snap-gene-1.56-mRNA-1
Unique Namemaker-scaffold175_size286436-snap-gene-1.56-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold175_size286436supercontigscaffold175_size286436:245664..248285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
peptidyl-prolyl cis-trans isomerase fkbp6maker-scaffold175_size286436-snap-gene-1.56Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:738maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:738Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:739maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:739Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:740maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:740Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:741maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:741Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:742maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:exon:742Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:three_prime_utrmaker-scaffold175_size286436-snap-gene-1.56-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:three_prime_utrmaker-scaffold175_size286436-snap-gene-1.56-mRNA-1:three_prime_utr-2013108Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cds-2013110Tigriopus kingsejongensisexon
maker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cdsmaker-scaffold175_size286436-snap-gene-1.56-mRNA-1:cds-2013111Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2013112auto2013112Tigriopus kingsejongensispolypeptide
Tk09300Tk09300Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09300

>Tk09300 ID=Tk09300|Name=Tk09300|organism=Tigriopus kingsejongensis|type=polypeptide|length=424bp
LGIHQYPDHRGSFRLTVIMARHQGSRAPDMDQDPLDFTVDPTQYMDNDLE
ANKIRLHAGIDLQSLVTRGEGAIFEPEVDESLFETSRPEDRNYFMSPDED
FEAKLDRLKMDDTADQEEEEHDFHEKAKKMDQLLDDGGVKKRILFHGLES
EGLPPVNGTVTIHYSMYLENQDEPYDSTVLRGRPEKFKLDDGRLLPGVEL
AVKSMLKRERAEFLIHASYAFGAMGCPPRVPANAEILAKIELLAFYQEAE
AEALLSVDPKERRKLKTFDEIERVAKIEHVEGNILVKAEDWRAAAKRYER
GIQLLEDAELRDEKDELRQKHLLNRLQLNRSHCCLKIGWPKKACIALKKA
LELEPKNAKALYRMGKAKRMLGSLEDAREYLLKAQRLAPLDTTIGQELVS
LDRMVQKERDDEKAMFSRMLKAKE
back to top

mRNA from alignment at scaffold175_size286436:245664..248285-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold175_size286436-snap-gene-1.56-mRNA-1 ID=maker-scaffold175_size286436-snap-gene-1.56-mRNA-1|Name=maker-scaffold175_size286436-snap-gene-1.56-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2622bp|location=Sequence derived from alignment at scaffold175_size286436:245664..248285- (Tigriopus kingsejongensis)
AATCCCGTCAATCCTACTTTGATTCATCACGCTGATTCAGTTGAAATACA
AAGTGATGCGACAGAACGAGTTCGATGGCTTTGAAGTATTGTTAGTTGGT
GGAGAACGGAATTACTATTATTAGCTCGAGAACGGAAAGTAATCTGGGTT
GGGAATCCATCAATATCCGGACCATCGAGGATCTTTTCGGTTAACAGTGA
TCATGGCGAGGCACCAGGGCTCACGGGCTCCGGATATGGACCAAGATCCC
CTGGATTTCACGGTCGATCCCACCCAGTACATGGACAACGACCTGGAGGC
CAACAAGATTCGCCTTCACGCCGGCATCGATCTCCAGTGAGGACACCACT
GACCTTCTCCAATCGATGAATTGATCCCCAATTTGATGTGGCGCTTTGCT
TTAGGAGTCTCGTCACCCGCGGTGAGGGAGCCATTTTTGAGCCCGAAGTG
GACGAGAGCCTCTTCGAGACGAGTCGGCCCGAGGATCGCAATTATTTCAT
GAGTCCCGACGAGGATTTTGAGGCCAAACTGGACCGCCTCAAAATGGACG
ACACTGCCGACCAAGAGGAGGAAGAGCACGACTTTCACGAAAAGGCCAAG
AAAATGGACCAACTGCTCGACGATGGAGGCGTGAAAAAAAGGGTGCGATG
GGATTGGCGTCTTTTCTCTTTCTCTCCATGAAAACTTTGGACGCTACAAT
CAGGGCAGCCTAGCTAAAGAAATCAGTTGGATCCCTTCCAGTTTCTTCTG
TGGTTCATTTCAAGTATATCAAATCAGAGCTACCTCGAACCTCTTCGAGC
TCGTCGTCCATTGCTGCAAGTCTAATGACAGAAATAGGCACTGAGAGAGT
GATACTTGCATAGCAAATTTCAACTGCTGTTGTGGGATGTCATTTTGCTC
CTTGTCAATAAGCCAAATCGAAAGATCTCTCTTTCTTGGACTTTCCAGAG
CTGTTATCCCTTTGTTGGACTTTTTACAGTTATTGTGCCATAATTGGCCG
GATTTTTTTTCATAATGGGCAGGTACAACTACTTGATTGTTCTGAATTGC
TGCGGTCTCCCATTTTGTTCATTTTTTAATTTACATTCGGCCAGGTGAGT
CGTGGTTGTTACTTTTAAAGTGACTCTTCTTGCTCACGTAAAGAAAGCAG
AACATGTTTTCCCTCATGGTCTCTCAACTTACATTCCATCCGCTAGCAAA
ATATTGTCTCGACATTGCTCCTAGATTCTATTTCATGGCCTCGAGTCCGA
AGGCCTCCCGCCCGTGAATGGAACGGTCACGATCCACTATTCAATGTACC
TGGAAAATCAAGATGAGCCGTACGACTCCACCGTCCTCCGAGGTCGTCCG
GAGAAGTTCAAATTGGACGACGGGCGCCTTTTGCCGGGTGTCGAGCTGGC
GGTCAAGTCCATGCTCAAACGCGAGAGGGCCGAGTTCCTCATCCATGCCA
GCTATGCCTTCGGCGCCATGGGCTGTCCTCCGCGAGTGCCGGCGAATGCG
GAAATCCTGGCCAAAATTGAGTTGCTGGCCTTCTATCAGGAGGCCGAGGC
CGAGGCTCTGCTCTCGGTCGACCCCAAAGAGCGGAGGAAGCTCAAGACCT
TCGACGAGATTGAGCGCGTGGCCAAGATTGAACATGTCGAGGGCAATATC
CTGGTCAAGGCCGAGGATTGGCGGGCTGCGGCCAAAAGGTGGGACTTTGA
TCCTCATGAGATGACTAGTTTGAAAGATTGGCTACAATTAACTCGGATAC
ACGTTCGCTTTCAGGTACGAAAGAGGCATCCAATTACTGGAGGACGCCGA
GCTCCGGGATGAGAAGGACGAGCTGAGGCAGAAGCATCTCCTGAATCGAC
TCCAACTCAACCGCTCCCACTGCTGCCTCAAGATTGGCTGGCCCAAAAAG
GCGTGTATCGCCCTCAAAAAGGCTCTGGAGCTGGAACCCAAGAACGCCAA
GGCTCTCTACCGGATGGGCAAGGCCAAGCGCATGCTCGGCAGCCTTGAAG
ACGCCCGCGAGTACTTGCTCAAAGCCCAACGCCTGGCGCCCTTGGACACG
ACCATTGGCCAGGAGCTGGTCAGCCTGGACCGGATGGTTCAGAAGGAGCG
AGACGACGAAAAAGCCATGTTCTCCCGAATGCTGAAGGCGAAAGAATAAG
ATGGTTGTGAAATGGATCTGAACAGAAGGCTTGGGGCGTCGGCGTATTTC
TTTAGCCAGACTATCGGATGAGCCTGTCGGACCTCCACGAGCTGAAACTC
TCTCGGAAGGCAACTATCTGTCCCAAATCCCCTCGCGCATTGGTTAGAAG
GTAAACAATGGAACCCCGTCCATTTTTTGAACCATGTGGTGTCTAGTTTG
TCTACCAACTTTGCCAGATTACGTGCAATTCGAGGACACCCGAGTGGCAA
TTGCTGCTGAATTCAAAAATCGGGAATGGACATCCGGGCCTGGCTAATGT
CGGATCTTGTTAATATATCAGTATCGCAACCTCAAATTGGCGATGGTTGC
CTCGGAACTAGCCTTTAGCGAGAATATGCCCCCTTTCAGAAAATCCCTGG
CGATTAGCGATAATGGCAACACTTTAACCTAACGACATCAGTCCACGACG
CCGACGAGGCTTGGCGATTCCT
back to top
Add to Basket