maker-scaffold182_size278544-snap-gene-0.11-mRNA-1, maker-scaffold182_size278544-snap-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold182_size278544-snap-gene-0.11-mRNA-1
Unique Namemaker-scaffold182_size278544-snap-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold182_size278544supercontigscaffold182_size278544:9175..15648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
af154555_1paired domain transcription factor variant amaker-scaffold182_size278544-snap-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:31maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:31Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:32maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:32Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:33maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:33Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:34maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:34Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:35maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:35Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:36maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:36Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:37maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:exon:37Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958512Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958515Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958516Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958517Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958518Tigriopus kingsejongensisexon
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cdsmaker-scaffold182_size278544-snap-gene-0.11-mRNA-1:cds-1958519Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1958521auto1958521Tigriopus kingsejongensispolypeptide
Tk04802Tk04802Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04802

>Tk04802 ID=Tk04802|Name=Tk04802|organism=Tigriopus kingsejongensis|type=polypeptide|length=279bp
LGGVFVSGRPLPDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGAR
PCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIR
QYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSS
GNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCY
GHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETR
VQVWFSNRRAKWRRQEKMRQNSKLAKDRK
back to top

mRNA from alignment at scaffold182_size278544:9175..15648-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold182_size278544-snap-gene-0.11-mRNA-1 ID=maker-scaffold182_size278544-snap-gene-0.11-mRNA-1|Name=maker-scaffold182_size278544-snap-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6474bp|location=Sequence derived from alignment at scaffold182_size278544:9175..15648- (Tigriopus kingsejongensis)
GCCATTCCGGAGTCAATCAATTGGGCGGAGTCTTCGTTTCAGGTCGGCCT
CTGCCCGATACAACGCGTCAGAAGATCGTGGAACTGGCTCATTCGGGAGC
CNATTTGCACCCTTTTGTCACAAAATAAATATGCATCCTTTGACAAGGCT
TTGCTTCAGCGCTCACATTTTTCAAATTGTTCAATAATTTCAGAAAATAA
GGTTTCTCCCAATTTGAACTTTTCCGTTACCCACCCGGTAACGTTAGCTG
CAACAATGCAAATCCTGGGCCTGATGAAACAACTGCATTAATTTGCTTTA
CATTGTGCATCCAACCTTTAGGTATATCGGGTTGATGCGGACAAATGCGT
ATCCACGATACCAGTCTTCTCTGCCCTTGAGAGGCTTTTTGGGGTTATGG
ATACCAATACAGTATTATTAATATGGAATTATTATTCTCTGTTCGGTATA
GTTTTGTCAATATTCATGGTCTGGTTAAGTTTCGTTATTATTTATTGAGT
ATTGTTTAATTCTGTACACATCTATTTATACTGTACCGGTATTGGCTAGT
AAATATTTATTGCGCTTACCCATTATTCTATTGTTTTGTTTTGTATAGTT
TGCTGTAATGTTGTTATGTTTCTCTAGTTATCTTTGTTTTTCTAAACTAC
TTAATATGTATACTATATTCTTATAATTTTCCTTAAAACTATTGACTAGC
ATTAGTTTGCTAAGCGTTGACTCCCGGGTGTAAACCTATGTTAAATATGT
AGGGAATAAACGATTACACTGCCCCAAAGGGGCCACAGCCTGACCTGAAC
AAAATATCCACGGCCCCAGGCTTCAGATGTTTCTCCAAATTCCCCTTATG
AATTCCTCTTACCATTAACTGGATTCGATTTCTGGCCGGGTCCTCCCTTC
AATGTGTCAAGATCCTTTGTGGTACACTCACGACTGATATCAGTTATAAT
TGAACCTAGAAATTTCAAGTCCATCCGCTCAGTACCGGAACCTGGTAGTG
CCATCGTCGGACGGAACAATCGGTTCAAAAAACTAACCGAACACACAGCC
TTAGACCTGGATAGAAAATTTAAGATCTCATAGAACAAGCAAAAAGCTTA
CATTTATTGCACAATTATGCCTTAAAGCAATAGGTTTGAATCATACAATC
TCGTTTGATAGCTCCTTGCTCCATTTTAGGCCATTCCGGAGTCAATCAAT
TGGGCGGAGTCTTCGTTTCAGGTCGGCCTCTGCCCGATACAACGCGTCAG
AAGATCGTGGAACTGGCTCATTCGGGAGCCAGACCTTGTGATATATCGCG
AATACTTCAAGTATCCAATGGCTGCGTGTCCAAAATCCTGGGCAGGTAAT
CGCTTCCGTTCACTCTATTGTTAAATATGGAATTATATAATTTACAATGT
ACATTATTTACAAATTATTAGGGTTCACTTTGGATGTTCTATCCTGATGT
TTATCAGAACGTCCCGATTTCAACTAACAGTCCACCTAACACTTCCAGAT
ACTATGAAACTGGGTCCATTCGACCCAAAGCCATCGGTGGTTCCAAGCCC
AGGGTGGCCACTAATAACGTTGTGGATCAAATACGTCAGTATAAAAGAGA
GTGTCCATCGATTTTTGCCTGGGAAATCCGGGATAAATTGCTTCAAGACA
AAGTGTGCCCCCATGACTCCGTACCCAGTGTGAGTTTATAAACTTATACA
CCTTTGAATACCCTTTATATGGTCTGATTGGCTCCTTAGTTTCATTTGTT
TCGTTTAGTTCTTCCATTGGTTCAGCATTTACGTTGTACAATAATCCACA
TTTTTTGCTCTCAAATCACTCCAAATACTTATTTTGTGGGTACCCGGACT
TACCTGAAACAACATCATTTGACCGACCGAGAGTCGGCATAATTGGCAAA
ATAGTTCAGACTTAAAACATATCCATGGTCCCAGAAATGTATTACACCGA
CTGCTTGTTTCATCCACCGGAACAAAACTTAAACATCAATTATTTTGATC
TGTTTCTTATGAGATATATGGTTATTAGTCAACCGTTAGCTAAGTTCAGT
TAGTAGAAAGTCATATTTCTGGGATAGAAAGTATGGAGAAATAGAGGGAA
CTAGGGCATTGGATCCAATGTCCGAGGTCAACTTCTGTCAATCTCGATCA
TTCTTAAAAGCTATATCTGAAAGGAATTTAAAAAACAAAACACTAAATAT
GGCATCCAATACAATCAGACTTTCTGCTTGCTGCGATTTCTCATTCTCGT
ACATAGCCTTGAAGTACTAACCTCCTTGAACCAGATTATATACTTATTAG
GTCACTTTGGAACCTATGTTTATAGGGCAACTAAAGTATATGGGCAGGAT
ATGTCGTTAAGAGCACGGTGAATGCCTCTGTGTATTCCGAGGAAAGCAGC
GTAGCGCAGGGGATCGTTGGTTCGATCCCGGCCTAGCCAAGTTCAGTCAA
TAGACACCTGTATTGTTTGCTTCTCTTTGTGGGATTAAAGTGGGCGTACC
CCTGGGTATTCCTCGAGGGTCAGGTAATCATTCAAGATCAATTTGTCCAC
CAGGCTGACTATGTCTCCTCAGAGATTTCCCTAGATGGGCAGAAATGGCC
GAATCATTCTAAACAAACAAACATACAAAACAAGCCTCTGTGTTTTATTC
ATTATTTCGACCTTGAGATGGTTGTTGTGCTCAATCCTTCCGTTGGACTT
GTAGGATACATTTGGTATGGTTTATCGGCCGAGGCTGAGAATCGTGGAAC
TCCTTACTTGTACAACAGTGTACATACAGTACATAATACCGTAGTTCAGA
GACGATACATATTGCTTCCCTCGTCCGAAACACCTGAAATACTTGCAATA
CTGTACATACCGTATACGTATGTACACCTGGATCTCATTGAACATTAATT
GGTTCATGAATTCTTTCAAATGTGTCCATTCCCTGGGTTTTAGGTGTCTT
CCATCAATCGCGTTCTGCGTAATATATGCGGTCGAGGTGACTCATCTTCA
GGGAATGGTTGGATCCAAGGCAATGATGAACACAGGTAGGCTTACAAATC
GCAGTTTCACATTAAAAAAATCCATGCCATTACTCGAATAATCAAATGAT
TGGTCTTGCGAACTCTACCCCCTACCTCGAACTGCATACCACAGAGCCTG
TCAATCTCATGCGAGAAATCTCTGAAACATATCGTAAACTCGTTTTGTGT
CTGATTTCAGTAACTCTGGATCCGAATCGCATTGGCCTTCAGAATCGAGT
AATGAGAACTTTCACGGGATTCATCAGTTTCCTCCTGCCGGACTACCATT
ACGTAAGTTTAATGGAAACATTATACTACTGTACATGGCGACTGTTTTTC
CTTCGTAACTTTGTATCTTGGTATCTACATGTTTGTATTGTATGTTAAGC
CTTCCCACTAGCTATGCCAAAGAACAACAGTGAAAATGCACAAGCGTTCA
ACGGGTGGTAAAACAGTCATTTTTTATATTAATGACTTCAGGGATAAATC
CGATTCGGTATTAATTTTTTCCTTTACCACTACCTACACTATGTCTATTA
AACCACAAGTATACGGCCATATCGCACTGAACGGTACTTAGAGTGTACTG
CACGTGTTTGATGTGATTGTTCAAAATGGGCGAATCCGTCAGACTCAAAG
TCTTGCATTTGAGATCACTATTCTGCATTAGCCGCGAGGATCTTGTGGCT
GAAATGGCGGATTTCAAAACCTATACAAGCAATAAGCATTTAAAAAAATA
AACAACCCTGTTTTAGCTCAAACACATGTATTATTAGGACATGCGCCTTT
TCAAGCCACACCTTTGTATGCTCATTCCCGCATACTCTACATCCACAGCT
CTTTCGTGAATAACTGATGCCATGACTAGGCAACTTTAAGGCAGTCACCA
GACAATGAGGAAGAGCATCCCTCTGTGTGCGTTCGTCCGAACTAGTGATT
CCATTATCACTAACCGGTATTTGCTAATTGTCGAAGATTTAGTAAATTAT
CGGTATTCGATAATTTTGATGCATCTATAGATCATTTCGAGATTGCGTTA
TTTACAAAAAAAAGCAACCTCTCATTGACATTTTTCAGTTTTCATCTGAT
ATTTTACAAGTTTTTCCATATTCTTCAAGGTTTTTTGAGTTCGATCCTTC
TAAATTTCAGATTGCCCAAATTATTTTTGATCTTTTCGTTATATCTCACT
TTAAGTCCATATTACATGTAGTTTGTTTTTGGGAAGGCTATTTCCGCCCA
AGTTTTCATTTCTCTAATGATTTTTGGCAAATTAACTTCCATGAATTTTA
CAAGTTTCTCAAGATTCTCTATATAAGCAGATTATAGCAAAATAAAATGT
GTTACATATTCATCCATTTTTTTCACGGCTGTCTTAGTCACAATTAGTCA
AGTTTTGGGCCATTTTCCATCGTTTTTTTCGTGGCCTACCTACCAATTAA
ACCATACTCTTTTCGCTGTAAACTTCTTATGTCCTTTTTTTATTTATGAA
CACTGAAGGGAATCTACCCGAGGAGATGCTGAAAGACTCATGATGATGAT
GTGACTGACTAGTTTATTGAGTTACATATATATATAGGTAAATATAGGTC
GTGGAGTCATCTCTCAACAAACACTACATGTAGCCCATTTTTTTACAAAA
TCTTCTGTAGTCGACGAACTATGGCTAATTTTTCTAAGAATTATCGACAA
TCGCCAATATAAATTCGAGATGATTTTGAAAGCACTAGTCCGAACCCCGC
ATTGTGTCAATCTATTAGCCAATGGCTCTTTTGGGAACGAAGTTTTACCC
GAAGTTTACGCCTCATGGAAAAAATCCCCAATTTGAACATCAGCCGCGTA
GTGCGTTAACCAAGTGCACATGTATGTACACTGCACTGTACTACGTACAT
ACTAGGTCTCCATAGCTTTGTGGTCGGCGCTATGTCTTATCAGTTTTCCG
CACGAAGGCTCTTGAGTGACATAAACGAGACGGCAAATGGAAACCCAAAG
AGGAGTGTTGAGTTCTGAGATCCGAGGAGATCCCCTCTCGACTCGCCGTG
GTCCCAGAGAGAGAAAGCGAGAGCGAGCGTCTCGCACGCGTCGAGGAGCC
AAAGTGGACTCCAACGAGGGGAGTTTGGCGCAGATCTTTTCTTCTCCTGC
CTGTTTAGAGTCGCTTTTTGTGCGGCCAGGTTAGAAGCCTTGTCAAAGAG
GTAATGAGGTGTAAACCCAAGGGAGCGTGTCGTATGACCGAATCTCTGGT
TTCCAATACCTTCCTGGGGATAGGGTTGAGGGTGTTAGTTTGGTTGCCAG
GAATAAGAAGCACTAATGCCCAACCTATGTTCTCTTCCAACAGACAATGA
GGGCCTCTCCTGCTACGGCCATGCCAAACGCAAGTTCCAGCGCAATCGAA
CGTCCTTTGCAAATGACCAGGTGGAAGTCCTGGAGCGAGGTGAGTAATAA
CTAGGGGCTGGAAATGAGATTTCCAGCCGAAAAGAATTATTGAGCTATTT
ATTTAGAGGTTTAGAAAAAAGTAAAACAATAGCCCTAAATGTGGCTCACC
GATAAAAAATAGAGCGTATTCAGATCAGTTCCCCGATCATAACCTTTTAT
ACAATTCAAGAATATTTTATTTTTGTGGTACACACTTGAGTGGAATCGTA
ATAAATAGCAATAATGCCTTTTTCCTCTACGTACATGTTAATTACGGTTA
ACTTATCCTGGTTGGCCAGAGAGTAGTATGCAATTGGGAGGAAAAGCAAA
GGAATTCAGAACTACCGTAAACTAGTACTTCCTACCTTTACCCCCATAAC
TCTATCCGCACTGAGCTGAGGGCCGGGGTTCGAACCCTGCGCTTCCAAGT
TCATAGCAAGTGGTGCTGTTGAAGTACTCGTACAACCACTCTTTTTCATC
CCTCGCGGAATTAAATGGTGAAATTGTTCGGACTTCTGGTCATTCCACGA
CGTTACGAGTAAGTTTATAATGCAATATGAATTGGTAGAGCTGGCAGCCA
TTCTCTCGAAAGAGATTACCTCGCTGGAAAGGCCTTCCAACAAAAGCCAA
TCCACTCAATTATCAATGGCTGGAAGCGTAGAAATCAAAGCTTTATACCA
ATTTCTTGACTGAAATCCATTTTGGTCTCGCACTTGCGGATTTGTGAAGA
ATTGGCTTGAAGTATACATCTGTTTGTATTGTTTTCCTAAGACACAGAGT
GTGCACATCTCGTGCAATCACCAAGAACACAATATAAGCTCGGGATGGTG
GATAATCATAACCATTAGCCAGACCGAATAGTGATTACCATCGACTGGTT
CTGGTTGCAGAGTTTGAAAAGTCCCATTACCCGGATCTCTATCTCCGAGA
GCGATTGGCGTCTCTCATTTCTGTGCCCGAAACTAGGGTTCAGGTTTGGT
TCTCCAATCGGCGGGCTAAATGGCGGAGACAAGAGAAAATGAGACAAAAC
TCCAAACTGGCGAAGGATCGCAAA
back to top
Add to Basket