maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1, maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1
Unique Namemaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1959_size23944supercontigscaffold1959_size23944:11939..17030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
wd repeat and hmg-box dna-binding protein 1maker-scaffold1959_size23944-snap-gene-0.6Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:829maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:829Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:830maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:830Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:831maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:831Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:832maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:832Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:833maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:exon:833Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:five_prime_utrmaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cds-1960316Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cds-1960317Tigriopus kingsejongensisexon
maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1959_size23944-snap-gene-0.6-mRNA-1:cds-1960318Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1960320auto1960320Tigriopus kingsejongensispolypeptide
Tk11218Tk11218Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11218

>Tk11218 ID=Tk11218|Name=Tk11218|organism=Tigriopus kingsejongensis|type=polypeptide|length=1031bp
MSSAAPRGSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGI
DDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITR
FTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVA
LDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPG
VVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVA
WAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYE
LAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAA
LMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDA
PPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCF
NNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDP
RASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRI
FSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDL
RKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGF
GACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPP
TVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLAEVEETQSR
CLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRIS
KLANDALQEEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPI
LEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT
VFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAK
DNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKK
EDKDQYRSPRVPKRKSEDELTASPASKLLKV
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mRNA from alignment at scaffold1959_size23944:11939..17030+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1 ID=maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1|Name=maker-scaffold1959_size23944-snap-gene-0.6-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5092bp|location=Sequence derived from alignment at scaffold1959_size23944:11939..17030+ (Tigriopus kingsejongensis)
AGCCTTTCGCCACCCGCATTATGAGCTCGGCGGCCCCGCGTGGATCGGCC
ACCTTGAGCGCCATGCGCTTTGCTCACACCGAAGGCCGCTCCAGCCTGCG
CTACACGCCGGATGGCTCCACCGTGGTCACCTGTGGCTCCGACGGCGAGG
TAAGTCCGCAGCCACGGGTGGCGGCTAGCCCGCCCCAAGGCCGAACGCTC
AAATTCGCCCAGGGCGGGCTAAGGGAAAAGGTTCTGTAGCCGCTCGAGGC
GACCCCACGACACAAATAGAGCAGTGTATAGGGAGTGTGTGTGTAGTCGA
AGTTTATTGGCGTTCAACGCATTAGCCAGTCTGCTAGTTAATGCTGTGTT
GACATGACAATCGCTGTGATAATTTAAAAATGGCCACTGCAATTGGGACT
AGATGGGGGCATCTTTGGCCATTGAGGTGGCAGCCTTCCTCATTTTTTGC
ACTCCTGAGTGTTTGTGTGTAATCACACCTTCCGGTGGTTTCGTGTTCCA
ATGGAACCCCCATGGTGAACACAGGGCCCACTGATGTTATTAGCTAATTT
AACTAGTCGCCGTGCAGCCCCGTACAATCCAGCTCCAACCACTACTTTAA
TCAACCGGAAACCAGAAGGGACCCTTCCTCAAGATGTGGCCGCACCTGTT
TTTCCTGACTCTGAACGTCTAAGGTTACAGGGAGTCGTCATTCACTCCCC
TCAGTCGAAGAAAGTCTGGCGTGGCGAAAATTTCTTTATCCGCCGGGCCC
GGGAATCGATCTGCGGCTTTCCAGCACTTTCCTCGACCACTTCCCTATTC
AATATCCATAGGTGGCCGAGAAACCCTAAAAATCGTTCGTGATGACCACC
TACGCCCAATTGGCAACAACAAATGCTCGAGTGTTTAATTAAGCTTTCAA
CTGGCTTTGCAATAAAAAAAAAAGCCAGACCCATTCCCATACAATACTGA
ATCTATTCAAATACTGCCGCATCCATTGGCCATGGATATTTTCACCCCAA
AGCCCGCCCCCCCCCGCATTTCGGATAAGCGTCCCGTTCACTGCCCGAAT
GACTTATTCCCAGACGACTACCCAATTCAATGGAGCCTGCCCTGGGACAC
TTTTTTCACAACCCTAGCCACTGAGTCTCACTCATGGGATTTGGAGCGTG
TGCGAGTATTCATGGAGTCAAGTCAGCCCATCAGTCTTAACAGCCTTAAC
ATTCAACCCACTGACCCGAGCATGTCCACTTCCAGAGCGAATCTGTGAAT
CACTAAGAGCAGAATGGGCGCTCTACAATCACGACATTTCGTCCAATTGC
CGGACATCCGGGAGGCCAACTCAATCCACAACTCGGGAACAATGTTGGAA
GTAGACCCATCAATTTCCATTGCAGGTCCGACTCTACCAGGGGATCGACG
ATGACGACCCCATTTCCCACTTGGCCGGTGACGAGACTCTGGCCGTGGCC
GTGACGGATGAGCGCTTTTTCGTGGCCGCATCCGGCACCAACACCATCCA
GGGCTATTCCTTGGCGGAGGGCCAGTCCGAGGGCGTCATCACCCGCTTCA
CGGCCGACGGCACGGCATTGGCCGTGAGCGGGGATGGGCGATATCTCTTG
GCCGGCTCGGACGACATGACCGTGAAGCTGGTGGACACCCAGACCTACAA
GGATCACGTGTTCCGAGGGCACGAGGCCCCCATTCTGAGTGTGGCCCTGG
ACCCGAGGGAGAGCGAGCCTGAGTTCGCCGTCTCGTCCTCGTGCGATGGG
ACCGTGCGGATTTGGAACATTGCCGGCGAGAACGAGATCCAGTGCGTGGA
CGGGCTGGCCAAGGCCAACGATCTGTCCACGGCCAAGAGCCCGGGAGTGG
TGGCCTTGCATCCGAAGGGCAAGTACCTGGCCATCCCCATGGAGAGCAGT
GTAGTGATCTACGCCCAAGAGGACGGTTGGACCAAGGTCTGGACGCGCCT
GAGTGCGCCCAATCCGCCCAAGGACGAGATCATGGGAGTGGTGGCCTGGG
CCAAGGATGGCGACTTCTTGGCCTCGGCCACCTCGACCGGGCGGATCTTC
ATTTGGGATTTCTACGACAAGTCCCTGGCCTTCGAGACCAAGACCACACG
CGGCTACGGGATCTGCGATCTGGCCTGGCACCCGAGCAAGTACGAGCTGG
CCATCATGGACAGCCAAGGCTACTGGGGCCTGATTGACAAGATGACCTTC
GTCGAGGACAACGAGGAACAAGACGTGGAGGAGGAAGAAGACGTCACTAA
AACGACTCACGACGAGGGCGACCTCGACGCCGATCAACTGGCGGCCCTCA
TGGAGGTAAAAAACCCACTGGATCCCACGAAGAGCGCAATGATTGTTTAT
AGGGGGAATCTACCAATCATTTGATGTGTTGTTTTTTGGCCATTTCGAGC
AGGGGGAAATGATCACATTTGACAGCAGTGCGGGTCAGTGGTTCAGACCC
ACTCAGACTGGGTTTCGAACCGACCACTTGGTTCGTCAATTGCAATTTCT
TGCACTACTTGAAAACGTGCGATTTTTCCCATTTTTGATTGCATACTTCG
GTGTTTTTTCCCCCATATTTTGAACTTCCCCAGTTTTGCTGTTTTGAACT
TCCCCAGTTTTGCTGATGCTAAAGATGTAGCTCCGTTTCAGGATGACGAC
GACAACGAAAACTCCTTCTCAATCCGGAAGATCAAGCGGGACACGGGATT
CCTGTCCGAGGACGACAGCAACATGTCCAAGCCTCACTTCCGGGGCGAGG
ACCAGGAGCGTGGAGTCGAGCCCGTGGATGCCCCACCCACCTCTGGCCTC
CTCGCGCCCGTTTTGGGCGGGGATCCTCACTACCAGGTGGACATTCAGCC
GCCCTTCCAACCCACGGCCACGCCCACGCGCCTCTCGTCCCGCTTCATGG
CGTGGAACTCGGTGGGCGTGGTCAAGTGCTTCAACAACAACGAGGAGAAC
TCCATCGAGGTGGAATTCCACGACACGGCCATTCATCACTCGTTCCACAT
CACCAACGCGCACAATCACTCCATGGCGGACTTGAGCCGCTCCTGCCTCG
TGCTCGCCAGCGAGATAGCCGAGGATGACCCGAGGGCGAGTCGAATCACC
TGCCGGCTCCTGGCCTCCTCCGACCTCAGCCCCGAGTGGTCGATCGAGAT
GCCACCCAAGGAGGAGGTACTGGCCATCTGCTGCGGTCGGGACTGGCTGG
CTGCGGCCACGGATCGACGCCTGCTCCGCATCTTCTCCTCGGGCGGGAAC
CAGTGGGAGATCCTCGCCCTCCCCGGTCCCATTCTAGCCCTGGCCGGCCA
CGAGAACTGGCTCATGGTCACGTGTCACACGGGCATGGCTCTGCCCGGCT
CCCCCTCCGTGTCCTTCGCCGTCTTCGATCTGCGGAAATCCGGACGGCGC
CACCCGGCGGGGAGTTTCACGCCGCTGCCCTTTGCGCCCAATACCGAGCT
GGTCTGGATTGGCTTCTCGGACGAGGGCACGCCGGGCATGATGGATAGTG
CGGGCCAGGTGCGGCTGCTCCACTCCGGCTTCGGAGCGTGCTGGACGCAG
ATCTGCGACACTCGGAGCGGCTTGAAGACCAAGAGCGACCATCACTTCCT
CGTGGGGATTAGCGAGCAGGAGCATCAGGTGCGAACCATCCTCTGCAAGG
GAGCCACCTATCCGGGCACCACGCCCCCGCCCACTGTTGCTCTCGTCCCA
TTCGCCCTCCCCCTCTGCGAGGCAGCCACGGAGAAAGGCGTGCTCGAGGA
GGAGCTCTGGAAGTGCAACCTGCTCAGCCGGGCCCTGAGAGGCAGCGAGC
CCCTGGCTGAAGTGGAGGAGACGCAGAGCCGCTGCCTCATCAAGCTCTTC
GCCCTGGCCATGAAGAACGACCACGAGACGAGAGCCCTGGAGATCTGCAA
GCTCATGGACGCGGCCACGATTGGACTGGCCATTCGCTACGCCTCCTCCA
ATCGGAGGATGCAGTTGGCTCAGCGGATATCCAAGTTGGCCAACGACGCC
CTCCAGGAGGAGCAGGAGCAGCAACGGGCTCAAAGTCAAATGAGTCACGC
CGACATGTTCGAGGATCAGGGCGGCGACGAGCAGGCAGAGGAGGAGGAGG
AGGACGACACCAACGCCCCGTCCAATCCCATTCTGGAGGCCAAGATGAAG
CGGAACCTCCTCGGCAGCGGCGGCCGGAGTCGAACCATCATCCCGGACAG
TCAGGGTGATGCGGGCCGCAATCCCTTTGCTCGCAAGTCAGTGCCCAACA
CGCCCAGGTGAGCCCAAGTTAATCCTTTTAACCGAGGAAGAGTGCCAAGC
CACGATCTGGGTTTGGGAATGTCCTAGCTCAGTAGCTCAAGTCGGTCGGC
TTTGAGCAGCCTCAAGTCGGTCAGCTTGAAATCCCTGCAAGGAATCGGAA
GTTGAGCGAGCTCGGCTAATGGACGGATTCCCTGCCGATGCTAGTCAAAA
ATGGTCAATTGCAAAGTTTCCAAACAAAATGATCGTCACAGCAATTGATC
AGCCCAATTATTTCCAGTGGTGCAATACGGAAGGGGGACACGGTGTTCGA
CGACATGACGCTCAAATCCCAGTCCAGTCGGAATCGCGGCTCATTCGGGG
ACCGCAAGTTCAAGCCGGGTACCGGGATCAAGGTCAAGCCCGCCTTTGGC
AAGCAGAGCACCATCGTCCTCAAGAAAACCGTGCCAGCCAAAGACAATGG
CGCTCAAGCGCTCTCGCCACTCTCCGGATTTCAACTATGGTTGGCGGAAA
ACCGCGGCCAAGTGGCCGCAATTTGCGACTCCGGCACCGAGGACTCGGCC
ATCAACATCAAGGGCCTCGAGGTGAGATCTTCGGATCTATTGTGGTTCTA
AGCTAGTCCTTAATAATACTGAGTGCACTCCTCTTGCAGATGTGGAAGCA
ATTGAAGAAGGAGGACAAGGATCAGTACAGGTCGCCCAGAGTGCCCAAGC
GCAAGAGCGAGGACGAGCTGACGGCGAGTCCGGCCTCCAAGCTCCTCAAG
GTGTAACCCCACCTCGAAGGGTGTTCCCTAGACTACTTATTCATCATATG
TTCGTGTGTTTTTATAGCAATTTGACTTAGTAGTGTAAGAAG
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