maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1, maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1_size3401120-snap-gene-32.25-mRNA-1
Unique Namemaker-scaffold1_size3401120-snap-gene-32.25-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:3260751..3263945 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
homogentisate -dioxygenasemaker-scaffold1_size3401120-snap-gene-32.25Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1168maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1168Tigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1169maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1169Tigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1170maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:exon:1170Tigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:five_prime_utrmaker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:cdsmaker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:cdsmaker-scaffold1_size3401120-snap-gene-32.25-mRNA-1:cds-2021977Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021978auto2021978Tigriopus kingsejongensispolypeptide
Tk04947Tk04947Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04947

>Tk04947 ID=Tk04947|Name=Tk04947|organism=Tigriopus kingsejongensis|type=polypeptide|length=934bp
MPGFGNDYETEALPGALPQGMNSPQKCNYGLYGEQLSGTAFTAPSHQNER
TWCYRIRPSVKHSHRYQKIDVPFWKSAPHIPEDVSSLGQYRWDPVPHSAE
ETNWVTGMRTMTTAGDVNTQVGMASHVYLVSNSMVDEYFFSADSEMLVVP
QQGQLRFVTELGIIDLKPQEIAIIPRGLLYRVEVIEGPCRGFVCENYGQK
FELPGRGPIGANCMANRRDFKAPVAAFEDREVPSTVIIKWCGQFHETHIG
HSPLDVVAWHGNYTPVKYDLTTYCPVGAILFDHPDPSIFTVLTAPSGQPG
TANIDFALFRERWMVAEDTFRPPWYHKNIMTEMMGNIYGQYDAKPDGFAP
GGISLHNMMLPHGPDKKAFEGASNSDLQPEKLDNTMSFMFETRFPQHLTR
YAGIDAPLQDNYIDCWSDIDKKFDGTPVRAALNLKGLSYETLSVDLVAGD
QRATDYKELNPGAGVPTLVLDDGTVLTQSMAILEYIDATWPEPRIIPQDP
LQRARVMAAAHTVAMDIHPVNNLRLIASANNGDTPFPLNNLPYGVFSTAS
LDKRCGVAIGDQILDMEAAEAAGLVDTQNTLSCADWGDFMELGAQQWSAL
RGRLMAFLAEGSADQAALEPLLVAQADAQLHMPFAVREYTDFYAGMQHAK
NMGAILRGSPDLPANWLHIPIGYNGRASSVVVSGTDIHRPNGQSKAPDAE
MPSFGPTKRLDIELEMGAIVGGSNKLGQPITVDEADAMIFGYVLLNDWSA
RDIQGWEYQPLGPFQGKAFGTSISPWIVTAAALESFRAPTPAREKTLLPY
LDGSKDGLYNIELEVLMQPEGAASATSLSKTNYSRMYYSAAEQLCHHAIG
GCAMNSGDLLGSGTISGPSKDEYGSLMEVSWAGREPFTLDTGETRGFIED
NDTLTLRGHAQGDGFRIGFGDCVGKILPAVQWPK
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mRNA from alignment at scaffold1_size3401120:3260751..3263945+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1 ID=maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1|Name=maker-scaffold1_size3401120-snap-gene-32.25-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3195bp|location=Sequence derived from alignment at scaffold1_size3401120:3260751..3263945+ (Tigriopus kingsejongensis)
GCCCACACGAAGGTTACATGCCGGGTTTTGGCAACGACTATGAGACAGAA
GCGCTGCCTGGCGCACTGCCGCAGGGCATGAACAGCCCGCAGAAGTGTAA
TTACGGCTTATACGGAGAGCAGCTCTCTGGCACCGCCTTTACCGCACCCA
GCCATCAGAACGAGCGCACCTGGTGCTACCGCATTCGTCCCTCGGTAAAG
CATTCACACCGCTATCAGAAGATTGACGTGCCGTTCTGGAAGTCTGCACC
GCATATTCCTGAAGATGTCAGCTCACTCGGCCAATACCGCTGGGACCCTG
TACCGCACTCAGCCGAAGAAACGAATTGGGTCACGGGCATGCGCACCATG
ACCACGGCCGGTGATGTGAATACGCAAGTGGGTATGGCCAGCCATGTCTA
CCTAGTCTCCAACAGCATGGTGGATGAGTACTTCTTCTCGGCTGACAGCG
AGATGCTGGTTGTGCCGCAACAGGGCCAGCTCCGATTTGTCACCGAGCTC
GGTATCATCGATTTAAAACCGCAAGAGATTGCCATCATCCCGCGGGGCTT
GCTCTATCGCGTAGAAGTGATCGAAGGCCCTTGCCGCGGATTTGTCTGCG
AAAACTATGGTCAGAAGTTTGAGTTGCCGGGCCGCGGTCCGATAGGCGCC
AACTGCATGGCCAATCGTCGCGACTTCAAAGCCCCTGTTGCAGCCTTCGA
AGACAGAGAAGTGCCATCCACTGTCATTATTAAGTGGTGCGGACAGTTCC
ACGAAACACACATAGGCCACAGCCCACTAGATGTTGTCGCGTGGCACGGT
AACTACACGCCTGTTAAATACGACCTCACGACTTATTGTCCGGTCGGCGC
CATCTTGTTTGATCACCCAGATCCTTCGATATTCACTGTGCTGACGGCAC
CTTCTGGTCAGCCAGGCACTGCGAATATCGACTTCGCGTTGTTCCGCGAG
CGCTGGATGGTCGCTGAAGATACCTTCCGTCCGCCGTGGTACCACAAGAA
CATCATGACCGAGATGATGGGCAACATTTACGGCCAGTACGATGCCAAGC
CTGACGGTTTTGCCCCGGGCGGTATTTCACTGCACAACATGATGCTGCCA
CACGGCCCAGACAAGAAAGCCTTTGAAGGTGCGAGCAACTCAGACCTGCA
ACCCGAAAAGCTCGATAACACCATGTCGTTTATGTTCGAGACACGTTTTC
CGCAGCACCTGACGCGTTACGCTGGTATCGATGCGCCACTGCAAGATAAC
TACATCGACTGCTGGTCCGATATCGATAAGAAATTCGACGGCACACCGGG
TAAAAAATGAAGCTCTATTCTTACTGGCGTTCAACCACGTCGTATCGAGT
GCGCGCGGCGCTGAATCTCAAAGGCCTGAGCTATGAGACCCTGTCAGTAG
ATCTAGTCGCAGGTGATCAACGTGCGACAGACTACAAAGAACTCAACCCA
GGTGCCGGCGTGCCCACGCTTGTACTCGATGACGGTACCGTGCTGACTCA
ATCCATGGCGATACTCGAGTACATCGACGCCACTTGGCCAGAGCCACGCA
TAATTCCACAAGACCCGCTGCAACGCGCACGGGTGATGGCCGCTGCACAC
ACTGTCGCGATGGATATTCACCCAGTGAATAACCTTCGCCTGATAGGTCA
GCTAAAATCACGCTTTGATGCGACACCAGAGCAAGCGACTGCGTGGATGT
GCCATTGGATGGTGGAAGGCTTTACAGCCGTGGAAGCACTGGTCAGTGAC
GACTCAGATTTCGCTTTTGGCGAGCAACCTGATATCGCCGATCTCTGCAT
CGTGGCGCAGGTGTATAACGCTCGTCGCTGGGGAGTAGACCTCGCGGCCT
TCCCGAAAATCTCGTGCATCGAAAGCAACGCTTTTAAAGTGCCGGCTATT
GCCGCTGCACACCCTGATCAACAGCCTGACGCAAAGGTAAGTACATGACA
CAGTTAATTCGCTCTTGGGTAGCGAGTGCCAACAACGGCGACACACCATT
CCCGCTCAACAACCTGCCTTACGGCGTGTTCTCAACCGCCAGCCTCGACA
AACGTTGCGGTGTCGCTATCGGCGATCAGATCCTCGACATGGAAGCTGCG
GAAGCCGCGGGCTTGGTTGATACGCAAAACACCTTGTCGTGTGCCGACTG
GGGAGACTTTATGGAACTGGGAGCTCAGCAGTGGAGTGCATTGCGTGGGC
GACTCATGGCTTTTTTGGCCGAAGGCTCTGCAGACCAAGCGGCACTTGAA
CCACTGCTAGTAGCGCAGGCTGACGCCCAGCTGCACATGCCTTTCGCTGT
GCGCGAGTACACCGACTTTTACGCCGGTATGCAGCACGCCAAAAACATGG
GCGCGATCCTACGCGGCTCACCTGACTTGCCTGCCAACTGGCTGCACATC
CCCATTGGTTACAACGGCCGCGCATCTTCGGTTGTTGTATCAGGCACAGA
CATTCATCGCCCCAATGGCCAGAGCAAAGCGCCAGACGCTGAAATGCCGA
GTTTTGGCCCGACTAAGCGACTAGACATAGAGCTAGAAATGGGCGCGATT
GTAGGTGGCTCGAACAAGCTCGGTCAGCCGATCACAGTCGACGAAGCCGA
TGCGATGATTTTTGGATATGTCCTGCTCAACGATTGGTCTGCACGCGATA
TACAAGGCTGGGAATACCAACCGCTTGGTCCGTTCCAGGGCAAAGCGTTC
GGTACTTCTATCAGTCCTTGGATTGTGACAGCAGCGGCACTCGAATCTTT
CCGCGCACCCACACCTGCGCGTGAAAAGACTTTACTGCCATACCTCGACG
GCTCTAAAGACGGTTTGTACAACATAGAGCTTGAAGTATTGATGCAGCCA
GAAGGCGCGGCATCTGCGACTAGCTTGAGCAAGACCAACTACAGCCGCAT
GTACTATTCAGCCGCAGAGCAGCTTTGCCACCATGCGATTGGCGGCTGCG
CCATGAACTCCGGTGATCTACTCGGCTCTGGCACTATCTCCGGCCCAAGC
AAGGACGAATACGGTTCACTGATGGAAGTCAGCTGGGCAGGGCGCGAGCC
TTTCACGCTAGACACTGGCGAGACACGTGGCTTCATTGAAGACAACGATA
CGCTCACCCTGCGCGGCCACGCCCAAGGCGATGGTTTCCGCATCGGCTTT
GGTGACTGCGTCGGCAAAATTTTGCCCGCTGTGCAGTGGCCTAAA
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