maker-scaffold212_size255419-snap-gene-1.34-mRNA-1, maker-scaffold212_size255419-snap-gene-1.34-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold212_size255419-snap-gene-1.34-mRNA-1
Unique Namemaker-scaffold212_size255419-snap-gene-1.34-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold212_size255419supercontigscaffold212_size255419:180149..185053 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
neurofilamentmaker-scaffold212_size255419-snap-gene-1.34Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:832maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:832Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:833maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:833Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:834maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:834Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:835maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:exon:835Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cdsmaker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cdsmaker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cds-2006905Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cdsmaker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cds-2006906Tigriopus kingsejongensisexon
maker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cdsmaker-scaffold212_size255419-snap-gene-1.34-mRNA-1:cds-2006907Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2006908auto2006908Tigriopus kingsejongensispolypeptide
Tk00549Tk00549Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00549

>Tk00549 ID=Tk00549|Name=Tk00549|organism=Tigriopus kingsejongensis|type=polypeptide|length=924bp
MEECLPQLRESGVEEYLHQPQGSVVTKGAEWKSISTAKRAEWKSISTSPK
RAVWKNISTSPKRAHWKSIPTSSKGAEWKNISTAKRAHWKSIPTSSKGAE
WKSIPTSSKGAECKNISTAKRAHWKSISTSPKRAQWKSISTSTKGAEWKS
ISTAKRAEWKSISTSYKGAEWKNISTSYKGAEWKNISTAKRAEWKSISST
KRPESENIPIAQATSESWATSPRQSLKPWSKTGRRLPASPPSRRVPSSPP
SRRVPTSPSRRPPSSPGRRGMSSPGRRVPTSPSRRAHPSPAKRGPASPGR
RGPSSPGRRGPSSPGRRGPSSPSRRAPVSPNRRQPPSPIRRPRSSPGRRA
PPSPGPRGQDYERRPPSPPYDRWGPDSPGRQYRAASPARRFPPSPRGGRD
VPSRTPSPRHRGSPSPYGRPFRRTPSPTFYLHEGTEGGVYRSRDLPYRSS
ERPVPDSTISDAELLASHRAIPPMAMEGEPFPPLESPKRLSLDERLEKEL
GITIRDAEGPPKIDFSRPPPGYPPAMSRAPLIPPQAAVPIPATALPQPGA
PFETTSVPTLLPTNMPSMVNPSEDNRLLRVGNMLQIVPNEKAVPSIPPTP
PQPNIVPPPGSAPVDPAMNLNRKIEEMTKKKEAERRMRREQRAAERLQRD
VPQPNGDLAEEQPEAVKKTSGKRILETLEKEEDQEAKEAQLLKEAMSSIP
EIEEEEVSAKAVVLEEDDEDPQAMTLKAMKRIQKEKRKAEKVMYISLKPL
TKKERKRQQRLLNMDGNNGSVVVAGDYGGDGGLGPEDEEEEEVFVKPDPV
ALPDASTCKSILMHFGSINKRAKKNLKYADGVLPGQGSPDQISEEEEEDD
DDGKKSALAPENRRKKRKKIRVRIVRTRRLNEPLSDEDEPPPPPPPGSPP
LHHTSYILKHFAWKQPRRPQDAKA
back to top

mRNA from alignment at scaffold212_size255419:180149..185053-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold212_size255419-snap-gene-1.34-mRNA-1 ID=maker-scaffold212_size255419-snap-gene-1.34-mRNA-1|Name=maker-scaffold212_size255419-snap-gene-1.34-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4905bp|location=Sequence derived from alignment at scaffold212_size255419:180149..185053- (Tigriopus kingsejongensis)
ATGGAAGAATGTCTCCCCCAGCTCCGAGAGAGCGGAGTGGAAGAGTATCT
CCACCAGCCCCAAGGGAGCGTAGTGTAAGAACATCTCCACCAGACCCAAG
AGAGCGGAGTGAAAGAGTAACTCCACCAGCACCAAGGGAGCGGAGTGGAA
GAGCATCTCCACGGCCAAGAGAGCGGAGTGGAAGAGTATCTCCACCAGCC
CCAAGAGAGCGGTGTGGAAGAACATCTCCACCAGCCCCAAGAGAGCGCAC
TGGAAGAGTATCCCCACCAGCTCCAAGGGAGCGGAGTGGAAGAACATCTC
CACCGCCAAGAGAGCGCACTGGAAGAGTATCCCCACCAGCTCCAAGGGAG
CGGAGTGGAAGAGTATCCCCACCAGCTCCAAGGGAGCGGAGTGTAAGAAC
ATCTCCACCGCCAAGAGAGCGCACTGGAAGAGTATCTCCACCAGCCCCAA
GAGAGCGCAGTGGAAGAGTATCTCCACCAGCACCAAGGGAGCGGAGTGGA
AGAGCATCTCCACGGCCAAGAGAGCGGAGTGGAAGAGTATCTCCACCAGC
TACAAGGGAGCGGAGTGGAAGAACATCTCCACCAGCTACAAGGGAGCGGA
GTGGAAGAACATCTCCACCGCCAAGAGAGCGGAGTGGAAGAGTATCTCCA
GCACCAAGAGACCAGAGTCTGAGAACATCCCCATCGCCCAGGCGACCTCC
GAGTCCTGGGCGACGTCTCCCAGACAGTCCCTTAAGCCCTGGTCGAAGAC
CGGTAAGTCCAGGTCGAAGACTGCCTGCAAGTCCCCCAAGTCGAAGGGTT
CCATCCAGCCCCCCAAGTCGGCGGGTTCCAACCAGTCCCTCTCGAAGACC
ACCTTCAAGCCCAGGTCGACGGGGAATGAGTAGTCCAGGGCGCCGGGTAC
CAACCAGCCCCTCTCGAAGAGCTCACCCAAGTCCAGCTAAACGAGGACCT
GCTAGCCCAGGTCGACGAGGACCTTCGAGTCCAGGCCGGCGAGGACCATC
AAGTCCAGGTCGACGAGGACCATCGAGTCCGAGTCGCCGTGCTCCGGTGA
GTCCAAATCGCAGACAACCTCCTAGTCCAATTCGAAGACCACGGTCAAGC
CCGGGACGTCGAGCACCCCCGAGTCCTGGTCCTAGAGGACAAGACTATGA
GCGACGCCCTCCCAGTCCACCGTACGACCGTTGGGGTCCGGATAGTCCGG
GGAGACAGTATCGCGCCGCCAGCCCCGCTCGACGCTTTCCACCATCGCCC
CGCGGTGGACGTGATGTCCCCTCTCGCACTCCGTCTCCTCGCCATCGGGG
CTCGCCATCGCCTTATGGGCGCCCTTTTCGAAGGACGCCATCGCCGACCT
TCTACCTCCACGAAGGTACCGAGGGCGGAGTGTACCGATCTCGCGATCTC
CCCTACCGATCGTCCGAGCGTCCCGTACCCGATAGCACCATCAGCGATGC
CGAGCTCCTGGCCTCGCATCGGGCTATTCCGCCCATGGCCATGGAGGGCG
AACCGTTTCCTCCGCTAGAATCGCCCAAACGGTTGTCTCTCGATGAGAGA
CTGGAGAAGGAGCTAGGAATCACCATACGAGACGCGGAGGGTCCGCCCAA
GATCGATTTTAGTCGTCCACCCCCTGGATATCCCCCTGCGATGAGTCGAG
CTCCACTCATTCCACCGCAAGCTGCGGTTCCCATCCCCGCGACTGCCCTC
CCACAGCCCGGTGCGCCCTTTGAAACTACCTCAGTCCCCACTCTCCTACC
CACCAACATGCCCTCTATGGTCAATCCGTCCGAGGACAATCGCTTGCTCC
GAGTTGGCAATATGCTCCAGATTGTCCCCAACGAAAAGGCTGTGCCCTCG
ATCCCTCCCACTCCTCCCCAACCTAATATTGTGCCACCCCCCGGCTCGGC
GCCGGTCGATCCGGCCATGAATCTCAACCGGAAGATCGAGGAAATGACCA
AGAAGAAAGAGGCTGAGCGGAGGATGAGGCGAGAACAGCGGGCGGCTGAG
AGGCTCCAAAGAGACGTGCCCCAGCCCAATGGCGACCTTGCCGAAGAGCA
GCCCGAGGCCGTCAAAAAGACTTCGGGTAAACGCATCTTGGAGACCTTGG
AGAAGGAAGAAGATCAAGAGGCCAAGGAAGCTCAGCTACTCAAGGAGGCC
ATGAGCTCCATCCCCGAAATCGAGGAGGAAGAAGGTATGTTCAGCCTGTC
GTTGTTTTAATAAAACCTTCTGGTGACTCGTTTGGCGCTGGTGGATCTCC
GGGAGACTTAGTGTGTACACTTGATTTGGAGCTTCTTCACTGTTCCAACC
ATAAGCAAGGAATTGTGGGATTTTGTTTGACCCCATGAACAATTTGGGCC
CAAAAATGTGAACGTTGCATTGAAATTTGAGATCAGAGATATCAATAATC
CAACTCTTTACGGCCCCTGATAGGTAGTGAGGTAGTGGATGACGAGAAAC
TACATATTCTGAATTAGTCACTCTATGCTGGCATCTCACATAAATGTGTC
AAAGACACAAAAATGATTAGAAATGAGAAAAAAATACAAGCAAGAAATCG
AAAGGTTGATTCAAGCTACCACAGCTGGGAGAATATGCATTTTGTTCCTG
AAATTCAAGTTCAAATCGCATTGCCTTCAAACGTTGATCTGAGTTAACCA
GCAATGGTGGCGTTTGGCATCGTGGGTGTCAATGATACATAATGTTAATT
AATCAAATACCGGTGTTAGAAATGGACGTTTGATCAATTACGGTTTGCTT
GGTCAATTGTATAGGAGGAAGGTGTCAATTATGGGAAACTTTCAACGTCC
TAATCATCATTAATGGTGCATATAGGTACAAAATAGCCTCCCAAGCGAAC
CTCCAAATTCATTATTTGGTAACCATTGCCATCTATCATATATATATATA
TAGGAGGCCCATTTGCCCAAGGGCCTGAACAAAGAATGGTAGATTGGCAA
AGGTGATTTCTATGTATAAGCGTGGAAATTAGTAAGGAAAAAGCTCATCA
TTCATAGGCAGTGGTTACAGAAAGTGAATTTGCTACCGTTTCACATCCCT
ACTCATTGGCAAGTCCCAAGACTAAAGTCATTAAATATAACCAAAGCGAA
GGCTACTACGGCTGCCGTCCAGATTGCCCAAGTGATCACAGCTTTGGAGA
CGACCTTATCTTTTCCGTTGTTTCAATAACATTGCCCGGATTTGATATAA
ACCCAGTTAGTACAACTGATATTTGGGACTGATAAAATGAAGCGTCACGA
TGAACATTTTGGTCGCAAACACGAATGATCCTCTGCAGGACTTGATGCAC
GTCGCCCGATGGCTACAAGCAAGGTGTGGATTACTCTCCTCAGTGGTGCG
GTTTCCTTTCTTTCGTTACCATTAAATGCATTGTTGGAGCGGCCTGTTTG
AAGCTCCTCTGATTAAGCCACTCGCGGAGCAACTTGCTATGAATTCCATG
TCGACCTCTAAATAAAACTAGTCGTTTACCATCTCCCGACTCGGTAGTAT
CCTAGCTTCTACATTGTCGTATTATATCCTAAGGTATCCTTCCTTGATGC
ATCTTGTATCATACAAGGCGGCAAATTGGTCTACCAATGTCTCAAAGTGT
TCAATTAAGTTTCAGGGAATAAGGGAATTTGGCTACCCAATTCAAATTTG
ATGTTTTTTGTGTTGAGAATTGCTGAACATTGAACAGGGTTGGGCGAAGA
AGCGGTTACACTAAATCGTTGCCTCCTCATAAACGAGCTGAGTTATTTCG
GCCAAACTTTGTACAGGGATTACTAACATACTCATCTCGTTATGCAGAAT
TTGGCCTGAATTGATGGCTTCCATAATGGGCTTCATCATAATGTCACTCT
ATAGGTCTTGTGTTCCCCAATCTTTGCCACCAATCGCCAATTCAGGCCAA
ATTTTGCATGACAGGAGATGAGTTGTGCTGGTAATAATTGTTTTGAAGAA
GTTTTGAAGAAGTTTTGAAGAAGTAACTCAACTCTACGCAGCCCTGTACC
TTGGTATACCGGTAGAGAATTGGCATTTTGGGAGCGAGATAAGAGTTCGG
GGTGGATCAGAGTCAAATGGACCCTCTTCCTTGAGTCATTGGCGTTGGGT
TGCCGTTACTTATCATGGACCGGGATGAAAAGTCCTGTTTTGGGGTACAT
GTGACCCTCAGCAGAATCTTCATTGTCTCATTTGACTGAATGTGTTAGGT
GTCACCGTTCCATGTAGTTCAGTATAAAATAGTATGTTGATATTTTTAGT
TTCGGCCAAGGCTGTTGTTCTAGAAGAGGATGATGAAGATCCGCAGGCCA
TGACCTTGAAGGCCATGAAGCGCATCCAGAAGGAGAAGAGGAAGGCAGAG
AAGGTCATGTACATCTCGCTCAAGCCTCTGACCAAGAAGGAGAGAAAGCG
ACAGCAAAGACTGCTCAACATGGACGGTAACAACGGGAGCGTGGTGGTTG
CTGGGGACTATGGCGGGGATGGAGGTTTAGGCCCGGAGGACGAGGAGGAG
GAGGAAGTGTTTGTCAAGCCGGATCCGGTGGCTCTGCCCGATGCAAGTAC
GTGCAAGTCCATACTCATGCATTTCGGCTCGATCAATAAGCGGGCCAAGA
AGAACCTCAAGTATGCCGACGGCGTGCTCCCCGGGCAAGGCTCTCCGGAT
CAAATCTCCGAGGAGGAGGAGGAGGACGACGACGACGGCAAGAAGTCTGC
ACTCGCTCCCGAGAATCGACGGAAGAAGCGGAAGAAGATCCGCGTGAGGA
TCGTGCGGACGCGTCGCCTCAATGAGCCGCTCTCGGATGAGGACGAACCC
CCACCCCCTCCACCCCCTGGATCGCCTCCGCTCCATCATACCTCGTACAT
ACTGAAGCATTTCGCTTGGAAGCAACCCAGGCGACCTCAAGATGCAAAAG
CCTAG
back to top
Add to Basket