maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1, maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1
Unique Namemaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2181_size19268supercontigscaffold2181_size19268:12777..14501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
zinc finger protein 521-like isoform x2maker-scaffold2181_size19268-snap-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:120maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:120Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:121maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:121Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:122maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:exon:122Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:three_prime_utrmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cds-1960799Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:three_prime_utrmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:three_prime_utr-1960803Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cds-1960804Tigriopus kingsejongensisexon
maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2181_size19268-snap-gene-0.5-mRNA-1:cds-1960805Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1960802auto1960802Tigriopus kingsejongensispolypeptide
polypeptide-auto1960806auto1960806Tigriopus kingsejongensispolypeptide
Tk09772Tk09772Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09772

>Tk09772 ID=Tk09772|Name=Tk09772|organism=Tigriopus kingsejongensis|type=polypeptide|length=256bp
MTVLDQAYILLVIFQATHEVTSLRCYQSYGRESYGTPETEACRLGVKWCI
KEYKEALETVDYGRTYEETGDDTWGTLPQGQDRESHRTLSKSQFYRDFAK
NDEIDGQVIPPEILDNGELPSGTLGSRDPYRRDQGYDDRDYPRNPSSGYN
DRDYPRNSHNAYNDRTYYDRDRNHRDPYERSRYANDAYESPRNTRVTKGC
FEGADAFVREGCVVREDAGIRVTTCYCRDEYCNESSIARNMAGLTAVLVL
LLSFVL
back to top

mRNA from alignment at scaffold2181_size19268:12777..14501-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1 ID=maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1|Name=maker-scaffold2181_size19268-snap-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1725bp|location=Sequence derived from alignment at scaffold2181_size19268:12777..14501- (Tigriopus kingsejongensis)
GTAAGAGTTATCGCAGTGAAGAAATACAAGGTACAACAAAAGATACCGTC
ATGACAGTGTTAGACCAAGCCTACATACTTTTGGTAATTTTCCAAGCAAC
ACACGAAGGTAGAGTCACTCAATTATTTATAACCAGACCAACAAAAGTTT
TGACAAATCACAAACGTACATGGTTCTATATGTAAAAAATAAATTCAATT
ACATTTAGACACACTTCTACGTATTTCATGCCATCATATTTCAGATAAGG
GATAAATTGGCAGGCAAACAACACCAGACATTTTTATCTTAAACTTCGAA
ATACACTTCATAGAAGATACCTGTAAATGATACTTGAAACCCCCTTTTGG
CCTTGTTTTGACAAACAGTGAAGCACATTTTGGCTACTCGTTAAAAAAAA
TTGTGACATATTGAGAGAGTCAGTCTAGTCAGAGTAGCAACTCAAAATAC
ATACTATAATGTGAAAAATGTTTTTGGAATTCACTTTGTTACTTTTTTGC
AGTTACCTCTTTGAGATGTTATCAAAGCTATGGGCGTGAAAGCTATGGAA
CCCCAGAAACAGAAGCGTGTCGACTCGGTGTTAAATGGTGTATCAAAGAA
TACAAAGGTGAGTGTTTCAACCATACACGTAGAGCACAGAGGTACTAAAG
TCAAGATACGTCATGAGAGCTTGCTTACTAATGAAATCAACAATCAAGGT
TGTGAAAATTTGCCTCTTAAATTCCCCGTCAAGCAAGATGTGTCAATGGC
TCCCAAACCTCTGAGGAAAAGAGAGTCGGAACTCAGTAAAAGCTGACGGT
CAACCCATCCCTACTTGATAGTGAAACTAAGAAGCTAATTTACTCAGCCA
TGGACGTTTTTTTTAATTCTATATGTTCGCTATATAATTATAATATACCC
CCGGTATATAAATAATATATATTCTATATATTTATAAATTCTATATTTTA
GTGAGCATAGACTAATCACTATGCTTTGAGAATCCCTATTGTCAAAAAAA
AACCAATTTTCCATTTCCAGAGGCACTAGAAACGGTGGACTACGGACGAA
CCTACGAGGAAACTGGCGATGATACATGGGGAACATTACCTCAAGGCCAA
GACCGAGAAAGTCATCGAACCCTAAGCAAATCCCAGTTCTACCGAGACTT
CGCCAAGAATGACGAAATAGACGGCCAAGTAATCCCGCCTGAGATCTTGG
ACAACGGTGAACTCCCGTCTGGAACCTTGGGCAGCAGAGATCCTTACAGG
AGGGACCAAGGATACGATGATCGGGACTATCCCAGAAACCCTTCCAGTGG
TTACAACGATCGGGACTATCCTAGGAACTCACACAATGCTTACAACGATC
GGACCTACTACGATAGAGACCGCAATCATCGGGATCCATATGAGCGATCC
CGATACGCAAACGATGCTTATGAAAGTCCAAGGAACACCAGAGTCACAAA
AGGTTGCTTTGAGGGCGCTGATGCGTTCGTGAGAGAAGGCTGTGTTGTTA
GAGAGGACGCCGGAATTCGGGTCACTACTTGTTATTGTCGGGACGAATAT
TGCAATGAGTCCTCGATAGCCAGAAATATGGCTGGACTGACGGCTGTTTT
GGTATTGCTCCTATCGTTTGTGCTGTAAAGTATTGTACCTGATTGTGTTC
CCGGTGTCTTAGTGATATGCGCTCTCTCTATATATAAACCCTAAATATTA
TTTTGAATAAACCTCTTGCAATCCA
back to top
Add to Basket