maker-scaffold22_size673200-snap-gene-4.22-mRNA-1, maker-scaffold22_size673200-snap-gene-4.22-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1
Unique Name	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold22_size673200	supercontig	scaffold22_size673200:455041..462405 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
polysaccharide deacetylase	maker-scaffold22_size673200-snap-gene-4.22	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1298	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1298	Tigriopus kingsejongensis	exon
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1299	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1299	Tigriopus kingsejongensis	exon
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1300	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:exon:1300	Tigriopus kingsejongensis	exon
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds-2019553	Tigriopus kingsejongensis	exon
maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds	maker-scaffold22_size673200-snap-gene-4.22-mRNA-1:cds-2019554	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2019555	auto2019555	Tigriopus kingsejongensis	polypeptide
Tk12687	Tk12687	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold22_size673200:455041..462405+

protein sequence of Tk12687

>Tk12687 ID=Tk12687|Name=Tk12687|organism=Tigriopus kingsejongensis|type=polypeptide|length=772bp
MGHFPQAAVLVASSVLLSSVLVACQRLDDNREYVLVPKHLLESTLHNSRS
PYEAIRRPDRSAGSLYAVHQEGPSAYKEYYSPPPPQTKTERSPSGPTPIR
PEFYNQLERDFNKHATAYQPSFPPSEYWEGASKEPALNNERSANPDYPSR
PPYHQIYPVEEDYQEGPSPQSRPIFEYEPYEEIETEIAYPAPEQVRETYP
HVAPDRYPQVTSEEPGSYPAHVNHKPVEAQQPAQQGDKFPNFKDRRRHIL
GSAKRQPQPVSHNRVSLIPTPLPANIGTTLTESDTFVREQKRRPQVQRRV
PQRPTPVRSQPRPEPAEHPRYAQTEEFYPTALEVPNVPNFFEEEPVGIDV
SQLPERRKFNTRRPPPRNSFRQSPGRNELPAEGIFITPPPPKQQELKKHL
KKRPIKKAPSQAEITRDRELEAHKKKHKNNQLDNLQKLIDYADGGSRSKD
PDGFQCPADGHFGDQDDCSKFYQCAHDIPLVKYCPGGLFWNSESNQCDWP
EDVDCTYTAKSLEQYQLGEEDPVTIYLTFDDGPNEGTPAILEALRRQDVK
ATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHNSKNS
PKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLP
YTNAWRAGNVKRDCYACTVPGSSGQKGMAISDRLSAQKKLLFGWDTEWEI
DWNKNRFKFGGKEMFFRLARDPRKKPQMVILSHDVAHRPYEIRDEQRELE
DFIRLAKESGYKFATIDKYELH

mRNA from alignment at scaffold22_size673200:455041..462405+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold22_size673200-snap-gene-4.22-mRNA-1 ID=maker-scaffold22_size673200-snap-gene-4.22-mRNA-1|Name=maker-scaffold22_size673200-snap-gene-4.22-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7365bp|location=Sequence derived from alignment at scaffold22_size673200:455041..462405+ (Tigriopus kingsejongensis)
ATGGGTCACTTTCCTCAGGCAGCCGTGCTCGTGGCCTCCAGTGTCCTCCT
CAGTTCGGTGCTGGTGGCGTGTCAGAGACTAGATGACAATCGGGAATACG
TCCTAGTGCCCAAACACTTGTTAGAGTCTACCCTCCACAACTCCAGATCT
CCCTACGAGGCCATCCGGCGGCCTGACCGCTCGGCCGGCTCCCTTTATGC
GGTCCACCAGGAGGGACCTTCCGCTTACAAGGAGTACTACTCTCCCCCAC
CTCCCCAAACAAAGACTGAGAGGTCACCCAGTGGTCCCACGCCCATCCGG
CCCGAGTTCTACAATCAGTTGGAACGGGACTTCAACAAGCACGCCACCGC
CTACCAACCCTCGTTTCCGCCCTCTGAGTATTGGGAGGGGGCTAGCAAAG
AGCCCGCGCTCAACAATGAGCGCTCAGCCAATCCGGACTACCCGAGCCGA
CCGCCCTACCATCAAATTTACCCGGTGGAGGAGGACTACCAGGAGGGGCC
CAGCCCTCAATCCCGACCCATCTTCGAGTATGAGCCCTATGAGGAGATCG
AGACCGAGATTGCGTACCCTGCGCCTGAGCAAGTCAGGGAAACCTACCCA
CACGTTGCCCCAGATCGATACCCGCAAGTGACCTCCGAGGAACCCGGGTC
CTACCCTGCCCATGTGAACCACAAGCCCGTCGAGGCGCAGCAACCGGCCC
AACAGGGTGACAAGTTCCCGAATTTCAAGGACCGCAGGCGGCACATCCTC
GGATCGGCAAAGCGGCAGCCCCAGCCCGTGAGCCACAATCGGGTGTCGCT
CATTCCCACACCATTACCGGCCAATATTGGAACCACCCTCACCGAGTCGG
ACACCTTCGTCCGGGAACAGAAGCGACGCCCTCAGGTGCAGCGACGGGTT
CCCCAGCGGCCGACGCCAGTTCGATCGCAGCCTCGTCCCGAACCGGCAGA
GCACCCCAGGTATGCCCAGACCGAGGAATTCTACCCCACCGCCTTGGAAG
TGCCCAATGTGCCCAACTTCTTTGAGGAGGAGCCCGTCGGGATCGACGTG
TCCCAATTGCCGGAGCGGAGGAAGTTCAATACACGGAGACCCCCACCCAG
AAACTCCTTCCGGCAGTCCCCAGGGCGGAATGAGCTGCCCGCCGAGGGGA
TCTTCATCACGCCTCCACCTCCAAAGCAACAGGAGCTCAAGAAACACCTG
AAGAAACGGCCCATCAAAAAAGCGCCTAGCCAGGCCGAGATCACTAGGGA
CAGGGAGCTCGAAGCCCACAAAAAGAAGCACAAGAACAATCAGCTCGACA
ACTTGCAAAAGTGAGTACACGGCCATTTTTTTCCTTCCATGATTTATCAA
GCTTTCTGCGCACTAAAGCTATATCTCCAGTTACACTCGCGCCAAATATC
TGGCTTTTCCCCATAGTGCCTAGCTGGTTCCATGCCCAAACCCTAAAGCC
ATAATTTCAGTCGAATAGTCGGTACAACTGAACTCAAGACAATCCAACAT
AAATGGGGCATGAAGGTTGGATATGATTTTGCTTGGTCGCTACATAATAC
ACTTGACTAAAACTTCACTCCAATAGCCGACACCCACTATAATTTTAGAC
GTGCAACAGAATGCTAGAAAAAAATATACGTAAGAAATTATTAGGGTAGG
GTTTTCAACGTTCACGTTGAAGTCAGCCTCACAGACTACTGTACTTTCCC
AAGCTAAATTAGGTATATTCTTGAAAGAAAGTAGATTTCTCAAATAATCT
TAGTTTGTTTTACTAATACGCTTTACTGTATGCAACTGCACCTTGTACAA
AAGTACCACACATGAGCACAAGGCGTGTCGCTTTGTGCCAAAGGGAAGCA
TAGAAATTAATACTGGATTGGGCATATATACATTTATATGTGCTTGTCCA
CTATAACTAGCTAATTTGTGCTAAGTGTTACATCCAGCAAGCGCCATTCT
CTAATAAACGATTACACACAAACACACACCTGTTGAACTAAAAAACAGCA
AATGCCTGATTTAGCCCCTTTTTATATCAGATTTGACAAAGTTGCGACCT
GTGGTTAGTTAATTTGGACTACACTTTAAGGTGTGTTCGGGACAGAGAAA
CCCGATCGTTCTTCCCTACTTTGGGCATTTTGCACAATTTGGGACGAGTT
GGTCAAACTTTGAGTTTTACATCACTGGGTGTTGGTTATTTTCTGCGCAA
TGTTGGAAACGCTTCACATTTTTGCAATTATCTCTTTCCTCACTTCTGGA
TTCAAACGAAAGCCATTTATCCCAGCAAGCGTGAGTAATTCTACTTATCG
AGTACACATTTAGTAGGACGCCAGAAACCAACACTTTACATACAGGTGCA
AGTTATTGTGGTTGCATATAAAATAAATCTAATTTACAAATCAGGGTGCT
AGTCGCAAAGGGAAGATACTGTGGGACAACTTCGGCTGCCTCTGACCTGG
TGGACCTCGTAGCGATTTAGCACACATAATGTTACAACAATAATTATAAA
ATAGTGGTAATAATAATGATAATAATAAAACATTAATAAACTGATAGTAA
TAGTAATGAAATATTAATAAAATGATAGTAATAAATAATATTTTATTATT
ATTAATATCATTTTATTAGTATTTCATTACGATTACTATCATAAACAATA
AAATATTGATAAAATGGTAGTAATAATATTAATAAAGTGATAGTAATAGT
AATAGTAAAATTATAGTTATAATAATAACAAAAAATAACAATAACACTTA
CGAAATGTGTCGGGTTCTTTCAGAGAAACAGTAACATCGCGAACTACAAG
ATCCTAGATGTTTTCGATTATTGTATTCAATAACTTGAAAGATAGTTGTT
ATCATTTATTTTAATTGTAACTCAAGCAACTCAAGTGCCGCTCAGCGCTT
GGAAGATCACAGAATCCAGGGCTCGATAAATTATTGAGGATTGAAACACA
TTTTCTCAGCACAAACAAAAAGATGACAGCATGCCGAATGAGTAATACCC
ATCTTCAGTTGTGAATGCAAAAATGCTCGGTTCCTTGAAAGGTTGCGAGA
TTTCAAGTGAGGGAATACCGTAGAAAATCATCAGCCGAGACCTACAGTGT
AGGCGTAGACATACTGTATAGTACTTAAGTCTTCGAAACCCATAATTGAA
TTCTGACTATTTTTTTGACAAAAAAGTTTTGCACGTTATACATACAGATA
AATATGTAGGCAAAGAACGAAAGCAAATTTCGTGCCGATTTTAACAATTG
TCAATGATTGAGCGCCAATAGGTACGGTTGTTTTTTCAAATGCTATCCCA
AACAATTAGCAACAAAGGTCTCACATGGACAAAGCTGTGGCTGTCCTCTG
CTTTCATTGGGATTGAGTCTGCCCCCTTAATAGTACAAAATTGAGGCGAC
ATTCAGAAGACAAAAGAGATATGGCCTCCTTCTTCGTCAGATCTGACTTG
TCATGGAATATGAAAGCTTGCAGACATTACCCCGACCTCAAGAGAGCCCT
TTGACAATATAGGCTGATTTGAACGAAATTGTGGTGTGTGGATGCTTCTG
TCTGTTGAAGTGCCATCTGGCCAACGACATTTCAGCTGTGCATACTACGT
ACACTCATTTCGAGACAATCAGTACTAGCGCACTTGAAAACTCAAGCCTC
CGATCACCAAATCGGGTTATATTGCCACAATGTGTACATTTGAGCGGTTC
TAAGAGTTACGAACAGATAGACCAGAGCATCGCCTAGTAAATGTATGGCT
TTCACGATAAGTTTTAGTCACGGAATGGAACATTTATGGCGCTAATAACG
CTGCATTCCACTTTTTGACCACCCAAAAACTAAAAGTGCTTGATTTCCGA
CGAAACTCTTAGATTAGCAAGCTACATTCGTCAAATATTCAGTTGTGTAT
TCTCCAATCAGGGTAACAATCCGAGTCACTACTTCAAAATGGCAAATAAA
ATAGTGCTTTATCATCACCTTGACCGTCAATCTGACGTGACAATTTTTTT
TAAAGGAACTCGCAAAACGACAGGATCATGTCAAAATAGGCCTTGGGCCA
GTGGTCGTGTGAAAGTGGTCGGAAAACTTGATACATCCTGCGGACAAATT
GACACGATTTTTACCACGTTATTGAAGAGTCAATGAGAGACCTTCACTGA
CTAGGGCAACAGCTGACCAAGAGGTATAGAAAGGCAAAACTCGAGCTAAC
CAGCACCAAAAGTATCCAGCGAAATCAGATAGTTTTTAGTTATAAAGTTG
ATAAATATTTCATTTCAAGAGTCTCAGAATTGATATAGGTGCCTCTTTAT
CAACTAATTTTAACATTTAAGCGTCCAGTAATGTGGCAAGAGAGAGTTTA
AATATCTCACTTTGAAGCAGCAGCGCGCTTTCATTTGGCCAGGCTGGGCA
CTGCTGTTTGCGCTTTTTCGTCTTTCTCTGCACTCAGGATTGCTCTCTTC
TTTTACTTCCACAAGTCTCTCCCACTCTGGGCCTGAAAACTGTAAAGGAG
AATCGGCTACGTTTGGCTTCATGACAGAGCACGGGCTCCATGGGTGAAAG
TGCCGGCCCTCATCAGTGCTACCGGATCAAGCCATTAGGCCAAATTTCTA
ACACGGTCAGTTAAGGTGAAAGATACTGACGCTCGAAAAGTAAAAGGAGA
GAGCAATCCTGAGTGCAGAGAAAAACGAAAAAGCGCAAGCAGCAGTGCCC
AGCCTGGACAAATGAAAGCGCGCTGCTGCTTCAAAGTGAGATATTTAAAC
TCTCTCTTGCCACATTACTGGACGCTTAAATGTTAAAATTAGTTGATAAA
GAGGCACCTATATCAATTCTGAGACTCTTGAAATGAAATATTTATCAACT
GTAAAACTAAAAACTGTCTGATTTGGCTGGATATTTTTGGTGCTGGTTAG
CTTGAGTTTTGCCTGTATATACCTCTTGGTCAGCTGTTGCGCTAGCCGGT
GAAGGTCTCTCATTGGGAAATGTGCGACCCAACTAATCCAGGTTGAGAAG
CAAGCAAAGGCATGGATATGTACAGTACATGTACATGGATACCAATGGAG
GTCGGAACTTGACCGTATACTATCCAAACTGAAGATAGGGCCCACTAGAG
GTGAAAAACACGACGTACCAAGCAGCTTCTCGTGGGTTTCCTGAGCTGTG
TCAATATTTTTCGATACAGAACATATAAATCAGAGGGTGTATTTTTTCAA
GAATTTCGAAGTCAGTTCGTTGGCTAGCACATGGACTTTATTTAGTTGTT
CATGGCTAGCACTAGGAAAAAATGGAGAAAAACAGGAAAATCTACGACTC
GACCAGACGACGGCGCACCGTCATTGCAAACAGGTCAAAGTTTTCCCGTG
TCGTCGTCGTTAAACTCAGGTGAATGGATTTTGAAACCGGTTGCTTGAAA
CATTGAACCAGGTGAAATATGTTTGTAAGCACTTCTGCTCCGAATAAATT
ATCCTCGCGATGCATCCAACGAAAAACAACCATTTCGTTTGGCCTCAGTT
GACAATAGTTATCGCGTAAAGCCTCTCAAATGTTGAGTCCCAATCTGTGA
TTGGCCCGGAAACAGCGGTGTGCAACGCTTTACCATTTGGTTCTTGCTAT
GCACATTCGATGAAGTACAATAGTATTCACACTACTACGTGGGTCCTACA
GTAAACAAAGAGAGTAGATACAGATCTTTTGGGTTACAAATTCATTAGGT
TTCTCCAAATGCAACTCGAGGGATGTTTCTATCAATGACATTGATTTTCC
AGGTTGATTTGTCAAGCCATAAGATGCGGCAACATTGATGTTTGGCCTTC
CTTTCCCTCTACGATTGTTTATCTTTGAGGTTCCCAAAACATTGCCGTAA
TGTTGTAAAAATCCAAATTGAAAAAGAGAGTTCTTAACAAATGGCTAGTT
ACATCGATAAAATCCAGACACAAAAAAGCTCTATGATATAAGACACGATT
TGCCTTGTCCTTGCAGTTTCTATAACCAAATTGGACTTATCAACGTGTCA
GGTGCACAACTACTAACTAGTGTTTAGCAATGACGGGGTGGTCTTTTAAG
CGCATCTGGGAATGGTTTTTATACAATACCAGCCGAGGCCATGGGCCCTG
ACTCTGCCAATATAACGATCATTGACCGTAACTCTTTGTTTCACTACAGG
TTGATTGATTACGCAGACGGTGGATCTCGGAGCAAGGATCCCGATGGCTT
TCAGTGCCCAGCCGATGGTCATTTCGGGGACCAGGACGACTGTTCCAAGT
TCTACCAATGCGCCCACGACATTCCACTGGTGAAATACTGTCCCGGGGGA
CTCTTTTGGAACTCAGGTAAGCTCCTTTGGTCCGTTTGCTCAATTTTCCG
CGACCCGTCCACTAATACTCAAAACCTCTCTCTCTCTCTCTCTCTCTGGG
ATCCGGCAGAGTCCAATCAATGTGACTGGCCGGAGGACGTGGACTGCACT
TACACGGCCAAGTCCCTGGAGCAATATCAATTGGGGGAAGAGGACCCGGT
CACCATCTACTTGACCTTCGACGACGGTCCCAACGAAGGTACGCCGGCCA
TTCTCGAGGCGCTCCGACGGCAGGACGTGAAGGCGACCTTCTTCATCAAC
AGTCGGAACCTACACGACCCGAAGGCCCACGTGGCGGCCCAGAATGCCAA
CAACCTCCTGGCCATTGTGGCCGACGGCCACGTTCTGGCCGACCACTCCT
ACGACCACATGGCGCACAACAGCAAGAACTCGCCCAAGAACGCCTACAAG
GACGTGGAGGAAGACTTGAAGTACTTTGGCATTATGAACACGTATCCGGT
GTTAGATATCCTGTGGAAGGCCGATATGAAGGAATTCATCGGTCCGGTGA
ACCACACCATGTCTTATTATGTAAGACTACCATACACCAATGCCTGGCGG
GCCGGCAACGTGAAGCGGGATTGCTATGCTTGCACCGTGCCGGGCAGCTC
AGGCCAGAAGGGCATGGCGATCTCCGACCGACTCTCGGCCCAAAAGAAGC
TCCTCTTTGGGTGGGATACCGAGTGGGAAATAGACTGGAACAAGAACCGC
TTCAAGTTCGGCGGCAAGGAGATGTTCTTCCGACTGGCCCGCGATCCCAG
GAAGAAGCCCCAAATGGTGATCCTCTCCCACGATGTCGCCCATCGGCCGT
ACGAGATCCGAGACGAACAGCGAGAGCTCGAAGATTTTATCCGTCTCGCC
AAAGAGTCGGGGTACAAATTTGCCACCATTGACAAGTACGAGTTGCATTA
GAAGAACACCACACTGCCTTTGGGTGGTGGTGATATTTATTTATTTAGTG
TACCAGTTTTTCATCGATGTTTCATGGATGATAGGAAAGTAAGGATAGGC
ACGAAACCGCAATAA

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