maker-scaffold238_size242079-snap-gene-1.20-mRNA-1, maker-scaffold238_size242079-snap-gene-1.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold238_size242079-snap-gene-1.20-mRNA-1
Unique Namemaker-scaffold238_size242079-snap-gene-1.20-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold238_size242079supercontigscaffold238_size242079:229631..236609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
spastin-like isoform x1maker-scaffold238_size242079-snap-gene-1.20Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:707maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:707Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:708maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:708Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:709maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:709Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:710maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:710Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:711maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:711Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:712maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:exon:712Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cds-2012021Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cds-2012022Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cds-2012023Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cds-2012024Tigriopus kingsejongensisexon
maker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cdsmaker-scaffold238_size242079-snap-gene-1.20-mRNA-1:cds-2012025Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2012026auto2012026Tigriopus kingsejongensispolypeptide
Tk10920Tk10920Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10920

>Tk10920 ID=Tk10920|Name=Tk10920|organism=Tigriopus kingsejongensis|type=polypeptide|length=489bp
MSANASRSTRLQLPAAVASERLEGYQYLHEALFLDEGQTSETDLMLALYR
MGAAHLARALSAARTGGRPASSEPDYWERKCREMEISLQQAHERIHELEH
PVPPPRKRVHFPQPAPGSGAAASWEASLRSYNYPATPTQKPPPPGSRGAR
ERRPDDSGPRARARGPAEPHCSEHERSLLASVIAGQTGIGFDDVIGQAKA
KQSLREAVILPILRPELFDGLRTPARGLLLFGPPGNGKTLLVKALASEAQ
VTLFNITAATLTSKFVGEGEKMMKALFELAAKRAPAIVFIDEIDSLLSER
QDRDHEASTRMKTEFLAGFDGVQTNTQSHVLVIGATNRPEKLDMAALRRF
SKRIFVGMPEYPDRLSLLSSGTSARGHPRSDARFNSFKVADAQIRLSDGI
PVISDRSTHEILSEILLLETKRMSLKNPLKLPHVAVGRIGVLEPYLAEDG
QSVPQLGDDQAIHDGLDVTSRNPLQETSDESDALIQTCD
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mRNA from alignment at scaffold238_size242079:229631..236609+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold238_size242079-snap-gene-1.20-mRNA-1 ID=maker-scaffold238_size242079-snap-gene-1.20-mRNA-1|Name=maker-scaffold238_size242079-snap-gene-1.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6979bp|location=Sequence derived from alignment at scaffold238_size242079:229631..236609+ (Tigriopus kingsejongensis)
ATGTCCGCCAACGCGTCCAGGTCCACGCGGCTCCAGCTGCCCGCAGCCGT
GGCCTCGGAGCGATTGGAGGGCTATCAATATCTGCACGAGGCCCTCTTCC
TCGACGAAGGCCAAACCTCGGAGACCGACCTCATGCTCGCCCTCTATCGA
ATGGGTGAGTCTCGGCCTCGAAACGACTCGAGCGTCGGATATGATCAGCC
TTTTGGTCCATTCTAGGAGCGGCTCACCTAGCCCGTGCCCTGTCTGCGGC
TCGGACAGGCGGACGGCCCGCCAGCTCCGAGCCGGACTACTGGGAGCGCA
AGTGTCGCGAGATGGAAATCAGTCTCCAGCAGGCGCACGAGCGGATCCAC
GAGTTGGAACATCCGGTCCCACCACCGCGGAAACGGGTCCACTTTCCGCA
GCCCGCGCCGGGTTCAGGGGCTGCGGCCTCGTGGGAGGCCTCGCTCCGGA
GCTACAACTATCCGGCCACTCCGACCCAAAAGCCACCACCCCCCGGGTCC
CGAGGAGCCCGCGAGCGCCGACCAGATGATTCAGGACCCCGAGCCCGAGC
TCGGGGTCCGGCAGAGCCCCATTGTTCGGAGCACGAGCGGAGTCTTTTGG
CCTCGGTCATCGCGGGCCAGACGGGCATTGGCTTCGACGATGTGATCGGC
CAGGCCAAAGCCAAGCAGTCCCTCCGAGAAGCCGTCATTCTGCCCATTCT
CAGGTACCCAAGCCACGACTCGGGGTCCTGAGAGTGGCGCCCAAACTGCG
AGTTTCTGGGTTCGGGAGCATCCCCAAAGTATGGGGGGATTGAAAAGGTC
ACTCTCAAATGGGGCGTTCAATGGAAGAATAGTGTCGGATACCGCCAGAC
TAAGTACTGGATCCGCAACCCAGATCAATATTTTTCCCAGCATATTCTGG
ACCTAAGTCGGGAAGGGTCTGGGCCAGTTGATCCCATCAACTCATCATGG
TCATTGTGACCTGAACTACTTTAACGCAGTCAAATCAGGGCCAGTGGCGG
GCCAAAGTTGTCGCTTATGCGGAAAAACGGGAGGAATCGCCCTGTCATCT
GGCGACAGTTTGCCCTGCCACCTGCCGTCTGTGGGCTGGTATTCACGATG
GCACCAATATATCCCTGGACTGGCATCCCCAGGTAGTCTGGCCGCTTCTG
GGTCCAACCATGACTATCTTGAACTCGGTCCCAGGATTAGAACACATTTT
CAGAAAGTCCTAAGGTCGAATATGTCTCTTCGGAGATTTCTAACTGGGAA
GTGAGTGTACTGTACTGATCATTCCTAGGGCCTTCCAAACAAACAAACAA
AAAAGGTCACTCTCCTCGGGAACGGCACTTGGCGGGTTAATGTTTAATTA
TTCGATCCAAGTGCGCCCATTCGACAAATTTGAGTGTCATCTCATGGTCG
GATGCAGGCGGTTTTGTACAGGGTCCAACCATATTTTCCCAACCACACAT
AATGACCGATAGTGGGCATAACCAAGGAGTACTAGAATCCCCTGGAGGTC
GCACAAAACGAAAGATGTGTCCAAAGACTTGTGTCCAAAGTGTGTCCAAT
GTGTCCAAAGGTTGTGGGAGCTCGAAAGCCGCTAATGTCGTCAATTGACG
GACCAAAGTTGCGTGAGACTTTCGCCTCGTTCTCAGGGTTTAAGAGTGAC
GATTCGATAAACCCTTAAACCCCTCAGGGAGTGGTAGAAATGTCTCGTGC
AACTCGGTCCGTCAAACGATGACGTTAGGGGCTATCGAGCTTCCTCAGTC
TTTGGACACACTTTTCGTTTTGTGCGACCTCCAGGTGATTCTTGTACGCC
ATTGGTTTTTGTACTACATCATCGAGTAGAATGTACTCCTCCCTTCTATT
TAAGTCCTCTTGGGCCATAACGGCTTCTGTAACGAATGACCAGCTGGAAT
TGTCTTGGAACTGGTGCACACGTTGTGCGAATGACTTCTGGATCAAGACC
GTCCCATCTTCAGGGACTCAACAGAGCTTGTTGTTTTGTGTCCCATCATC
CTCTCGAGAATTGACAAAATAGTAGAATCCATAGGATTCAAGTCTGGAGA
GTATGGGGGCCATTTCGTTTTTGGCCCAAAGTTGGACGAACTGTCCGTCC
GCCATTTTTGAGGGTTATTGGCGGTTCGAGCTGGAGCTCAGTTTGGCTGA
AAATCGTATTCCGACTCCCACTCCTTGGAATCTATCGAGGGAAGGACCTG
AGACTTTATCACGTTCAGTTAGACTTTTTAAATTGACTTTTACCCCTTTC
TGAATGACGATGAAGGGTGATTTTCGGCCATCATCAGTAACAGTTCCCCG
GACCCACGACACCAACAGGGTGTCGTTGGAGGATTGTTTTCTCATTGACA
AGGATGATCAAACTGATGGCCTTGGTCATGATTCTGTCGTTTAGGGTTTG
GAAAACTTGTTGAGCCGTAAATATCCTCATTCATCCAAATGTTGATGGGT
TGCGTACGGTATTGAAAGGTCTTCAACGAAATCCGAGATCTCATGAGCCT
CTTTGGGGCTGCTAGCTTAGCCGAGAAGCTGATACTTCTGGAGCTTGTAG
GCAGACATCCAGAGGCCTTATTTCTCGATTGGCAGGACAGAACCTCCCTA
TCCATCTTTTCACGAGACCTCTTAGGAATCCGTTGCCTGATGTGAGGATT
GTGATCTGATCCTGGTCGGCTGGATCTGGCTCGATCAGCATTATTGATTG
CATATGTGATGGCATCGTGGACAGGGGTCTGGCTCATTTCGAGTCGTTTG
GGCGATGTTTCTCTCAGTGCAGCAGCCGTCTCCGTGCAGTTTCATTTTTG
GTTGTCGATGACTAACTTCGGGCATGGCAGCATGGATCTTTGCATTCTTT
CAATATTTAACAACACAAACAAGCTCCCAAAAGTCTACCTAACAGAGTGC
ACTTGGAAATCGGGCGGAATTTGAAAAAGAAGTCAATAATATTTCCACTT
TAAATTTTGGTCCAAAACTATTGGCGGACCCTGTAGATAATTCATTCAAT
TTTGGCAGGGACACTCTGTTTTGAGTTGCTAACGAGTCAGAACCAGGCCC
AAAAGCGTCGCCGCCAGAGTAGAGTTCAGACCCTACCAACAGTCTGGAAC
CTGGAACAGTCTTCCATTCCCCCATTTTCATGAAATCACAGAGTTTCATG
AGCGATATGGAGCTTTTCTGATCGATTTCGGCAGATTCCGACACATTATG
CAGCCGTTGTGCAAAGTTCAACACTTTGGACATTTTTTCGATGCCGGAGG
TCCATTTTTTGGCTGAAGGCATTCACATTTTCTCAAACTGCAAAATAGTG
AAAGAAATCATGGCAAAAATGAGCACATTTTTGCCACCCTAGGGAAATGA
ATGCAGATTCTTACTCATTATTCAAAATCGTGTGCTCCTCCAATTCAGGT
TCCCCTCAAGCTCATGTCTACGTATGCGTTTGCTTTTGTAGTGATGGACT
CTGCCCCTGAATTGAAATCTTGTGTGAAAGACCTCTTGTCTGAACAACGA
GTTGAAACTCAATCTGCTGATTGATGGGTCCCAAACCATCTGGGGAACTT
GTTTCTGAACACGAAAAGGGTGCACAAACAAAATTGATCCTTGCCGTCAC
AGTGAATTCACACTGCCGTGACCAGGATTCGAACCTGGGTTACTGCGGCC
ACAACGCAGGGTCCTAACCACTAGACGATCACGGCTTGTAGGAACAGATA
GAGGAAGGGGGTTTGTTAGAGCATATGCCTGAGCTTCCTAGGCCTGAGCA
GCGTGGTCTGTGTTAGTATTTTGAATGTCAAGGTGACTTCTCAGCTGTGA
ACAAGGGGATGCACATTCTGAAGGACTCTCAAGTGAACTACATTTGTTAG
CGCAAGGGTTTGATGTTTTTACTCTTTCGGCCAACTTATTATTTATTATG
GGTTTCCAATGTGTTCTCAAGTACATTCTTGAAGAAAATTCCTGTGTCTC
ATTCAAAAGTACTGCTGATGTGTCCACTGACTGAGTATGCATGTTAATAA
CAGTGCTCTACGTAGTAACCAATGTTGCATCGAAAAATTTAGGACAACTT
ATCTGAGGCCAATTTCACTGGCAGCCAATAGTTTCTTAATTTGTCTCACT
TATTTTTTAATGTTTGTTCGCATTTTTATTTCTTAGTATGTTAGTACTTA
TGTTTTAATGTTTGTACTTATGTTTTTATTGTTTGTACTTATGTTTTAAT
GCTTGTATATATTTTTTAATATGGTTGTACCAATTCTTAATGTGTCTTGT
TCTTATTGTTGTTGTTTCTTGACATATTTGGCAAACATCTTTGCAATAAT
TCAAGGGTTCCATTCATCACTCCTCATCCGGGTGGATACATCAAGTTTAT
GAAACAAGTGGGCCCCTTTTTTTATTCATAGTATACTATTAAGTGATCCA
TGTATGCGTAGGCAATTAGGCATTGAGTTCACGTGATGAAATTCATGACA
TTAGGTAGTGAGCCACTAAAATATCGAAGTCTCCAAATATTCAATCAACG
CTATCTCTAATTAAACTCAAGGCGTTTCTGGTTCCTCCTCTAGACCAGAA
CTGTTCGATGGACTCCGGACGCCCGCCCGTGGTCTCCTTCTGTTTGGCCC
GCCGGGCAATGGCAAGACGCTCTTGGTCAAGGCCTTGGCCAGTGAGGCCC
AGGTCACGCTCTTCAACATCACGGCTGCCACGTTGACCTCCAAGTTTGTG
GGCGAAGGCGAGAAAATGATGAAAGCGCTATTTGAATTGGCCGCCAAGCG
GGCGCCCGCCATCGTTTTCATCGGTAAGGCGGGCTGCCGCGAATCTATCT
CTTTCTCTAGTGGGGTTTTATCTGATCCCTTGATCCTCCAGATGAAATAG
ACTCGCTGCTCAGTGAGAGGCAAGACCGGGACCACGAAGCCTCGACGCGG
ATGAAAACGGAGTTCTTGGCCGGCTTTGATGGCGTTCAGACCAACACCCA
GTCTCATGTGTTGGTCATCGGCGCCACCAATCGGCCTGAGAAGTTAGATA
TGGCGGCCTTAAGGTAATAATTCCATGTGGGGCTAAGAAAATGGAAAAAT
TTAACGTATTTTTCTTTTCTATCAGGCGTTTTTCCAAGCGTATTTTCGTC
GGAATGCCCGAATATCCCGATCGATTATCCCTCCTGAGTAAGTACTTCGT
GCCATTGCCCATAGTTTAGCCCATAGAACCCTGTACACATGGAAGAGTTA
CGCTTGCCAGACTTAGTGCCAACGTCAAAAGTGACCAGATTTTCAAATCG
GAAATGCAGATGCATTCAGCTCAAAGTTGGTGGCAAAAGTAGATAATCAC
GACTAATGCAATATTAATAGGCTTAACATGGCCAGCCTGACATCGCTGAG
AGCTTCCCAGAGTGCCCAGAGTCAGCAATATTATCTGGCATTCGTTTTCG
GTATTGGAAACTTCGACTAGCTCCAGCCTTTTAATGCTGGATTTCCATTC
TGAAAATTGGGTCACTTTTGAGTATGGCCCTAAGGCTGGCAATGTACAAG
TGTGAGTAATACTTCCAGATGTACAGGGTTCCGCGCATTACCCTACGTAG
ATTAAAAGCCCTTTCCAAGTTTCCGGAGCGAATCATTTACCCTGGCCCGG
GGACCATTTACCGGTATTGTCCAGACTGAGATTCTTTCAGAGATTCTGGG
GATCATTTCCGCCCTTTGATTGGTCGGGCTCAATTTAATGTAAGTTTGTA
TTCTGGTTATAAGTAAATGATCACTTTTTCCGCCGGACCAATAAAATCAC
ATGCAATAATTAGGGCACCGTCATAACAGCTTTCAGTGCTATACCAAAAA
CGGCTCTAATAAGTGGAGGGCACAGTTAACCAATGGCTAGGAAAGTAGTC
CAAGATACTTGATGTTGGCTGATGTTGCTACTTGATTTTTACGATGTGTG
CGATTTCTTTATTCCTTACAGCCTTTTGTCGAGTTCCATATTGTTCTGTA
AACATTTGTTGGCTTGTATTGTTTTGTGTACAATATTTGTCTTTTGTATT
GTTTCGTCAACGTGCAATATTTGAGTTCGTTATAGTTCTGTCAACATTCA
TTATTTGCATAGGCTTTTACGCATTTATTTTGTGTTCTCATTATTGAACT
GTTTTGTTTTGTATAACTTGCTCTAATACCTATTGTTTTCTGTATCTTCG
TTTTGTTTTGTATAACTTGCTGTAATATTGTTTTCTGTATCTTCGTTTTG
TATAGTTTGCTGTAATATGTATGTATGTATTTTATTTCTGTTAAGCGAAT
GACCACTTAAAGAAAATATAGCTAAAAATCTGTTCAACATGAACAATAAA
CAAAAGAAGAAATGAACAATAGGTGTGAAGGAGAAGGAGTAAGGAAATTT
AACAATATCGGCAGCGCCGGAAGAGCAAAGAGAAATTGACAGCCTACCAG
TGACTAGAAGAATATTACAGGCTAAATGGTCAAAACGGTAAATTATTTAC
AATTTGTACAATCTTCGAATTCTTCATTCTTCCTTCTTCGACACCTTGGT
TCCAAAGAGTCGCCATGGTCCGAATGTCTAATCCTTTCCTAGTCGACGGG
CCTGGTAGACGTGCCAGCTTGGACGTCTGAGACCGCAATCCCATTCCATA
GCACGTCTTCGCAGGTTCCGGAACATCCGCCAGGGGCCATCCCAGATCCG
ACGCTCGCTTCAACTCCTTCAAGGTCGCCGATGCGCAAATCCGATTGAGC
GACGGGATTCCCGTCATCTCGGACAGATCGACGCACGAGATCTTGTCAGA
GATTCTCTTGTTGGAAACCAAACGCATGTCGTTGAAAAACCCCTTAAAGC
TTCCTCATGTTGCCGTGGGTAGGATCGGTGTCTTGGAGCCGTACTTGGCC
GAAGACGGGCAATCCGTACCGCAACTTGGAGATGACCAAGCCATCCACGA
TGGGCTGGATGTGACATCGAGGAATCCACTTCAAGAGACGTCTGACGAGT
CCGACGCGCTGATTCAGACTTGTGACTAG
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