maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1, maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1
Unique Namemaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2580_size14280supercontigscaffold2580_size14280:8915..12154 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
unnamed protein productmaker-scaffold2580_size14280-snap-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1037maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1037Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1038maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1038Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1039maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1039Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1040maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1040Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1041maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1041Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1042maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1042Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1043maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:exon:1043Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:five_prime_utrmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cds-1958159Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cds-1958160Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cds-1958161Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cds-1958162Tigriopus kingsejongensisexon
maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cdsmaker-scaffold2580_size14280-snap-gene-0.1-mRNA-1:cds-1958163Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1958164auto1958164Tigriopus kingsejongensispolypeptide
Tk11333Tk11333Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11333

>Tk11333 ID=Tk11333|Name=Tk11333|organism=Tigriopus kingsejongensis|type=polypeptide|length=455bp
LQKKSDDANVFGGNEQFEGFIKDVLDELARLLNFKYRILLSDDGQYGSED
PATGKWSGLVGMVQKNRADFVAADLTVTAKRHDTLDFSRPFMTAPVTIVT
QKSSSLFGGGMFDFFVPFTWDLWLLLGLAFLITALVLFLIARISPYEQWS
EVYPVFNLSNSFWFTFSCFFRGSGYTPKTVSTRLLTAGWYLFGLSVLVVY
AIGLNGFIRAEFSGTQFLVASINSLLTGSSVQIGLIQGGSTHSMLENSEI
DVHRALYERVLEDPETNFVGSYVEGIKKVLEGDGSFALIMEGNAADYFKA
QHCDLYSIGSLTHKQYALGFPIGSRYRSILSNGLLRLRESGRLQQLVSKW
WASTANCAVEEAKQLAGAGTCQEVALSLNLGNLAWPFIIWAILLVVAVLI
ALIELFIHVAKHPTTEKNGARIVRQLKYAFCGCCVKSASLAPNECLKTRN
QSSQT
back to top

mRNA from alignment at scaffold2580_size14280:8915..12154+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1 ID=maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1|Name=maker-scaffold2580_size14280-snap-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3240bp|location=Sequence derived from alignment at scaffold2580_size14280:8915..12154+ (Tigriopus kingsejongensis)
GCTCCACCCTTTTTGCAAAAGAAGAGCGACGATGCCAATGTGTTCGGTGG
AAATGAACAATTTGAAGGCTTCATTAAAGATGTATTGGATGAATTGGCGC
GTTTGCTGAACTTCAAGTACCGAATCCTCCTCTCAGATGATGGACAATAT
GGGTCTGAGGATCCTGCCACCGGCAAATGGAGTGGTTTAGTTGGAATGGT
CCAGAAAAACGTGAGAAACAATTCATCGCACCTTAGTAAGGAGAGTGTCC
ACCGCCCGTGGACAGGTTTTTATTTTCTCTTATCTGGAGACCTCATCTCG
CACTTCCGGATTTTAGGAGTTTTCCCCAGTTTTCTGGGAGGAAATAACAG
ATTTGAAACCCATGATTGACTGATCAACGTTCTGGGACTCCCAGCGAGAA
ACTTAAATAGTTGCAGTTGAGTTTTACAAATGTTCCATCGTCAGAGTTGT
TGGGCAACTTTCCCAACTCTCACGAGATCCCCATGGGCCGGTGGGATCCC
CAGGAATCTCCGCTATCAGTTTTAGACCGTAAATCCTAGTGGTTTTGGGT
GTTTTCTCCCTCTTACAGAGAGCCGACTTTGTGGCAGCTGACCTGACAGT
GACAGCCAAACGCCACGATACCTTGGATTTCTCTCGCCCATTCATGACTG
CACCGGTCACAATTGTTACCCAAGTAAGTCCGGCCTGTTCCTCGCCTAAT
TAAATGTGGCAACAGGTGGTTTCAGGCCGCCATGAATTTAAATACATATA
CCTGTTCAACCCCCGAGGTATCCACTGAACCAACTAACCTTCCAGCACTC
GTCTTCCTAGAAATCTTCCTCGTTGTTTGGCGGGGGAATGTTTGACTTTT
TCGTTCCCTTCACTTGGGATCTGTGGCTGCTCCTGGGTCTGGCCTTCCTG
ATAACAGCCTTGGTCCTGTTTCTGATTGCTCGGATTTCTCCCTACGAGCA
ATGGTCGGAAGTTTATCCGGTATTCAACCTGTCCAATTCCTTCTGGTTCA
CCTTCTCCTGCTTCTTCAGAGGATCAGGTTACACGCCAAAGGTGAGATCC
ATTACTGAGAAGCACCCCGCTTCCCTGTGTCAGTGGGCTAAAAGCGACAT
CCCAAGTCGTCTTGGGCTATTTTAACGTGGGAGTGCGTTCTCTGACTAAA
CGGGTTAAAAACTTATTTCTAGACTGTTTCCACCCGGCTCTTGACGGCTG
GCTGGTACCTTTTTGGCTTGTCAGTTCTCGTGGTCTATGCCATCGGTCTT
AATGGATTTATTCGAGCCGAATTTTCCGGCACTCAGTTCCTGGTGGCGAG
CATCAACTCTCTCTTGACTGGTTCCTCTGTTCAAATTGGACTCATACAAG
GAGGATCCACTCATTCCATGCTAGAGGTAACATACGTACGTTTTAAACTT
GAACAATCAGCGGAGATGGACAGTTGGCGCCTCGAAACATTGGCACCAAA
TATCATTTTTTGCTTAGGTGCAGCAGAGAAATGTTCTTTAGTTTAGTTCT
TTAGGTTAGGATAGTTCCTTTAGGGCCTCGGGTGATCTGAAAGGGCAACG
TTATAGAGCCCTAGGCCTCGAGGAGTGGCCTCAGCTTTGTGGACTAATGC
TGGTAGGATATATAGAGTTGGCCAATAGTTGCACATACGGAATCCTTTCC
TTTGGTTTTGTCCACAGTCGCTTCTACGTACTACCAATGATGGGCTTCAT
TTTAAGCTCTTGCCGATTTGTTATTTTGACATACACTTTTGATATGATAT
ATGCTGTTCTTGATCAGTATATACTGTATACCTAGAGAGAGAGGTGTAGA
GAGGTGAACAACCTCTAAGTGTTCCATCACGAGTAACGAGCTACGCGATG
CTGATGAGTGATGTGGCAGTTCTGCGATACTACCAAGAGTTCATCAGGGA
AAAAGAACAAGTTTTGATTTACCTTTTACCAAACGCTTTCCCGTTGTCAC
TTGAGTGGCAGTTTTTTAACAATTTTGTTTAATATACGTGTTTTCCCAGT
TTCACATACTTCGCTCATTCCAATTTGGACCATACTTATTTGCAACCTTT
GGTAAACTCAACTGGATAACGAGCTGAAACGAGGTTGCCTCGTCTGTATA
GATAACACTGGTAGGCAGATTAGTACTACTAGATTAAGATAAGATCAAAA
TTAAGCTTACTTCTTAAATGCTGCAAATAATGGGTTTCGACAAAATATTT
GAGGCAACACACACCGATATGAAAATTTGTCAATCTTGCGTACCCAAACA
TCACACCAACACAGTGGATGCAAATAAATGCTCTGTCCTAAAACACAGAA
TTCGGAGATTGACGTGCATCGAGCACTGTACGAACGTGTCCTGGAGGATC
CCGAGACCAACTTCGTGGGATCCTACGTGGAGGGGATCAAGAAGGTTCTT
GAGGGTGATGGCAGTTTTGCATTGATCATGGAGGGCAATGCTGCGGATTA
TTTCAAGGCACAACACTGCGACCTCTACAGCATTGGTTCCTTGACGCACA
AGCAGTATGCTCTCGGATTTCCCATCGGTAATCCTCAACACGGCTCACCG
ATTTTCGCAAGGAATGGTCACTCATTGTTATACATTTCCCAGGCTCTCGA
TATCGCTCCATCTTGTCCAACGGCTTGCTGCGTCTCCGAGAATCTGGCCG
TTTGCAGCAATTGGTGAGCAAATGGTGGGCGTCGACCGCAAATTGTGCGG
TGGAAGAGGCCAAACAGTTGGCCGGGGCGGGCACTTGCCAAGAGGTGGCT
CTTTCCCTCAACCTGGGGAACCTGGGTGAGCACTTAATTCTAGAAATTGG
CGGGAGCCCTCGGTGGGGAACTGGTTTAACTGGATTAACATTTCAGCTTG
GCCTTTCATCATCTGGGCGATTCTGTTGGTGGTGGCAGTGCTAATTGCTC
TCATAGAGCTATTCATCCATGTAGCCAAGCATCCCACCACCGAGAAAAAC
GGAGCCAGGATTGTTAGGCAACTCAAGTATGCCTTTTGCGGCTGCTGTGT
CAAATCAGCCTCACTGGCGCCCAATGAGTGCCTCAAAACCAGAAATCAGT
CAAGCCAGACGTGAGTCTCGTGATGGAGATTATGATTTTGAACCCAATCA
AACGGCGATCAAACATTCTACGTACTGCGAATTGACGGCAATATACCTCA
GATGTCACGATCACACTTGCAAAAAATTAACAATGAGGGATTACATATTA
AATATTGTTGTTAATAATGATTAATGCATTGTCATCCAAA
back to top
Add to Basket