maker-scaffold259_size234575-snap-gene-1.20-mRNA-1, maker-scaffold259_size234575-snap-gene-1.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold259_size234575-snap-gene-1.20-mRNA-1
Unique Namemaker-scaffold259_size234575-snap-gene-1.20-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold259_size234575supercontigscaffold259_size234575:191834..192342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
probable e3 ubiquitin-protein ligase herc1-likemaker-scaffold259_size234575-snap-gene-1.20Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:exon:553maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:exon:553Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:exon:554maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:exon:554Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.20-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.20-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.20-mRNA-1:cds-2008338Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2008339auto2008339Tigriopus kingsejongensispolypeptide
Tk11162Tk11162Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11162

>Tk11162 ID=Tk11162|Name=Tk11162|organism=Tigriopus kingsejongensis|type=polypeptide|length=149bp
IVAQSTAYTFRTSPVDRRSSLKSSSSPEASKLRSCSLKSEVFVWGSNSSN
QLGEGVRERLLEPKRSEGFQDVMKMEAGQYCTFVLHGDGQVSACGKGSYG
RLGFGDSNNQLIPRILKIGGAIKDISSSKGSDGHTLALTEGGEVFSWGD
back to top

mRNA from alignment at scaffold259_size234575:191834..192342+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold259_size234575-snap-gene-1.20-mRNA-1 ID=maker-scaffold259_size234575-snap-gene-1.20-mRNA-1|Name=maker-scaffold259_size234575-snap-gene-1.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=509bp|location=Sequence derived from alignment at scaffold259_size234575:191834..192342+ (Tigriopus kingsejongensis)
ATCGTGGCCCAATCGACAGCATATACCTTTCGAACTTCCCCGGTCGACCG
TCGAAGTTCATTAAAGTCGTCGAGCTCACCGGAGGCTAGTAAATTACGGT
CGTGCTCCTTAAAATCCGAGGTCTTTGTTTGGGGTTCCAACTCATCCAAC
CAACTGGGTGAAGGTGTGCGGGAGCGACTCTTGGAGCCCAAACGCTCAGA
AGGATTTCAAGACGTGATGAAGGTAACCGTTGACGTAGCCGATTTACTTC
TACGGAGTTGCCCTTCATTTGTCCACTCATTTAGATGGAGGCTGGTCAGT
ATTGCACCTTTGTCCTGCATGGTGATGGTCAAGTTTCAGCCTGTGGTAAA
GGCAGCTATGGCCGGCTAGGATTTGGTGACTCCAACAACCAGTTAATTCC
GAGGATCTTAAAGATTGGCGGAGCGATCAAGGACATCAGTTCATCCAAGG
GGAGCGATGGCCACACTTTGGCCTTGACCGAAGGTGGCGAGGTGTTTTCA
TGGGGCGAC
back to top
Add to Basket