maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1, maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2625_size13816-snap-gene-0.5-mRNA-1
Unique Namemaker-scaffold2625_size13816-snap-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2625_size13816supercontigscaffold2625_size13816:675..3092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
malate-- ligase subunit betamaker-scaffold2625_size13816-snap-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:131maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:131Tigriopus kingsejongensisexon
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:132maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:132Tigriopus kingsejongensisexon
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:133maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:exon:133Tigriopus kingsejongensisexon
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cds-1950093Tigriopus kingsejongensisexon
maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2625_size13816-snap-gene-0.5-mRNA-1:cds-1950094Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1950095auto1950095Tigriopus kingsejongensispolypeptide
Tk08565Tk08565Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08565

>Tk08565 ID=Tk08565|Name=Tk08565|organism=Tigriopus kingsejongensis|type=polypeptide|length=637bp
MARPKIALIGAGQIGGTLAHLAAVKELGDVVLFDIAEGAPQGKALDISES
GPAGKFDGSFKGSNDYADIAGADVCIVTAGVARKPGMSRDDLLGINLKVM
KSVGEGIAAHAPNAFVICITNPLDAMVWALREFSGLPHHMVCGMAGVLDS
ARFRHFLAEEFNVSMRDVTAFVLGGHGDTMVPLTRAYGLDGFYVGVPTVI
GAGGIERVVEIKMNKDEQAMFDKSVEAVKVGKIHPNRGTDMNIHEYQAKA
LLKSYGAPVSDGRPVMKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK
EADAGDAGGVRLTKSVEEAAQEAKKMLGRTLVTHQTGPAGKQVNRVYIED
GSGIETEMYLALLVDRQTSRIGFVVSTEGGMDIEEVAANTPEKIINFSVD
PATGYQAFHGRRVAFALGLQGAQVKQCVNLMGILFKAFVEKDMEMLEINP
LIVTDKGDLKVLDAKVSFDGNSIYRHQDIAALRDETEEDPKELAASKYDL
NYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTE
AFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE
GTNVDEGKAIINNSGLDVIAADDLKDGAQKIVAAVKG
back to top

mRNA from alignment at scaffold2625_size13816:675..3092+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1 ID=maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1|Name=maker-scaffold2625_size13816-snap-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2418bp|location=Sequence derived from alignment at scaffold2625_size13816:675..3092+ (Tigriopus kingsejongensis)
ATGGCTCGACCTAAAATTGCTCTTATTGGTGCCGGACAAATCGGCGGCAC
GCTTGCGCATCTTGCAGCGGTAAAAGAACTGGGCGACGTCGTCTTGTTCG
ACATCGCCGAAGGCGCACCGCAAGGTAAGGCGCTTGATATTTCCGAATCC
GGTCCGGCAGGCAAATTCGACGGGTCCTTCAAAGGCTCCAACGATTATGC
GGATATCGCTGGCGCAGACGTGTGCATCGTCACAGCAGGTGTTGCACGCA
AGCCGGGCATGTCCCGCGATGACCTGTTAGGGATCAACCTCAAGGTGATG
AAATCCGTTGGCGAAGGCATTGCAGCCCATGCGCCGAATGCCTTTGTGAT
CTGCATCACCAACCCGCTTGATGCGATGGTCTGGGCCTTGCGCGAATTTT
CCGGCCTGCCACATCACATGGTCTGCGGCATGGCGGGTGTGCTTGATTCG
GCACGTTTCCGTCATTTCCTTGCCGAAGAATTCAACGTCTCAATGCGCGA
CGTCACAGCTTTTGTGCTGGGCGGTCACGGCGACACGATGGTGCCACTGA
CACGTTATTCCACCGTTGCGGGCATTCCGCTGCCTGATCTGGTGGATATG
GGCTGGACCACACAAGACAAGCTGGACGCGATTGTGCAGCGGACACGCGA
TGGTGGTGCCGAAATCGTCGGGCTGCTGAAAACTGGCTCTGCATTTTATG
CGCCTGCCACATCCGGTATCGAAATGGCCGAAGCCTATCTGAAAGACCAA
AAACGCGTCCTGCCATGTGCGGCACACGTCAAAGGCGCTTACGGGTTGGA
CGGCTTTTACGTCGGCGTCCCCACAGTGATCGGTGCTGGCGGGATCGAGC
GTGTCGTCGAGATCAAGATGAACAAAGACGAACAGGCGATGTTCGACAAG
TCAGTCGAAGCGGTCAAAGGTCTGGTCGCTGCTTGTAAAGGCATCGACGC
AACACTGACGTAAGTCAGCAAATCCATGATTTTCAAAGGGCGCTGCATCT
GTGTGGCGCCTTTTTTGTTTTCATGCCTGACACATTTAAGCGTTCGGTGC
GATTATCTGCCGCTGCTCGAATCATATACGAAGGCCTATAATCCATTTTG
TGATCACACTTAAAAACACTGTGATCACAAATGTCGGTTTTTTTTGAAAT
TCCTCATTTCGTAGTTTTTTCTTAAACACTCTTGTGGTTCAGTTGGGAAA
ATTCACCCCAACCGAGGGACCGACATGAACATCCACGAATACCAAGCCAA
AGCCCTGCTGAAATCATACGGCGCACCCGTCAGCGATGGCCGTCCGGTTA
TGAAGGCCGAAGACGCCAAAACAGCAGCCGGCGAATTGGATGGCCCGCTT
TGGGTGGTCAAGGCCCAAATCCACGCTGGTGGACGCGGCAAAGGATCCTT
TAAAGAAGCCGACGCAGGTGACGCAGGTGGTGTCCGCCTGACGAAATCCG
TCGAAGAAGCCGCCCAAGAAGCTAAAAAAATGCTGGGCCGCACCTTGGTC
ACGCATCAAACCGGACCTGCTGGCAAGCAAGTGAACCGCGTTTATATCGA
AGATGGCTCTGGCATTGAAACAGAAATGTATCTTGCCCTGCTGGTCGATC
GCCAAACATCGCGGATCGGTTTTGTTGTTTCAACCGAAGGCGGCATGGAC
ATCGAAGAAGTCGCGGCAAACACGCCCGAAAAAATCATCAATTTCAGCGT
TGATCCCGCGACCGGCTACCAAGCCTTTCATGGCCGCCGCGTTGCATTTG
CCCTTGGCCTGCAAGGCGCTCAAGTCAAACAATGCGTCAATTTGATGGGC
ATTCTGTTCAAAGCCTTTGTCGAAAAAGACATGGAAATGCTGGAAATCAA
CCCGTTGATCGTCACCGACAAAGGCGATCTTAAGGTGCTGGACGCCAAAG
TATCTTTCGACGGCAATTCCATTTACCGCCACCAGGACATCGCGGCCCTG
CGTGATGAAACCGAAGAAGATCCAAAAGAACTAGCCGCTTCAAAATACGA
CCTGAACTACATCGCGCTTGACGGTGAAATTGGCTGTATGGTGAACGGTG
CCGGCCTTGCGATGGCAACAATGGACATCATCAAATTATATGGCGCCGAA
CCTGCCAACTTTTTGGACGTGGGCGGCGGTGCGACCAAAGAAAAAGTCAC
GGAAGCCTTTAAAATCATCACCTCCGACCCCAATGTCAAAGGTATCCTGG
TCAATATCTTTGGCGGGATCATGCGCTGCGATGTGATCGCGGAAGGTGTT
GTCGCCGCTGTGAAAGAGGTCGGTTTGAAAGTGCCGCTGGTTGTGCGTCT
TGAAGGAACAAACGTCGATGAAGGGAAAGCCATCATCAATAATTCCGGCC
TTGATGTGATCGCAGCCGATGACCTCAAAGATGGTGCGCAAAAAATCGTT
GCTGCCGTCAAAGGCTAA
back to top
Add to Basket