maker-scaffold273_size229271-snap-gene-1.23-mRNA-1, maker-scaffold273_size229271-snap-gene-1.23-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1
Unique Name	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold273_size229271	supercontig	scaffold273_size229271:105817..113769 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
nephrin- partial	maker-scaffold273_size229271-snap-gene-1.23	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1095	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1095	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1096	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1096	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1097	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1097	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1098	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:exon:1098	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds-1994949	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds-1994950	Tigriopus kingsejongensis	exon
maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds	maker-scaffold273_size229271-snap-gene-1.23-mRNA-1:cds-1994951	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1994952	auto1994952	Tigriopus kingsejongensis	polypeptide
Tk00753	Tk00753	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold273_size229271:105817..113769-

protein sequence of Tk00753

>Tk00753 ID=Tk00753|Name=Tk00753|organism=Tigriopus kingsejongensis|type=polypeptide|length=224bp
MAASLPRRSGPHFPWLLLAAAVTLTLGHKRGSVQSGSSARWRREPFVLQE
EVESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTF
DARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLM
IQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMS
STLGPYKVGQELIATCVTSGGKLL

mRNA from alignment at scaffold273_size229271:105817..113769-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold273_size229271-snap-gene-1.23-mRNA-1 ID=maker-scaffold273_size229271-snap-gene-1.23-mRNA-1|Name=maker-scaffold273_size229271-snap-gene-1.23-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7953bp|location=Sequence derived from alignment at scaffold273_size229271:105817..113769- (Tigriopus kingsejongensis)
ATGGCCGCCAGCCTTCCCCGCCGCAGTGGGCCGCACTTCCCCTGGCTCCT
TTTGGCAGCCGCAGTGACACTAACCCTGGGACACAAGCGAGGATCCGTCC
AGAGTGGATCCAGTGCCAGATGGAGACGAGAGCCATTTGTTCTTCAAGAA
GAGGTGGAATCAGGTAAGAGCGAGGCAGGAGTCCATTGAGCTTCGTCCAG
CGTGTGTGTGTTTTGTATTCAAATGTGTACCTGGCGGATATCGGAAGTGG
TCCCACTCAATAGGGGGATTGGCGAACGCATTTTAAAATATGGGCGCTTA
GAATTTCCCATCCTTGACGTGAGCCTGGCTATCATTTCTGGAGAGTAACC
CAACCCATTTGGAGTGAGCTACAGAGTGCCCAAGGAGGAAGGAAACAAAG
GGATGTCGGAAAAGTGGAATGTGTTCCATCACATTTGTCAAGCCCATATA
GCATCAGGGGGCTGAGTAAGCACACGTGCAATATCGTTTCGATATGGACT
ACTCATTCAAGGGTACATATTCCAATGGTTCAAGATCGGAAGTATACGGT
ATTTCCGAAAACCCACTCCAGGGCGACCAAGGGTCTTTTCTCTCTCACTC
TCTCTCTTCCCAGTCGAGCTTTATCTTCCATTTTATTACATACCATCCGC
TCGTCTATGAATTATCTCAGTTCGCCAATCGTTGGCCAGAAATACCAAAG
CCACTTCCATATTGAATCGGGTCCCAATCTTCAGAGTTCTTGCTTTTAAT
CTTGAGGTGCTTAGAACTAAAGAACTGCTCCTCCAACAATCGCTCTTCCG
AGGAGTTAAAGCGTTCTGTGCCATTCTTCTAAAAACGTAGCAAACATGTG
CCCATATATGAATGATCAGGTACCGGTGCAGGACAGTGAGTGTAAGACTG
CTGGTTTCCCTATTTGTGGCGTTTTTGATCATATGAAGAAGCAGAAAACT
CAGTTGTATTTCCATTTTCCATTTTTTCGTGGGTGGCTTAAGTAGATTGT
CAAGTGCAAAATGAGAAACCTACTTTTACTTTCGTCCCCTCCATCGCTAA
TCCGGAGAAGGCTCGTGTTTGGGAGGCGAGTCGGGGAAGTATAAGGGAGC
CCCAATTCCACCTCTGAGGGTTCATTAATGCCATCAAGGCACGCATCCCG
AGCGAGTGGCTAAAGGATTCTTCATTTGGAAAATGAAGTGCCTTAATCTA
ACTAAACACGATGTCAGAGCTTCATGAATTATTGTCTTCCGACCCGGTTA
TCTGGTGCTGTAAACTTGGCCTCCAGGCCTCGTCATTTCGAGTGGTCTGC
TCATCAATATTCCATTACATGCATTCATAACCAAGGGAGCGTGACCCATG
GACTAAGTGGGATGAGCCAGGGCCACCACCACGCTCGACACTCGCTCCAG
GACCCAACCACTCCCTCCACGGACCCACTTCTCATCCCATAACAACACAT
TCACTCAATCTTACTAATACAAATTGTCAAGATTGCCAGGATGGCACCTC
ACCACCTTGTTTGGGGCCAACATGAAGGCCTTGGATAAACTTGGACCATC
TCAGTGGGATCAAGCAATGACCCGGAGGAATATTGCTCCATAGTGATTGA
CTGAGCCCAGCGTGGCTGTGGATAAAAGGGTCCAGAGGAGGAGGACCTTT
GGCTCTCCAATATCCATTGGCCTCACCTCGGAAGGCCCCCAGTTTGCTTC
TGGGCATGTCCACACGTTGGCCTCAAAGAGAACAAAAGCGCTTGGCTGGT
TGCCCACTGATTGGCCCAAGGATTCTCAACCTGCGTGGCTTTGTCACTAG
GTCTTTGACTCCGGATGGAACTACTCTGAGTCAGTGGGTGGAAGGCGATG
AATCTTGGACCTAGAACAATGAGGGAGCCTACCATGAAGCCTCATTGCAC
ACTGGGAATTAAGGGAAAGCCATTCATGTTCATGGCAAGCTCGCGTGAAT
GTCACAATTGGTCTCGGGTTCCTGGCTCCAAGAAATTTTAGTTTGGCGTG
GCTACTCTCTGTTTCAATCATCCTCCCTGAGTGCTTTGGGCTCGCAATTT
CCATTGTTGCCACTATGAAGAAGGCTCAAATTTACGGGGAACCAACTAAC
AATCAGATCGGTGGATGGGTTGATTGAAAAAGGGGTAAATCGGGAATAGT
TCATTCTAGCCAAGACAACTCTGCTGGAGGAGGTTTTCCCAATTTACTTG
GTTAATATCGGATTTAAAGTTGACATAATGCCAGACCACCAGCCAAATGA
ACTGGAATCACATTCACGATCGAGAGCTAATAGATTAACACGGGGGAAAC
TAGAGTGAACTAATCGGATCTGGGTTTTTCTACTGAATGCTTGCAATGCA
GAATGGTTTGGATATTCATGGCCTATGAAAAAGGACAACAAGAGGAATAT
TTAGAGGAATAAAAGACTTGACAACATTTGAAAATATGTCGATATGGCCA
AGAGGACTATTGGGAAATATCAGTTACGATTTGTTCACACATTTTGGAGG
CTTCAAGCGGCTCAAATTAGGAATACAACTACTCTTTATGTACAGTATTC
CTTTCTGTGGACCTAGCAGAAACAAATAGGTTAATCTTCTTCCGATGGAC
TCAAAGTACAAGTGCTATTGGAAAGTATGTCTCCCCTCAAAAAAACTAGG
TTTCGTCCCAACAGGATTGGTTTCTTTTCCCTCATATCAAATTCAGAGTG
CATCCGTCCACTTTAGCTGGAGCTGTCCATCGTCGGTCCACCGATCAAGT
CCCAATCTGCTGTCAAACGTGGGTGGTTCTGAGCCAACGGTAAAACACGC
ACTCGACTTCCGAAAGGCTAGCCAATGGACGCATATGGACCATTGGCTGA
AACGGACGAGGGTGGCTCAAGTGTGGGTATTCTTTGACTTGGGGACAAAG
TCCGACCTGGGACCCGGCTCGTGGGACTGTGTTGGAACGAGGGGAATAGG
TTGTGGGTGGATGCTTGTTGAATTTATTTATGGGAGGGAGGATGTGGGCG
GCAAAAGTGGTGACTCATCGTCACAGAGGAACGACAATTGGCAGCAATCC
CACTTGTCAAATTGAGTCATCCGAGGTATTTGGGCGCCAGCTCTCGAACG
TGTGGACAGCATGTTCCAAATGAAAGACCACTCTCCCTTCATTGGTCCAA
CGATGCTCGTCCAGGAAATTGCGGTTTTACCTCTCTACATCACGACGAGG
ACCAAGATAGTCAGGGTAAAATGCGACCATTTTTCTTGCCACTGAGAGAA
CGTGTATCTAATCTCTGCATCAGTCTGCAACACCCTTGGTTGGCTGAGGT
TGGAGGACGAGAAGTCTGGCAACCAGCTGGTTTGTCATTTCTTCTTCCCT
TGAGTAGCTTTTTGTGCCCTTGGAGTCGTGCTCCATGATAAATGGAGTGG
ACGCTGAGCTGAGTGTCCAATAATTAAAACATCCCATCCAGTCTAATGAG
CTTTTTCGGGGCCAGCCAAAGCTGCACTCGGGCTACTGGTGGTCACGTCC
CAAGACCCGCAATGTGTCTGAAGATTCGAAAAAAGTCACCGACCTCGGAC
TTCTGGGCAAATCTGTAGATCTGCAGTCCATTTCTCCACAATTCCTCACA
TGCATATGCAGTTGGAAACCCGCTTTGATGATCCACCAACAAAAGCGAAC
AAAAGTTGGCTTAATAAATAATGCTTTGAAAAGAGAGAGAGAGCGAAGTT
TCCATGTTGGCACGTTTTTAAGTAATTGGTAGCCGAGCTCAAAGACACAA
AAGTTTCCAGTTCTACTACACACGTAGTTGTACGTACAGTACCACTTGTA
TGACAACTCCTGGGTACTCAGAGTTCCAACTGGTGGCGAATTGCTACGTG
GGATCATGGTTCTGCTTCTGCTTTAAAGTTTAATTTGCTCCACGGATGAT
GGTCTGAAGTCAAAACTATTTCCTAATAATGACTCAAGTTGGACCAAACC
AGCCAACCAGACGTAAGCTTCTCGAAGAATTTACCAGGGCACCAGTCTGA
GCTTATCTGGCTTTAGCTGTGCTTGTCACTTCTTGACGATATTTGTTCTC
TTACAGTCTTTCGTGGGTTGTATTTACGTCTACTGTAGGTACAGCATAAG
GTTATCAACCCAATTTAGGGGGTTGGTTCACATTTAAGATGCAGATCAAG
CACAAAACGAATTGGTTCCCTAGAAAACGAGTTATTCGTGTTTTGGAGGG
GGCCATTTTCAATTCAGTATTTGTGCCTCCCTTTGTATTTTTCCACTGCT
GATCATATTTTTTTGCTTTTTCGGAGAATTTTTGTCGTTTTTGAATGTCT
ACCTCAGGACTGTTCGAGATTAGCACGGGGAACATTCCAAAATAGTAAGA
GTCATCGAGCAACAAATTTGCAAATATAATTATTATTTTGTTCTTTTTTA
GACACTTGAAACAAAATCTAAAGAGGACATTTTCATTGCTTTGCGACCGA
AAAGAGACTTTTAACCTGGGTCGAGAGCTTGGATGAGGGGGGAATACAAT
CGCTGCACTACGCCATATTCCTTACATAGAATATTATTGTTGTGCCCAAG
CAGAAATAATCCTTTTGATTTATGATCCCAAAATGAGCAGATACTAAAAT
AATTGCCAAAACTCGTGCCTACGAGAAGAGTTAAAGCCCCAGAAACCCAC
CTTTTGAGTAGAGGTAAATACACTCTCGATGTGAAACGCTTATCCCTCAA
CCTTGTTTGAAACCAAGAGGCCCGAAGTTAAGTTTGAAGGCAAGCACTCT
AGGAGCCAAATGTGAACTTGTCCTTGAAGAATGGACGTTGGAGTAAAAGC
TTCCAACTTTGCTAAACATCTTTAAAGTGTGCATGTTTCAAACATTTCAG
GCTCATGACTCGAGTGCAGCAAAAACATGGATCACCTAAAGTACAAATTT
GTGTCAAAAACCCGATTAAGTCTTTGTACAGAGAGCGTAGAATGGATACT
GGTTTTTTTCGGTACCGTGTATGGAACTGTATGCCTAATTTTCAATTTGC
CTTAACATGAATGGCTACAATTTGACGGCAAATTAAAACAATACATAAAA
ATATCGACCAAAATGGCGGTTTTCATATGAATTTGCTCCTCAGAAAGAAA
AATTTGCTCATACTTTAACCTGTTTCTCAGCTCTTGCAACTCCTTGTCAC
TTATTTTTCCAGGTATAGTCCCCTAAAAATCCCCGAGAAAGTCATATTTT
GGCCACACTCTACGCAAGGCAGGAAGAAGGTCCCAATGTTTTGAAATACG
ATGAGTTGGTCGTACCTCAGAGACCTCGAATTTGGGCGGAAAATCTAGCC
TTCCCTTGGAGAGCGTAAATAAGTGGGGATTCAATCCCAATTGGATTTCC
CTTGTTTTTCTCATCCAACCGCCGTTTGGGTGGATTGTTGGGTGCCAAGG
GAACAAGCCCAAGAGGAGCTTATTCCACTACAAAGGGCCCCAGCCGAATC
TTCTCTATGTCTTTCCATCTCGGTCGTGATTGTGGCGAGGGTGTTTTAGC
ATTAAATCGGATCAGTCTGGGCCTGAGGCCTTTGGGCTTGCTCCATATGT
CTAATGCAGGTGATCCCAGGGTGAAGTGCTTTTACATCCAGATTGGTTTT
TGTGTCAGTGAGAAGAGCGGAGGAAATTACTGTTGGTCGTAACAACGTAA
AATTCCTAATGGGATCTCGGAATGAAAGGACTGCCGCTTTGAGTATTCGT
TCAAGGGCAGAGATATAAAACTGCCTTCCCGAGTGCATTCCTTCATGGAC
TCCCAGTTATTAAACCTTATCTTATTGCCTTCCAGAATTCTCTCAAAATG
TCCTCGGCGTGGTTGGATATCCTTCTGAGCTGGAGTGTGACATTCAACCC
AAGGCACCCCATGACCAGCTTCTCCTCGTTCTGTGGTACAAGGAGGGCTA
CAATTCGCCAATTTACACGTAAGACATACCCCACGTCAATTACCAGACCC
CTGGCTTACCATTTCAAGCCCTTCTGGTCCAGGTTCGATGCCCGGGGCAA
GACTTCGTTGGCCGTGGCAACCCATTACTCGGACGAAGGTGTTTTCGGTC
AGCGAGCCGTGCTTAAAGTCCCACCAGGCGGAGGGATCTCTGGGGACGTG
CCCGACCAGTCGGGCACCCTCAAGGCCAGGCTGATGATCCAGGAGCTCCG
CCCAGAGGATCAGGGCATTTTCAAATGTCGGACGGACTTTAAGAAGTCCC
CCACGCAAAACTACAAGATGAACCTCAACATAATGGGTGAGTGCTGAAGC
AAGTTGAAGACTGCGGAGGGACAGATGTGAGTTGGTTTGTGAAGTTCTTC
GGCGATCTTATCAACGCCCTTTCTAATCTGGTCACATACCATGTCGTAAG
CCGTCTGTTGGGCCATCTGAAGTTTTCAAGGACATTATCCATGAAGCTAC
GGCACATTTGGATGGCATCTGGTCAACCTGGGCCGAGAGCTTAGATGAGA
GGGGAAATTTCCATCAGAAACTTCCAGTTCCGGGTTGTCGAGTCAGAACT
CGCCCGGAACAAGAGAGCGTCCACCCACTAATGGAGCGCAAATTTCATGT
CAACTTGGTCAATTTGACCCTTGGTGCAACCAACTCCAGACATGTTGGGT
GGTTTGGTGGCAATATATGCGTTGACGAAAGCACTTCTGGAAGGGAAAAA
ATTGGCCATCTTGAGGCGGAAAGTCTATTCTCAATTCCAACTGTCTGAGG
TCAATTACCTCCAATGGCAAAAACTGCCAGTTATTTTACCCGGAAAAGCA
GAAACATGCCGAGAAGCGAAAAGGAGGACGAGGATGAAGATAAGGGGAAA
AGTTTCTTCCTCTCTTTAGCTCACATTTGTGTTCCAAAGAGCAATACTGG
CGAACGGGTGGAACATGGGCGAGATCTGCTGGGCTTCCCATTCGTCTCGT
TTATTTAAATTAAAGTGGGCGACTAAACCAAACCAGGCCAGACACCACTC
GACTGGCCGGGAGCCAATGGACCAATATCTGCTCACTTGAAAGAAACAAC
AGACAGCACTTTTCTCGGAACGAGGGCGTTACAACCGTTTGGAAATAATT
TTCTGATTCATTGGGCCCAACATTGAATTTCTGGGTTCTGGCCCAAGCAA
TGGGAGCCTCGGTTCCCATTATGAACCTCGGCATGTGTGTGAAAGTCCGG
ATCGAGCTAGAGATAAAATCCGGCAGGAGATTGAGGGAGAAGTGCTACGC
TCAACGAATGTGTGTGTAGGGGGGGATAGGATTGTTAAAATGTTTAATTA
ACCGGATAATTGCTTTCATAACAATTCCCAGTTTAGGCATACTAATCCTG
GGGCTGAAAAGTCATTAAAGGTGGCTTCTTATTACCCAAGTTGTACGGTG
GTACAGGGTGTCACCCCTACAGCGTGGTGTCCCCAGTGATTCAGTCGCTG
CGAGTAAGCCACATTCTACTACCCTTAACCCAAACCGGATGAGAAAAGCC
ATTGAACAAGAAAATTGCTCCCCACTAGCCCACTCAGCAGTGGGCTGTTT
GCGAAGGTAATAAGTAGAACATGGCTGAGGACTGACAGCCTGGTTAGAGG
CTGTCGAGAGGGGTTTTCCCGCGACCTGGGTGGAAAACCGCAAACTTTTA
GCCCTTTCAAGTCGAAGCTGGATTCCAGTCCCACGTCGAGAACAAAGGCT
GACTCGGTCTTTGAGGGGGCTGAGTCCGGATTTTCCGCTTAAGCTCTAAT
CTCATTTTGACCACAATTAGTCGGCAAAAATAGTGCATCCGGGCAATACT
CTCGACGGGATGGGAACATGAAACCAAGGCCGGGGAATGCGAGTGAGAAC
GAATACAACTTGCCTGATCCACTTTCAGTTCCCCCCAAGAAGCCCGTGGT
CCACGACGAAAATGGCCGCAAGATGTCCTCGACCTTGGGCCCTTACAAGG
TTGGCCAAGAACTCATCGCCACTTGCGTCACCTCTGGAGGTAAGTTACTC
TAA

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