maker-scaffold275_size226830-snap-gene-0.24-mRNA-1, maker-scaffold275_size226830-snap-gene-0.24-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold275_size226830-snap-gene-0.24-mRNA-1
Unique Namemaker-scaffold275_size226830-snap-gene-0.24-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold275_size226830supercontigscaffold275_size226830:51426..54992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
activator of basal transcription 1maker-scaffold275_size226830-snap-gene-0.24Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:543maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:543Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:544maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:544Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:545maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:545Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:546maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:exon:546Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cds-1978984Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cds-1978985Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-0.24-mRNA-1:cds-1978986Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1978987auto1978987Tigriopus kingsejongensispolypeptide
Tk00619Tk00619Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00619

>Tk00619 ID=Tk00619|Name=Tk00619|organism=Tigriopus kingsejongensis|type=polypeptide|length=299bp
MVRSRRGTPSSPPAHRPTVAPKRRMARKKAGPALAPPPKAGLAGSKPRAR
VVSPFCMDDSSQEDDDIEDLDEGYNVTRTTEFFSAYGQIGRVFLQPDQAE
KSKEKVALRFTEGWIEFMSKRVAKDVAENVNCTPVGGKKKAQTHDIIWNI
KYLPRFKWSHLTERLNYEKATHHQKMRTEISAAKKEADFFKRKVDMSNKR
KYSKKAPAKAEEDQPAAASHSRYEFRLKQTDDEIRRQKQEKSDESRRGQS
PPAKKRRQRGSSGRVADGHQPVTRGSSSNGSSPDAIEDRKKFLASVFGM
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mRNA from alignment at scaffold275_size226830:51426..54992+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold275_size226830-snap-gene-0.24-mRNA-1 ID=maker-scaffold275_size226830-snap-gene-0.24-mRNA-1|Name=maker-scaffold275_size226830-snap-gene-0.24-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3567bp|location=Sequence derived from alignment at scaffold275_size226830:51426..54992+ (Tigriopus kingsejongensis)
ATGGTTCGCTCGCGCCGCGGCACGCCCTCGTCACCGCCCGCCCACCGCCC
CACCGTGGCGCCCAAACGACGCATGGCCCGCAAGAAGGCGGGTCCGGCCT
TGGCCCCGCCCCCTAAGGCGGGCCTGGCCGGGTCCAAGCCCCGCGCTCGG
GTCGTGAGCCCCTTCTGCATGGACGACTCGAGCCAGGAGGACGACGACAT
CGAGGACTTGGACGAGGTGGGCCCGCCCACCAACGCCCACATCTCGCCCC
CGCCCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCCCAGCCTGCGGAAGAAGCCGGGCATCATCTACCTGTCGTC
CCTGCCCAAGGGCTACAACGTGACGCGCACCACCGAGTTCTTCAGCGCCT
ACGGCCAGATTGGGCGGGTGTTCCTCCAACCGGGTAAGAGCCCAAGGGCG
CCTATTTGGGCCCCAGTATGAATTTATGAATTGAGCGCCTTTTTCGCCCC
CAGATCAAGCGGAAAAGTCGAAGGAGAAGGTGGCCCTCCGCTTCACTGAG
GGCTGGATCGAGTTCATGTCCAAGCGCGTGGCCAAGGACGTGGCCGAGAA
CGTCAATTGCACGCCCGTGGGCGGGAAGAAGAAAGCCCAAACCCACGATA
TCATCTGGAACATCAAGTATTTGCCCAGGTTCGTAGGCCGGCCGGCCGTT
CTCAGTCGGTGGGGGTGCCGATCGGGGCGGGCGCCGCCCTACGGGTCGAT
CAAGGCAGCCGGACTGGGTTGGCCGGAGTCACGGGGCGGGTGTAGAAGCA
CCCTGCCGGGAGCGTTTGTAGCCGTTTTGGGGGGGGGGGGGAAAGTGGGA
AGAGTCAGGGCTAGCCGGGCCAATATCCCTCGAAGGCATTGAGCTAGGTG
CCACCGGTGTACAGTCCGACATTGGGCCTGAGCTCCGGATTTCAAATATC
TGGGTAGCCGTTGAGCGTACGCTTTTGGGACGACGGGTGGGGTCACACCA
GCGAGATTCACCCCCGTTCCCGCCAGAGGCTCGGATCGCGTCTCCCGTGT
GATTGAATCGGCCTTCACTCCGGTTCAAGATGGGGCTCCGGTCTAGAGTA
CTTTGGACGCCGAGGACTCGACCGGGTGTCTCATATTGGCATTCACACTA
TTGGCCGTGGATTTTGGTTGTGCCCCAAAGTCGAATTTCACGCTCGCTTG
AACTTTGTTTGTTTGGCAGGCCCTAGGACTGGTCGGTATAGTACAATCAC
TTCCCAGTTAGCCATCTCCGAAGAGACATAGCCGACCTTAAGACTTTCTG
AAAATGGATTCTAATCCTTGGACCGAGTTCAAGAGAGTCATGGTTCGACC
CAGAAGGGACAAGACTACCTTGGCTCGCTTGAACTATTCAGATAACCAGG
GACGAACCATTGACGGTCCAGCTCAACTGTACATGACAGAATTTGTAATA
GCCTGCTTATTCCTCTTTGGGGTCGAATCCTTTTTGACAAGTTCATTCGC
ACTGTGGACTAGATTATCGGTTGTCCACTTTTCAATGTGGTCTGCCTGTC
CTCTGACTTCTTAACGTTGAACACGTGCAACCTGGCTCACAACGCAACTC
TACCAAGGCTTCGACATTTGGGTAATGGTACTCGACTCCTTGAATTGCCC
CATATGAAGAAGGCCATTCGGTTGGGTCTGAAAAGGCATAGGGTTGGTCT
TGACACCTGATGGCGCGTGCGTAGGGACCTAATTTCGGCAGGAAAATGTA
AGGCTCACCAGACCGGACCTGCTCATCCATTGTGACGTGACGAGCAGCAT
CTTACACTGGATTGGGTCAAAGGAGTTACCTCCAATAGGTGCTTTGCCCA
AATAACACTGGATCTGTCTAACTTGGTCCTGGCGCGGTCGCGCACACTTT
TGATCGCTGTCCTTGTCAGCGTTAGCCCTGGCTCTTGTGTGGGTTCAATC
TCCATAATGCCCGAGTTTTCGGTGTCTCTCATGGGTTAACATTGAAAGCG
GCATGCCTAATTTCTCCCTAATTTTGATGCCCGTTAACCGATTTTTGCCC
AGGGCCCCAATAGCGTTTCGAGGCAATTTCGCTTGAACTTGCCACATATT
TTCGCGGGAGTTATCATCCCTCATCCCGACTTTTCTTCGGCCGAAACAAA
AGCTCGAGCAATGAATCGCGACTACCAGAGTCAGCTTGATAATTTGGGAC
CCAAGCAGTTAACAACGTTGTTCGAAGAAAACGATTGCAATACACGCTTG
TGAAGTGGGATTACAATCAATTTAGCTGGAACAGCCTGTAGGTACAGTAT
CCAAATGCCCTGCGACGAGCTTGGTGGCCTATCCAGACTCATTGAAGAGC
CACATTAGCCATATAGTAGATGGCTCTCCTGGGGACTTTGAAACGCACAC
CCACGTCCCTATGGCCGATCCTCATGAACTTTGAGGTGGATGAAATATTG
GCAACGCATTCGCAGAACTCGACCCAGGATTCACGTTTCGCCTTCCGGTA
GTTGGTTTTGTATGATCGCCAGAGAACCACGTAATCCCGTCCAGAGCTAG
GGTTTTCGTCTGACAGGAATTGATGATGTCTAGGATAAGTTTGAAGTTAT
CTCACATAGCGTTGTGCCGAGCTCTGCCCTCTCTGGACTGTCCAAATCCT
TCAACTTGGAAGGTGATCATCTGGGATTGTATTTCATAGCCATGTTTTGT
CTCTCAGGTTCAAGTGGTCCCACTTGACGGAACGATTGAACTACGAAAAG
GCCACCCATCACCAAAAGATGCGAACCGAGATCTCGGCGGCCAAGAAGGA
GGCCGATTTTTTCAAGCGGAAGGTGGACATGTCGAACAAGAGGAAGTACA
GCAAGAAGGCTCCCGCCAAGGCTGAGGAAGACCAGCCGGCCGCGGCCTCG
CATTCGCGCTACGAATTCCGACTAAAGCAAACCGACGACGAGATCCGGCG
GCAGAAACAGGAAAAGTCAGACGAATCCCGCCGTGGACAATCGCCTCCAG
CCAAGAAGCGCCGCCAACGCGGCTCCAGCGGGCGAGTGGCCGACGGGCAT
CAGCCTGTCACCCGTGGGAGTAGCAGCAATGGAAGCAGTCCGGACGCGAT
CGAGGACAGGAAGAAGTTTCTGGCATCCGTCTTCGGCATGTGAGCAAGCG
TGTTCAGTGAAGTTCGTGCTCCTTCCATTCTCGCTGCCTGGGTCCGGACT
CCTTCTGTGGGCTCGATTTCAAATTGGAATCGCCTTCCGTGTTGATTCCG
GCGAGCGGTGCGATGAATCGGACGATATTCCTCCAGACGTTCAATCACAA
ACCCCTCTCCACACCCATTGCTCGTCATCCAAGCCCCCCTTGGACACGAG
GACACCTTTTGATGTGGTGCGATTTTCTCCCAAATGCAAAGCCGAAACGT
GTGCCCACAAAGCAGAGTATCTACTCTCTGAAGTATGTTATGATCTAATG
GCAACCATTATTACGGTCTGTGATGTAAATCAAGCAAAATCTCGTTGTGG
CCTCCTTCTAGGAAGGTGACAACCAGGATGTTATCATAATTGAATAAACA
TTGGCCAAACGCGTACA
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