maker-scaffold275_size226830-snap-gene-1.26-mRNA-1, maker-scaffold275_size226830-snap-gene-1.26-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold275_size226830-snap-gene-1.26-mRNA-1
Unique Namemaker-scaffold275_size226830-snap-gene-1.26-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold275_size226830supercontigscaffold275_size226830:185070..186648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein jagged-1maker-scaffold275_size226830-snap-gene-1.26Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:628maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:628Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:629maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:629Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:630maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:630Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:631maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:631Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:632maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:632Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:633maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:633Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:634maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:634Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:635maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:exon:635Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:five_prime_utrmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007410Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007411Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007412Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007413Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007414Tigriopus kingsejongensisexon
maker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cdsmaker-scaffold275_size226830-snap-gene-1.26-mRNA-1:cds-2007415Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2007416auto2007416Tigriopus kingsejongensispolypeptide
Tk00636Tk00636Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00636

>Tk00636 ID=Tk00636|Name=Tk00636|organism=Tigriopus kingsejongensis|type=polypeptide|length=369bp
MIWFLLLLVPLSLAQPRGGPRGLLLTPLRIEELPCVAENLRESYRYICDD
EANVICLSGWMEKPNGDDRDIRNPCPIPICDYQGETCSHGECVRPDVCAC
DVGWAGHLCNHCIPLPGCQHGSCNGTLECNCDSNDDGLALWEGAFCDQPA
CPDCDPSHGFCFQPFACQCFEGWEGEDCQECVKLPGCLHGDCEGDHPHTC
ECEEGWTGHLCDQPICSVGCHPEHGFCFEPDTCICQTGWQGDTCAQCVSY
WTCPSSGECIEPNQCICDSDAVADDNENVCNRDRINGPMHAQDYTECSVP
CAPFTAFEVSSEALITGNQTRACLWGEEQDLCEPIVRNCQGTQLWAVDTN
MVDDNLDFELCLFYDPNSD
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mRNA from alignment at scaffold275_size226830:185070..186648+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold275_size226830-snap-gene-1.26-mRNA-1 ID=maker-scaffold275_size226830-snap-gene-1.26-mRNA-1|Name=maker-scaffold275_size226830-snap-gene-1.26-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1579bp|location=Sequence derived from alignment at scaffold275_size226830:185070..186648+ (Tigriopus kingsejongensis)
AGCACGCATTCATCCCAGAGTGAGCCACCATGATTTGGTTTCTTCTCCTT
TTGGTCCCATTGAGCCTAGCCCAACCTCGGGGAGGGCCTCGAGGCTTGCT
CCTAACTCCCCTTCGCATTGAGGAGCTGCCTTGTGTGGCCGAGAACTTGA
GGGTAAGTTCTGCTACATGATAGGATCCTGGAGTCCGTGTGACCTATGCC
GTTGGGCATTTCAGGAATCGTACCGCTATATATGTGACGACGAGGCCAAT
GTAATCTGCTTGTCTGGCTGGATGGAAAAGCCCAATGGAGATGACCGGGA
CATTCGGAATCCTTGCCCCATTCCCATTTGCGACTATCAGGGCGAGACTT
GCAGCCACGGTGAATGCGTCCGTCCGGATGTGTGCGCTTGTGACGTGGGA
TGGTGAGATACGATGGCAATCCCTAAGGAAAAAGAGCAACTCACCCTGAC
ACTTATTCTCTTAGGGCCGGACACCTGTGCAATCATTGCATTCCTCTGCC
TGGATGTCAGCATGGATCGTGCAATGGCACCTTAGAATGCAACTGCGACT
CCAACGACGACGGCCTGGCCTTGTGGGAGGGTGCCTTCTGTGATCAACGT
AAGCGACCAGATGGAAACCAATGAATTGGGCCACGTTAATTAGAAATGTG
GCTTCTTTCCAGCGGCTTGCCCGGATTGCGACCCCAGCCATGGATTCTGC
TTCCAACCCTTTGCATGCCAGTGGGTTTTCGAACTGAAGTGACGCTCCCA
GTTCGTGTCACGGCTGACTCTGCTTGCTTTTCCAGGTGCTTTGAGGGCTG
GGAAGGCGAGGATTGCCAAGAATGTGTCAAATTGCCGGGTTGTCTCCATG
GGGATTGTGAAGGCGACCACCCTCACACTTGCGAGTGTGAAGAGGGGTGG
ACCGGTCATCTCTGTGACCAACCCATTTGCAGGTAAGAGATCCTTCATAG
AGCCCTCTCAAGCTTCCTTCATTCTCTAACCCTGCCTCATTCCAGTGTGG
GATGTCACCCAGAGCATGGATTCTGTTTCGAGGTAAGGGCTGAGGGGTGA
GTGAGTTCCACTTTGGGAGAGGTAAACGATTTCCCACTTTCAGCCCGACA
CCTGCATTTGCCAAACGGGATGGCAAGGCGACACTTGCGCCCAATGCGTG
AGCTACTGGACCTGTCCCAGCTCCGGGGAGTGCATCGAGCCCAACCAGTG
CATCTGCGATTCAGACGCAGTTGCGGATGACAATGAGAACGTGTGCAACC
GGGATCGCATCAACGGTGAGTGCTCACCAGAGAGACCTGTGCCACAATTG
GCACCCCTATTCCATTGACCCTTTTTACCAGGTCCAATGCACGCACAAGA
CTACACCGAGTGTTCGGTCCCTTGTGCACCCTTCACTGCCTTCGAGGTCT
CAAGCGAGGCACTCATCACCGGGAATCAAACCCGAGCGTGCCTCTGGGGT
GAGGAGCAGGATCTGTGCGAGCCCATCGTCCGAAATTGCCAAGGCACGCA
ACTCTGGGCGGTTGATACAAACATGGTTGACGACAATCTGGATTTTGAGC
TTTGTCTCTTTTACGACCCCAACTCAGAT
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