maker-scaffold282_size228295-snap-gene-1.23-mRNA-1, maker-scaffold282_size228295-snap-gene-1.23-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold282_size228295-snap-gene-1.23-mRNA-1
Unique Namemaker-scaffold282_size228295-snap-gene-1.23-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold282_size228295supercontigscaffold282_size228295:223243..226224 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
corepressor interacting with rbpj 1maker-scaffold282_size228295-snap-gene-1.23Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:exon:87maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:exon:87Tigriopus kingsejongensisexon
maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:exon:88maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:exon:88Tigriopus kingsejongensisexon
maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:five_prime_utrmaker-scaffold282_size228295-snap-gene-1.23-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold282_size228295-snap-gene-1.23-mRNA-1:cdsmaker-scaffold282_size228295-snap-gene-1.23-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2011456auto2011456Tigriopus kingsejongensispolypeptide
Tk05523Tk05523Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05523

>Tk05523 ID=Tk05523|Name=Tk05523|organism=Tigriopus kingsejongensis|type=polypeptide|length=277bp
MGKGFNNYMCKKFFHPASKDNLKRVWMAQQKTDAEQKKQDDLKQQYEREQ
ELYNNRALLSKDSKEKLEVNFLYEPPPGARKEDREREDGEESGFKFEWQR
KWGTAPRESWAKGDESIRDQPFGIQVRNVRCVKCHKYGHINTDKECPMYG
KALDSEAPADRIDQQRLLEEMKEDGMKMRWSAWDIDDPRSSSKYQMLEDP
QARARQARADKLESEMEQKRRMIQSLSKDEKRKLLKKLEREDRKKTHRHK
EKRDKKDKKDKKGKKSKRSRRSSSRSD
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mRNA from alignment at scaffold282_size228295:223243..226224+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold282_size228295-snap-gene-1.23-mRNA-1 ID=maker-scaffold282_size228295-snap-gene-1.23-mRNA-1|Name=maker-scaffold282_size228295-snap-gene-1.23-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2982bp|location=Sequence derived from alignment at scaffold282_size228295:223243..226224+ (Tigriopus kingsejongensis)
ACCGTCACGACGCAGTGGACGAAGAATTGACGAACACTGAAAGCTTCCGA
CGTTGTGGCTCCGGATCCAGAGTGGTGAAGCTCGAGCCCCGTCCGCGTGA
CCCCCGTTGCGAGCCCGGCCACCCCCCGACCCGGCAGCATGGGTAAAGGT
TTCAACAACTACATGTGCAAGAAGTTCTTCCACCCGGCCTCCAAGGACAA
TCTCAAGCGGGTCTGGATGGCCCAACAGAAGACGGATGCCGAGCAGAAGA
AGCAAGACGACCTCAAGGTGCGGCTCACTCGCTCAACGGCGCGCGGGTTT
TCAGCGTGGGGCTCCTCGGTGGCTCCTCGGTGGCTCCACGAGCCCCGTGG
TCCCCCGACTAGCCTCGGCCCGGGCGGCTCGCTGACGGACGTCCGGCTAG
CTCGAATGCTCCTCTACGGGCTTGGGTAAAGGTCGGGGAGGGATAAGGTG
GGGGATGGCGGTCGTGCGCCCAAGCGGTTTCGTAGACTAGCGCTGCGGCT
AGGGTAATTATAGCGTAGCTTAGCTAGATTAGCGCTGCGGCTAGGGTAAT
TTGAGCGTAGTTGACATACTGTTAGGTTAGGTCGGGTCAGCCGACCTAAT
GCCTTTTTTACACTATTTTACACTACAGACCGAACACAGATGAGCTTAAG
TGTTGACTTGACATTAAAATTTGATTGCCCAATCTGTTAGGTTAGGTTAG
AGCGGCTGAGCGGTTGTCCTTAAGGTCCGACTACGGGCTTGGGTAAAGGT
CGGGGAGGGCGGTCGTACATCAGTGCTAACATTAAACCTGAGCCGACCTG
ATGCCATTTTTGGTAGAATTTCACTTTAGGGCCACAGTTTTCAGAAAGCG
CCACCAGGGGGCGCCGCATAGTGAATACGGGTGCGGCCAAATCTTGAGGA
AAGGTTAGGTTAGGCACTCTGGGCTTAGCAACGGTGGTGGCCATGTGCCT
GGTTGCTGCGTGGCAATGCCTCAGTCCCAATATTTTTCAGACTTCCCACT
TTCCCATGGAAATGAGCTGACACATAATGATTGGAGATTGAATGGTGAAG
TGGTCAGCGAAGAAGCCTGCCGGGCTCAAAGGCCGCAGATCGATTCCCGG
GCCCGGCGGATAAAGAAATTTTTCGCCACTCCAGACTTTCTTCTTCTGAG
GGGAGTGAATGACGACTCCCTGTCACCTTAGTCGTTCAAAGGTCAGGAAA
AACAGGTGCGGCCACTGCTTGAGGAAAAGTCCCTTCTGGTTACCCCACTA
ATTAAAGTAGTGGTTGGAGCTGGATTGCACGGGGCTGCACGGCGACTAGC
TAAATGAGCTAATAACGTCAGTGGGCCCTGTGTGTTCACCATGGGGGTTC
CATGGTGTAGAACACGAAACCACCGGAAGGTGCGATTACACACTCACACA
TAGGAACGGTCTGTTTAGAGGCCAAGAAGTCGAAACGTGAAAATGCATCG
GGTGTCCTTAAGGTTCGAACAATAGGAATTGACATTTTACCTTATTTGTA
TGCAGTTTGACCTTTCTGTACCAATTTATTTGGATTTGTGAATTGCTCTG
TTTGCAACCAGGAGTTGGCTGGGACGGTAAGAATGCTACAAGTATTCCCC
TGAGTGTTGCAGCCTGTAGCGTAAACATATCCAATGGTATTCATCATCAT
TCTCCACTCCATTAGGCAGCTTGTTCATAGTTTATGTTTTCCATGGTTGG
TGTTATGAATAACTGTTGATAGATAACTATGTTCTATGTTGGATACCAGC
TCAACAAGGAGTCTTCCAGTTACTTCGGCGCACGACCGCCATCCACTACC
TTAACTCGGGCGGGTGAGCTGCCCGCCGCCCTGGGTCCGCCGCTCATCAG
CCTAGAGCCCGGGCTCCAGACTGATGAGCGGCGACTCTGTCCAGGTGGAG
GACAGGCGCCTGGATGTATGCGTGGCCCCCGGGCCTTCAGTCCGAGTGGG
CGGGCCTGTATGTCAGTGCTAGGCCTCGGTTTCGGCGGGCTGAGCAGCCA
CACCCATCCGGACTTCAATTTGGGTGGCATTCGCGGGGGGGGGTGGGCCC
GAAAAAAACGCTGGCTGGTCTGCCGTGAGCGGAAATGCGAGACCGTGAGG
CGGCGGAATCTGGCGTCGCCCCCGAGGGGGCTACCCGCCCATCAGACTGG
GTCCAACGCGCTGGAGCTCTAACCTCTTCCGATCTCGCTTTCAGCAACAA
TACGAGCGCGAACAGGAGCTGTACAACAATCGGGCCTTGCTCTCCAAGGA
CTCCAAGGAGAAGTTGGAGGTCAACTTCCTCTACGAGCCGCCGCCGGGCG
CCCGCAAGGAGGACCGGGAGCGCGAGGACGGCGAGGAGAGCGGCTTCAAG
TTCGAGTGGCAGCGCAAGTGGGGCACGGCGCCCCGCGAGTCCTGGGCCAA
GGGCGACGAGTCCATCCGAGATCAGCCCTTCGGCATCCAAGTCCGCAATG
TCCGCTGCGTCAAGTGTCACAAGTACGGTCACATCAACACGGACAAGGAG
TGTCCCATGTACGGCAAGGCCCTGGACTCCGAGGCTCCGGCCGACCGGAT
CGACCAGCAGCGCCTGCTCGAGGAGATGAAGGAGGATGGCATGAAGATGC
GGTGGAGTGCGTGGGACATTGACGATCCGCGCAGCTCGTCCAAGTACCAG
ATGCTCGAGGATCCCCAGGCCCGGGCGCGTCAGGCCCGGGCCGATAAGTT
AGAGAGCGAAATGGAGCAGAAGCGCCGGATGATCCAGAGCCTGAGTAAAG
ACGAGAAGCGGAAACTCCTCAAGAAGTTGGAGCGAGAAGATCGGAAAAAG
ACTCACCGGCACAAGGAGAAGAGAGACAAGAAAGACAAAAAAGACAAGAA
AGGCAAAAAGAGTAAGCGGAGCCGCCGGAGCTCTTCGAGGAGCGACTAGG
ACTAGTCGGTTGAAGGATGTAATTGTTGTCACTACTCTATGTTAATCCAC
TCTTATCAAATATACTTTGCTCACCCCTTGGA
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