maker-scaffold291_size219542-snap-gene-1.21-mRNA-1, maker-scaffold291_size219542-snap-gene-1.21-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1
Unique Name	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold291_size219542	supercontig	scaffold291_size219542:196539..201297 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
40s ribosomal protein sa	maker-scaffold291_size219542-snap-gene-1.21	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:92	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:92	Tigriopus kingsejongensis	exon
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:93	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:93	Tigriopus kingsejongensis	exon
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:94	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:exon:94	Tigriopus kingsejongensis	exon
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds-2008793	Tigriopus kingsejongensis	exon
maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds	maker-scaffold291_size219542-snap-gene-1.21-mRNA-1:cds-2008794	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2008795	auto2008795	Tigriopus kingsejongensis	polypeptide
Tk04632	Tk04632	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold291_size219542:196539..201297+

protein sequence of Tk04632

>Tk04632 ID=Tk04632|Name=Tk04632|organism=Tigriopus kingsejongensis|type=polypeptide|length=316bp
MPCDFNRGLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGV
NIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGA
TSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIG
FANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWE
VMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSN
EPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAP
TPVDQANQWGGGNSWN

mRNA from alignment at scaffold291_size219542:196539..201297+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold291_size219542-snap-gene-1.21-mRNA-1 ID=maker-scaffold291_size219542-snap-gene-1.21-mRNA-1|Name=maker-scaffold291_size219542-snap-gene-1.21-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4759bp|location=Sequence derived from alignment at scaffold291_size219542:196539..201297+ (Tigriopus kingsejongensis)
ATGCCATGCGACTTTAATCGGGGGTGAGTTTAAGTTCAGCGGGGTGGGAT
TGGGGTGTTTGTGACTTTGGAGGCGGGGGGTGGGGACGAGCCCCCCCCCC
CCACTCCGTTATCCCCAGACGGCAAGGTGGTCTGCTCGAGTCATGACCCA
TGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTACTTAACAAAAC
AGTCACACAAAACAGACAAAATGCACGGAAACATAACTTCACGGGAACAA
AGTTATCCAGAAACAAACGGATGAAAACAAAACTTATTTAGAACAACACT
GCATATCGGAACCGCGGTGAGATGCAAAACGTGCAAAAATAACTATAACA
ACGTTACAGGGTTGGCCACATAAAACCGGGCATTAATTGCTAGTAATAAA
AAAATCATAGTATCCTTGTCCCAGAAGGAGGCAAAATTGGCCTCGCACAC
CTCCCGTGTGACGCAGGCCTGGTGCCAGGCCAATTTTGCCTCCTTCTGGG
ACAAGGAGACCTGGCCACCTTCCTCTCCGGACCTTAACCCAATGGACTTC
TCTGTCTAGTCCATTCTGGAGAGGAAGGGGGGGGGTAAAAAATTTCCCAA
ATGTTAATGCCTTAATCGAGGCCTTGTAGGCTAAATGGGAGGAAATACCA
GCAGACACGGTGCGGCGAATTTGTGCTGAGGCTAAAGAAAGGTTCAAGGC
TGTGGTGAAAAATAAAGGCTCCTATGTGGAATAAAAATTTGTTCGAAGAG
CGTTTGGAATGTATATCAAAATTGTTTAAAAATGGATTTTGTAGAAAAAA
TAAGTTATATGATTTTTTATTACTAGCAATTAATGCCCGGTTTTATGTGG
CCAACCCTGTAGGTAAATTACGCTCAAGTTAAGCTAGGCACAGCGCTAAT
CTAGGTCAACTACGCTCGAATTAAGCTAGCCGCAGCGGTAACTTAGGTCA
ACTACGCTCGAGTTACCCTAGCCGCAACGCTAGTGTACGAAACCCCTTCG
GCGCACGACCGCCATCCCCTACCTTATCCCGTCCGAGGATGCGGAAAAAT
CTCTTACGGTACATTTTTGACACTCACAAACTCTCAGACTAACTAATGGC
CGATTACAGGAGTCCGACATCACCAAGATGTTGGCGGCCACCACCCACGT
GGGCTCGGAGAACTCTGAGACCACCATGGAGCAGTACATCTTCAAGAAGC
GCTCGGATGGCGTGAACATCATCAACATGAAGAAGACCTGGGAGAAGCTG
CTCCTGGCTGCTCGGGCCATCGCCGCCATTGAGAACCCGGCTGACGTGTA
CGCCGTCTCTTCGCGTCCCTACGGACAGCGAGCCGTCCTCAAGTTTGCGC
GCTACGTGGGCGCCACGTCCATTGCTGGACGTTTCACCCCGGGTAAGTAG
GATAAGGGATCGGGGTCACGCCGGTATCCCGGGGACTGAGAACGTGATCG
AGGGCTCTGGTATTGGTTCAAGACGAGGGCTGGATTGCCCTCTTTTTTTT
TGATTGTGTGACATGTCACTATGTCGGTTATGTTCTACTTTAGCCCCAAG
AGGTGGCGTGGGATATTTTCCCCCATTGCGCAGTGAGCTTGACCACTGAG
AGTGGCCTAAAATCTGCCAACCTTCGCCAACAATTTTAGCCCTTCGTAGG
GGCCTTCTTAATTCTCGTCCAAAGAACGAGGAGATTTGTGACAGGCTAGA
TATTGTGGGAAATGGCCAGTTACTCAGATTGGTCCAGATCCCGCACTCAA
ACTCAGTAATCTTTACAGAGTTGGGATGAAAATGTCCTGGGGTCTTTCAT
TATGGGAAGAAAGTGTTTGTTGAGTTTAAAGTTTAACCAGCTGAGGATGA
GTGCTGGGGTTGGATGATCGCATTAAATTCGCGACCATGTTAATCACTGG
GTTTGATGTTCACAAACTGATTGCCATAATTGAAGAATTAGGCAACAGGA
ATGGCCAAGATTTGGACGGAGGTGAAGAGGTGGATGGCCATCTGAACCTC
TTTTTTTTAATATTCGATCGATCCCTGGTCACTTGGATAATAACTACGTT
GGTCGGGCTGCTCACAGCACCCAGGCACGCAATGTGGGAATGTCTCTCGC
GCAACCTCTTGGGGCTGAACTAGAACTTTACTACTATGTCCACCTGATAA
GGCTGCCTGGATTGGTCAGCCAGCCTGGTATCGCCTTACCGAGGCTGGTA
AAGGTGGTAAAGGTAAAGGCTACCATGGAAAGTGAAAACCATGGTCTGCC
CCAGTTCTGGGACGTTTTGGCTTGGGGCCCCATACTGCCCGAAGTGGGTA
CCGGGGTGTCCTGCTCCGGTGTAACTAACGGGGTGCGGTTATGTTCTCGG
TCCCCTGACTGCCCGGGGTTAGCTCACACCCTCCTTCGCCACGCTCATCA
CGTCCGTCCGACGCGAAATCGAGTGCCATTATCGTGATCTACGGATCACG
TTCGGGAGAAAAGCCATTCGGCCCTATAGGAAGCACGCCGGGCCCGCATG
GCCCGGCGTGTGCCGTAAATAGCGGTCACAAACTGACATATCGCTGGACT
AGCCGGTGGTTCGCACCTCATTCCAAGTGGTAGGCTGACCCGGGCTTCGC
CGTCTTTCCAGGTGCGTTCACTAACCAGATTCAGGCCGCCTACCGCGAGC
CCCGTCTGCTGGTGGTGGCTGACCCCCGAGCCGATCATCAACCCGTCACC
GAGGGTTCGTATGCCAACATTCCCATCATTGGCTTCGCTAACGTGGATGC
GCCCACCAAGCACATCGACGTGGTCATCCCGGGCAACAACAAGAGCCCCA
ACTCGATCGGTCTCATGTGGTGGTTCTTGGCCCGTGAGGTTCTGCGTCTG
CGCGGCTCCATCTCTCGGGACATGCCCTGGGAGGTCATGCCCGATCTCTT
CTTCTACCGCGACCCCGAGGAAGCCGAGAAGGAGGAGCAGGCCCGCCAAG
AGTCGCTGGCTCAGGCCGCTTCCCAGGTCAAGCCCGCCGAGCCCGAGAAC
TGGGGTGAGGACATGAACACCGATTGGTCCAACGAGCCCGCTCCCGGGGC
CGCCCCGGCTGCCGGTGGTGCGGCTGCCGCTCCGGCCGCCGCGGCGCCCA
AGTTCCAAGTGAGCGAGGACTGGTCCGCCCCCGTCCAGCCTTCCGACTGG
GCTGCCGAGACGCCCGCCGCCCCGGCTGCGCCCACCCCCGTGGATCAAGC
CAATCAATGGGGTGGCGGCAACAGCTGGAACTAAAGCGGCTTCAGCCCCC
GGCATCCCCCGCGGGGATGCGCAGTGGCGTTGCGAGTGTCGCTGACTCAG
CCTGAGCACTCTATGTATTAATATAAGTTGTTGACCGAATCAGTTGCGCT
TGAAATACA

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