maker-scaffold299_size217019-snap-gene-1.35-mRNA-1, maker-scaffold299_size217019-snap-gene-1.35-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold299_size217019-snap-gene-1.35-mRNA-1
Unique Namemaker-scaffold299_size217019-snap-gene-1.35-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold299_size217019supercontigscaffold299_size217019:212872..216588 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
wd repeat and hmg-box dna-binding protein 1maker-scaffold299_size217019-snap-gene-1.35Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:855maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:855Tigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:856maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:856Tigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:857maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:857Tigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:858maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:exon:858Tigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:three_prime_utrmaker-scaffold299_size217019-snap-gene-1.35-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cdsmaker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cdsmaker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cds-2010440Tigriopus kingsejongensisexon
maker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cdsmaker-scaffold299_size217019-snap-gene-1.35-mRNA-1:cds-2010441Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2010442auto2010442Tigriopus kingsejongensispolypeptide
Tk09201Tk09201Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09201

>Tk09201 ID=Tk09201|Name=Tk09201|organism=Tigriopus kingsejongensis|type=polypeptide|length=973bp
LAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTAL
AVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEP
EFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKG
KYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFL
ASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQG
YWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDN
ENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLA
PVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSI
EVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCR
LLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQW
EILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHP
AGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQIC
DTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFA
LPLCEAATEKGVLEEELWKCNLLSRALRGSEPLAEVEETQSRCLIKLFAL
AMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQ
EEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRN
LLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDTVFDDMTLK
SQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS
PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQYRS
PRVPKRKSEDELTASPASKLLKV
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mRNA from alignment at scaffold299_size217019:212872..216588-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold299_size217019-snap-gene-1.35-mRNA-1 ID=maker-scaffold299_size217019-snap-gene-1.35-mRNA-1|Name=maker-scaffold299_size217019-snap-gene-1.35-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3717bp|location=Sequence derived from alignment at scaffold299_size217019:212872..216588- (Tigriopus kingsejongensis)
GTCCGACTCTACCAGGGGATCGACGATGACGACCCCATTTCCCACTTGGC
CGGTGACGAGACTCTGGCCGTGGCCGTGACGGATGAGCGCTTTTTCGTGG
CCGCATCCGGCACCAACACCATCCAGGGCTATTCCTTGGCGGAGGGCCAG
TCCGAGGGCGTCATCACCCGCTTCACGGCCGACGGCACGGCATTGGCCGT
GAGCGGGGATGGGCGATATCTCTTGGCCGGCTCGGACGACATGACCGTGA
AGCTGGTGGACACCCAGACCTACAAGGATCACGTGTTCCGAGGGCACGAG
GCCCCCATTCTGAGTGTGGCCCTGGACCCGAGGGAGAGCGAGCCTGAGTT
CGCCGTCTCGTCCTCGTGCGATGGGACCGTGCGGATTTGGAACATTGCCG
GCGAGAACGAGATCCAGTGCGTGGACGGGCTGGCCAAGGCCAACGATCTG
TCCACGGCCAAGAGCCCGGGAGTGGTGGCCTTGCATCCGAAGGGCAAGTA
CCTGGCCATCCCCATGGAGAGCAGTGTAGTGATCTACGCCCAAGAGGACG
GTTGGACCAAGGTCTGGACGCGCCTGAGTGCGCCCAATCCGCCCAAGGAC
GAGATCATGGGAGTGGTGGCCTGGGCCAAGGATGGCGACTTCTTGGCCTC
GGCCACCTCGACCGGGCGGATCTTCATTTGGGATTTCTACGACAAGTCCC
TGGCCTTCGAGACCAAGACCACACGCGGCTACGGGATCTGCGATCTGGCC
TGGCACCCGAGCAAGTACGAGCTGGCCATCATGGACAGCCAAGGCTACTG
GGGCCTGATTGACAAGATGACCTTCGTCGAGGACAACGAGGAACAAGACG
TGGAGGAGGAAGAAGACGTCACTAAAACGACTCACGACGAGGGCGACCTC
GACGCCGATCAACTGGCGGCCCTCATGGAGGTAAAAAACCCACTGGATCC
CACGAAGAGCGCAATGATTGTTTATAGGGGGAATCTACCAATCATTTGAT
GTGTTGTTTTTTGGCCATTTCGAGCAGGGGGAAATGATCACATTTGACAG
CAGTGCGGGTCAGTGGTTCAGACCCACTCAGACTGGGTTTCGAACCGACC
ACTTGGTTCGTCAATTGCAATTTCTTGCACTACTTGAAAACGTGCGATTT
TTCCCATTTTTGATTGCATACTTCGGTGTTTTTTCCCCCATATTTTGAAC
TTCCCCAGTTTTGCTGTTTTGAACTTCCCCAGTTTTGCTGATGCTAAAGA
TGTAGCTCCGTTTCAGGATGACGACGACAACGAAAACTCCTTCTCAATCC
GGAAGATCAAGCGGGACACGGGATTCCTGTCCGAGGACGACAGCAACATG
TCCAAGCCTCACTTCCGGGGCGAGGACCAGGAGCGTGGAGTCGAGCCCGT
GGATGCCCCACCCACCTCTGGCCTCCTCGCGCCCGTTTTGGGCGGGGATC
CTCACTACCAGGTGGACATTCAGCCGCCCTTCCAACCCACGGCCACGCCC
ACGCGCCTCTCGTCCCGCTTCATGGCGTGGAACTCGGTGGGCGTGGTCAA
GTGCTTCAACAACAACGAGGAGAACTCCATCGAGGTGGAATTCCACGACA
CGGCCATTCATCACTCGTTCCACATCACCAACGCGCACAATCACTCCATG
GCGGACTTGAGCCGCTCCTGCCTCGTGCTCGCCAGCGAGATAGCCGAGGA
TGACCCGAGGGCGAGTCGAATCACCTGCCGGCTCCTGGCCTCCTCCGACC
TCAGCCCCGAGTGGTCGATCGAGATGCCACCCAAGGAGGAGGTACTGGCC
ATCTGCTGCGGTCGGGACTGGCTGGCTGCGGCCACGGATCGACGCCTGCT
CCGCATCTTCTCCTCGGGCGGGAACCAGTGGGAGATCCTCGCCCTCCCCG
GTCCCATTCTAGCCCTGGCCGGCCACGAGAACTGGCTCATGGTCACGTGT
CACACGGGCATGGCTCTGCCCGGCTCCCCCTCCGTGTCCTTCGCCGTCTT
CGATCTGCGGAAATCCGGACGGCGCCACCCGGCGGGGAGTTTCACGCCGC
TGCCCTTTGCGCCCAATACCGAGCTGGTCTGGATTGGCTTCTCGGACGAG
GGCACGCCGGGCATGATGGATAGTGCGGGCCAGGTGCGGCTGCTCCACTC
CGGCTTCGGAGCGTGCTGGACGCAGATCTGCGACACTCGGAGCGGCTTGA
AGACCAAGAGCGACCATCACTTCCTCGTGGGGATTAGCGAGCAGGAGCAT
CAGGTGCGAACCATCCTCTGCAAGGGAGCCACCTATCCGGGCACCACGCC
CCCGCCCACTGTTGCTCTCGTCCCATTCGCCCTCCCCCTCTGCGAGGCAG
CCACGGAGAAAGGCGTGCTCGAGGAGGAGCTCTGGAAGTGCAACCTGCTC
AGCCGGGCCCTGAGAGGCAGCGAGCCCCTGGCTGAAGTGGAGGAGACGCA
GAGCCGCTGCCTCATCAAGCTCTTCGCCCTGGCCATGAAGAACGACCACG
AGACGAGAGCCCTGGAGATCTGCAAGCTCATGGACGCGGCCACGATTGGA
CTGGCCATTCGCTACGCCTCCTCCAATCGGAGGATGCAGTTGGCTCAGCG
GATATCCAAGTTGGCCAACGACGCCCTCCAGGAGGAGCAGGAGCAGCAAC
GGGCTCAAAGTCAAATGAGTCACGCCGACATGTTCGAGGATCAGGGCGGC
GACGAGCAGGCAGAGGAGGAGGAGGAGGACGACACCAACGCCCCGTCCAA
TCCCATTCTGGAGGCCAAGATGAAGCGGAACCTCCTCGGCAGCGGCGGCC
GGAGTCGAACCATCATCCCGGACAGTCAGGGTGATGCGGGCCGCAATCCC
TTTGCTCGCAAGTCAGTGCCCAACACGCCCAGGTGAGCCCAAGTTAATCC
TTTTAACCGAGGAAGAGTGCCAAGCCACGATCTGGGTTTGGGAATGTCCT
AGCTCAGTAGCTCAAGTCGGTCGGCTTTGAGCAGCCTCAAGTCGGTCAGC
TTGAAATCCCTGCAAGGAATCGGAAGTTGAGCGAGCTCGGCTAATGGACG
GATTCCCTGCCGATGCTAGTCAAAAATGGTCAATTGCAAAGTTTCCAAAC
AAAATGATCGTCACAGCAATTGATCAGCCCAATTATTTCCAGTGGTGCAA
TACGGAAGGGGGACACGGTGTTCGACGACATGACGCTCAAATCCCAGTCC
AGTCGGAATCGCGGCTCATTCGGGGACCGCAAGTTCAAGCCGGGTACCGG
GATCAAGGTCAAGCCCGCCTTTGGCAAGCAGAGCACCATCGTCCTCAAGA
AAACCGTGCCAGCCAAAGACAATGGCGCTCAAGCGCTCTCGCCACTCTCC
GGATTTCAACTATGGTTGGCGGAAAACCGCGGCCAAGTGGCCGCAATTTG
CGACTCCGGCACCGAGGACTCGGCCATCAACATCAAGGGCCTCGAGGTGA
GATCTTCGGATCTATTGTGGTTCTAAGCTAGTCCTTAATAATACTGAGTG
CACTCCTCTTGCAGATGTGGAAGCAATTGAAGAAGGAGGACAAGGATCAG
TACAGGTCGCCCAGAGTGCCCAAGCGCAAGAGCGAGGACGAGCTGACGGC
GAGTCCGGCCTCCAAGCTCCTCAAGGTGTAACCCCACCTCGAAGGGTGTT
CCCTAGACTACTTATTCATCATATGTTCGTGTGTTTTTATAGCAATTTGA
CTTAGTAGTGTAAGAAG
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