maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1, maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2_size2283618-snap-gene-15.47-mRNA-1
Unique Namemaker-scaffold2_size2283618-snap-gene-15.47-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2_size2283618supercontigscaffold2_size2283618:1501764..1503395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
choline dehydrogenasemaker-scaffold2_size2283618-snap-gene-15.47Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:exon:1028maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:exon:1028Tigriopus kingsejongensisexon
maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:exon:1029maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:exon:1029Tigriopus kingsejongensisexon
maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:cdsmaker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:cdsmaker-scaffold2_size2283618-snap-gene-15.47-mRNA-1:cds-2021787Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021788auto2021788Tigriopus kingsejongensispolypeptide
Tk00075Tk00075Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00075

>Tk00075 ID=Tk00075|Name=Tk00075|organism=Tigriopus kingsejongensis|type=polypeptide|length=443bp
MSEHFDFIVVGAGSAGCVLANRLSACGKYSVCLLEAGGSDWRFFVQVPIG
YGKTYYQRAVNWMFHTEDEPGLGNRPSYWPRGKVLGGSSSINAMVYIRGH
RQDYDDWAALGNPGWSYDDVLPYFIKSEGNPQGDLNFHGRHGPLRIDDQR
AQMHPLIDTFKQAGAALGLKVSDDFNGAQQSGIGAYQCTVHRGRRMSASR
AFLRPAMKRPNLTVITRAHTTRVLFEGKRALGVEYKRAGKLQQVFAQREV
ILSAGAVNSPQLLMLSGVGASEALQSQGIKVMHESPAVGQHLQDHLGIDL
ILKTRVKTLNDTLHPWWGKLLAGVRYLTTLSGPLSLSLNQGGGFMRTQPE
LKQPNLQLYCSPLSYTRAPAKTRPLMNPDPFSAFMLGLSNCRPKSTGSIT
LRSADPFDNPIIHANYFSAPEDMQELKAGTRFLRQMDAENPDN
back to top

mRNA from alignment at scaffold2_size2283618:1501764..1503395-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1 ID=maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1|Name=maker-scaffold2_size2283618-snap-gene-15.47-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1632bp|location=Sequence derived from alignment at scaffold2_size2283618:1501764..1503395- (Tigriopus kingsejongensis)
ATGTCTGAACACTTTGATTTTATCGTGGTGGGTGCTGGTTCGGCCGGTTG
CGTGCTAGCCAATCGTCTCTCTGCCTGCGGCAAATACTCAGTTTGTTTGC
TTGAGGCTGGCGGTTCTGACTGGCGCTTTTTTGTGCAAGTCCCCATCGGC
TACGGCAAGACTTACTACCAACGAGCTGTCAACTGGATGTTCCACACCGA
GGACGAGCCAGGTTTGGGTAACCGCCCGAGCTACTGGCCACGTGGCAAGG
TGTTGGGCGGGTCTAGCTCGATCAATGCGATGGTCTACATTCGCGGGCAC
CGGCAGGACTACGACGACTGGGCTGCTTTGGGGAACCCCGGGTGGAGCTA
CGACGATGTGCTGCCTTATTTCATCAAGAGCGAAGGCAACCCGCAGGGCG
ACTTAAACTTCCATGGTCGCCACGGCCCCCTGCGCATCGACGACCAACGC
GCGCAGATGCACCCGTTAATCGACACCTTCAAGCAGGCCGGTGCAGCTTT
GGGCCTAAAGGTCAGTGATGACTTCAACGGCGCACAACAATCGGGTATTG
GTGCCTATCAGTGCACGGTTCATCGCGGTCGCCGTATGTCCGCATCGCGC
GCTTTTTTGCGCCCCGCCATGAAGCGCCCCAACCTCACCGTGATTACCCG
CGCCCACACCACTCGTGTGTTGTTTGAAGGTAAACGCGCCTTAGGCGTTG
AGTACAAACGGGCGGGCAAGTTGCAGCAAGTTTTTGCCCAGCGCGAGGTG
ATACTCAGCGCAGGAGCGGTCAACAGCCCGCAGCTATTGATGCTGTCTGG
TGTGGGAGCCAGCGAGGCCTTGCAGTCGCAGGGTATAAAGGTGATGCACG
AAAGCCCCGCAGTGGGTCAGCACCTACAGGATCACCTAGGCATCGACTTA
ATTCTGAAGACCCGCGTAAAAACGCTCAACGACACTTTGCACCCTTGGTG
GGGCAAGCTGCTCGCTGGCGTGCGATACCTGACCACATTGAGCGGGCCGC
TCTCACTGAGCCTCAATCAAGGCGGTGGTTTCATGCGCACCCAACCCGAG
CTCAAGCAGCCAAATTTGCAGCTGTACTGCTCGCCGCTGAGTTACACCCG
CGCACCGGCGAAGACTCGGCCATTAATGAACCCCGACCCCTTCTCTGCCT
TTATGCTTGGCCTCAGCAATTGCCGACCCAAGTCGACTGGCAGCATCACG
CTGCGCAGCGCTGACCCTTTTGACAACCCCATCATCCACGCCAACTATTT
CTCTGCGCCTGAAGACATGCAAGAACTAAAGGCTGGTACACGCTTTTTGC
GGCAGATGGTACAGACCGAAGCGCTGCAGGATGTAGTCGTTGAGGAGCTG
GTACCGGGGGAGTCCGTCCAGAGCGACGAGCAGCTAGAAGACTTCATTCG
CCAGTCGGCTTGGACGGTGTTTCATCCGTGCTGCAGCTGCCGCATGGGGC
CTGATCCCGCCACCCATGTAGTCGATGCACGGCTACGAGTACATGGCTTG
CGAAATATCCGCGTGGCTGACGCATCGATATTCCCCCATATTATCTCGGG
TAATACCAATGCCCCCTGCATGATGGTGGGAGAGAAAGCATCAGATATGA
TTTTGCAGGATGCGGAGAACCCAGATAATTAA
back to top
Add to Basket