maker-scaffold334_size202906-snap-gene-1.35-mRNA-1, maker-scaffold334_size202906-snap-gene-1.35-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold334_size202906-snap-gene-1.35-mRNA-1
Unique Namemaker-scaffold334_size202906-snap-gene-1.35-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold334_size202906supercontigscaffold334_size202906:158492..162427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
fanconi anemia group j protein homologmaker-scaffold334_size202906-snap-gene-1.35Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:exon:1032maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:exon:1032Tigriopus kingsejongensisexon
maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:exon:1033maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:exon:1033Tigriopus kingsejongensisexon
maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:three_prime_utrmaker-scaffold334_size202906-snap-gene-1.35-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold334_size202906-snap-gene-1.35-mRNA-1:cdsmaker-scaffold334_size202906-snap-gene-1.35-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2004035auto2004035Tigriopus kingsejongensispolypeptide
Tk08972Tk08972Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08972

>Tk08972 ID=Tk08972|Name=Tk08972|organism=Tigriopus kingsejongensis|type=polypeptide|length=1025bp
MSALSPHSYTISGVPVHFPCKAYPSQVAMMNHIIRALQRGHNALLESPTG
SGKSLALLCASLAWQQVETRKAIEYNQAVDSGVLPAEFVHLDANGDVTQA
EYVEPEDPNLQAAIDVALAESLPSGGFVPTDDSDDFVTSAPPAKRARPPD
PASPPLQPAVMRKVKKKTVPKIYFGTRTHKQITQIIRELNKTPYRDCKMT
ILASRDHTCIHPQVSRMKSRNEGCKELNDTKKAGGGCVYRSAVKSKLNSH
HALTAYRGTRDAWDIEDIVKVGQKARACPYYAVRELKIQAQIVFCPYNYL
VEPAIRKSMDISLKGQIVILDEAHNIEDSARSAASWQVTQDDLREAMQDL
EKLIQNGIPELEAHREMAHLCSRLSVWIDSSSQNLTDYTDYASASKVWTG
TEIVALFNVHGIGQDKYGYLMEEFAKVAANFNEKIDNSEERADPEVPSLH
SNSMSVLEGFFMILNYLYMNNMRHLNDYRVALVRTQSRKAAKPELGTWMS
KRKGGKEEHKFTFTANFWCLNPAVTFEELKNTIHSIILTSGTLSPMASFS
SELDVRFPLKLEANHVIDKRQVWIRTLSHGPTGHSLNATFRNAESFGFQD
EMGRLTHKVCETIAHGILLFLPSYAMLNKLRDRWQQTGAWEQMGRKKVLI
TEPRFSDEFEASIKHFYDVIEATNSGPDPASGVDGALFMAVCRGKVSEGL
DFADNNARVVICVGIPFPNFKDIQVDLKKKYNDQRKVTHKDILSGNDWYE
IQAFRALNQALGRCIRHRRDWGGILMVDDRYQKIQRYIGSLSKWVRSGVE
HYKSFDGMLSSLEDFNKDMKVLDQEHKAQEPPPPPPPTDPDLGSWAALEK
VNRLKRECREEIARVVDKPSESAVHGPPPAAKLAQQMTQQAQQQLAPIFA
ISPKNLGRSDSKAIAHHRPMKQGSTNHIVQVIDITNDSSDAQANVFGVPE
RVGDELYPTDMTIIPESPEKGSEAVTLVSKMGQAKENTLPTTPRVAKKSP
AMSRKFSTQKNQSVLNYADSDDDFL
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mRNA from alignment at scaffold334_size202906:158492..162427-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold334_size202906-snap-gene-1.35-mRNA-1 ID=maker-scaffold334_size202906-snap-gene-1.35-mRNA-1|Name=maker-scaffold334_size202906-snap-gene-1.35-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3936bp|location=Sequence derived from alignment at scaffold334_size202906:158492..162427- (Tigriopus kingsejongensis)
CGAAAGACGGAAAAGCGAGCTGAGCGAACTGAGCGAGCTGAACGTCCCCA
CTGGGTTGAGATTGAACGGCCTTCAATCATGTCGGCCTTGTCGCCCCACT
CGTACACCATCAGCGGGGTGCCCGTCCACTTTCCGTGCAAGGCTTACCCC
TCCCAAGTGGCCATGATGAACCACATCATTCGGGTAGGCGGGCCCCACCG
GACGACCATGCAGGCGACCAGGGCGGATCCCAATGGGCGGCAGAGCCCAG
CCGACCGGACCATCCCTCTCAGACACGCCACGGGCGACTGAGGTGGGACC
ACCGGCCATCTCGGTCTGGCCACCATCGCGCTGGTGACCCCCAGTCAGTC
AGCTGGCTGACGGGCCCTCCAATTGGAACCCGCCCGGGGGGGGGGGACGT
TAGCCCTTCGGGAATGGCCCCAGTGGCGGTGAGAGAGGCCGACTGGATAG
ATGAATATGAGCCCCAGCTGATCGATATGGGACGAAACCGCCACATTGGC
CGTCAGCCGCAGTACTGTAGTCCAACCCCTGAACCATCCCCCAGAGCCGG
ATGCGAACCACCAATGGGTGGTTCGCATCTTCAATTTCTTTATCCGCCGG
GCCCGGGAATCGATCTGCGGCCTTTCAGCCCGGCAGACTTCTTCGCTGAC
CACTTCCCCATTCAATCCCCATCAGTACTGTAGTCCAACCCCTGAACCAT
CCCCCAGAGCCGGATGCGAACCACCAATGGGTGGTGGGGCCGGCGTGTTC
ACGCTGGGAGTCGATGGGGCGATCGCATGGGCCCAGGGCCCGAAATGTAT
ACCGAGTGGGTCTCGATTTTCACCCCGAATGTTGTTCAATGTTAGAGCGG
TCCGAGTTAGGGACTCGAGCCTGAAGCCCTTCCGGCGTGGATCCCACCCG
CTCTCGTTCGATGCCGGAGCCCATCCCGTCCGAGCGTCATGTTTCGTCTC
ATTTTCAGGCCCTCCAACGTGGCCACAACGCCCTGTTGGAGTCACCCACG
GGGAGTGGCAAAAGTCTGGCCTTGCTCTGCGCCTCGCTCGCCTGGCAACA
GGTCGAAACCCGGAAGGCCATCGAATACAATCAGGCCGTCGACTCGGGCG
TGCTGCCGGCCGAATTCGTCCATCTGGACGCTAATGGCGACGTCACCCAA
GCCGAGTATGTCGAACCCGAAGATCCGAACCTCCAGGCGGCCATTGATGT
GGCCTTGGCCGAATCCCTCCCAAGCGGAGGCTTCGTGCCCACCGACGACT
CGGACGACTTTGTGACGTCTGCACCGCCCGCCAAACGGGCTCGGCCCCCT
GACCCGGCCAGCCCGCCGCTCCAGCCCGCGGTGATGCGCAAAGTCAAGAA
AAAGACCGTGCCCAAGATCTACTTCGGCACTCGCACGCACAAGCAAATCA
CTCAGATCATCCGTGAGCTCAACAAGACACCCTACCGGGACTGCAAGATG
ACCATCTTGGCCTCCCGAGATCACACGTGCATCCACCCGCAGGTGTCGCG
CATGAAGAGCCGCAATGAAGGCTGCAAGGAGCTCAACGATACCAAGAAGG
CCGGCGGGGGCTGCGTGTATCGGAGCGCAGTCAAGTCTAAGCTCAACTCC
CACCATGCCCTCACCGCCTACCGAGGCACCCGCGATGCGTGGGACATTGA
GGATATCGTCAAAGTGGGACAAAAAGCTCGGGCCTGTCCTTACTATGCGG
TGCGTGAGCTCAAAATCCAGGCGCAAATCGTGTTCTGTCCTTACAACTAC
TTGGTCGAGCCCGCCATCCGCAAATCCATGGACATCAGTTTAAAGGGACA
GATCGTGATCCTGGACGAGGCCCACAATATCGAGGACTCGGCCCGCTCGG
CCGCTAGTTGGCAAGTCACCCAAGACGACCTCCGTGAGGCCATGCAAGAC
TTGGAGAAATTGATTCAGAACGGCATCCCGGAACTCGAGGCCCACCGGGA
AATGGCCCATCTCTGCTCGCGGCTCTCGGTCTGGATCGACTCGTCTAGTC
AAAACCTGACTGACTACACGGACTACGCCTCGGCCTCCAAAGTGTGGACC
GGCACGGAAATTGTGGCCCTCTTCAACGTGCATGGGATTGGGCAAGACAA
GTATGGCTATCTCATGGAAGAATTCGCCAAAGTGGCGGCCAACTTCAACG
AGAAAATTGACAATAGCGAGGAGCGTGCGGATCCAGAGGTGCCCAGTCTC
CACTCCAATAGCATGAGCGTGCTCGAGGGCTTCTTCATGATCCTCAACTA
CTTGTACATGAATAACATGCGCCATTTGAACGACTACCGCGTGGCCTTAG
TTCGCACTCAGTCTCGGAAGGCGGCCAAGCCCGAATTGGGCACGTGGATG
AGCAAGCGAAAGGGTGGCAAAGAGGAGCACAAGTTCACGTTCACCGCCAA
TTTCTGGTGTCTCAATCCGGCCGTCACATTCGAGGAGCTCAAGAACACCA
TTCACAGTATCATTCTGACTTCGGGCACACTCTCGCCCATGGCCTCCTTC
TCTTCCGAGCTGGACGTGAGGTTCCCCCTCAAGTTGGAGGCCAACCACGT
GATCGACAAGCGACAGGTCTGGATTCGAACCTTGAGCCACGGACCCACGG
GACACTCGCTCAATGCCACATTCAGGAACGCCGAGTCCTTCGGCTTTCAA
GACGAGATGGGCCGACTGACCCACAAGGTGTGCGAAACCATTGCTCACGG
GATCTTGCTCTTTCTCCCGTCTTACGCCATGTTGAACAAGCTCCGTGATC
GATGGCAGCAGACGGGGGCGTGGGAGCAAATGGGTCGCAAGAAGGTGCTC
ATCACCGAGCCGAGATTCTCGGACGAGTTCGAGGCCAGCATCAAACACTT
TTACGATGTCATCGAGGCCACCAACTCGGGCCCTGATCCCGCCTCTGGCG
TGGATGGCGCGCTCTTCATGGCCGTTTGCCGGGGCAAGGTCAGTGAGGGT
CTGGACTTTGCCGACAACAATGCCCGGGTGGTGATCTGCGTGGGCATTCC
CTTCCCCAACTTCAAGGATATTCAGGTGGACTTGAAGAAAAAGTACAACG
ACCAGCGGAAGGTCACCCACAAGGACATCCTCTCGGGCAATGATTGGTAC
GAGATCCAGGCATTCCGAGCCTTGAACCAGGCTTTGGGACGGTGCATTCG
ACATCGTCGCGATTGGGGCGGCATTCTCATGGTCGACGATCGCTATCAAA
AGATCCAAAGGTACATTGGCAGTCTGTCCAAGTGGGTGCGCTCGGGCGTG
GAACACTACAAGAGCTTTGATGGGATGCTCTCGTCTTTAGAGGATTTTAA
TAAGGACATGAAAGTATTGGACCAAGAGCACAAGGCTCAGGAGCCTCCCC
CGCCCCCTCCGCCCACCGATCCAGACTTGGGATCCTGGGCCGCATTGGAA
AAGGTCAATCGACTCAAGCGCGAATGTCGGGAAGAAATTGCCCGTGTGGT
CGACAAGCCCAGTGAATCGGCGGTTCATGGCCCACCTCCCGCCGCTAAGT
TGGCTCAACAGATGACACAGCAGGCTCAGCAGCAATTGGCTCCCATTTTC
GCCATCAGTCCGAAGAATCTGGGTCGAAGTGACTCGAAAGCCATCGCCCA
CCATCGGCCCATGAAGCAAGGGAGCACGAACCATATTGTTCAAGTCATCG
ACATCACCAACGATAGTTCCGATGCCCAAGCCAATGTGTTTGGAGTTCCA
GAGAGAGTGGGTGATGAGCTTTACCCGACTGACATGACAATCATTCCCGA
GAGTCCGGAAAAGGGCTCTGAGGCGGTCACGTTGGTGAGTAAGATGGGTC
AGGCTAAAGAAAACACCCTGCCCACCACGCCGAGAGTTGCAAAGAAGAGC
CCCGCAATGTCCAGAAAATTCTCGACTCAGAAAAACCAGAGTGTCCTTAA
TTATGCCGATTCAGACGATGATTTCTTATAGTTTCC
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