maker-scaffold33_size549341-snap-gene-4.33-mRNA-1, maker-scaffold33_size549341-snap-gene-4.33-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold33_size549341-snap-gene-4.33-mRNA-1
Unique Namemaker-scaffold33_size549341-snap-gene-4.33-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold33_size549341supercontigscaffold33_size549341:444198..446561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
transient receptor potential cation channel subfamily a member 1-like proteinmaker-scaffold33_size549341-snap-gene-4.33Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1311maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1311Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1312maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1312Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1313maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1313Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1314maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1314Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1315maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1315Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1316maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1316Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1317maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:exon:1317Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019479Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019480Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019481Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019482Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019483Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-4.33-mRNA-1:cds-2019484Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2019485auto2019485Tigriopus kingsejongensispolypeptide
Tk11551Tk11551Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11551

>Tk11551 ID=Tk11551|Name=Tk11551|organism=Tigriopus kingsejongensis|type=polypeptide|length=480bp
LRALRQAAMDEPSGPEVLVNEHHRVSESEEELQTLAAENVEEDSDDGDDV
FESKPLDQGITKTKINDLDEKGLSALHYAARYSYYTIIATLLDLGANINR
VGDDEMTPLHYAASQLQCQWVQGKHRYGKKTSNQALRAYNKRKASMISTS
GSSSPVMGHDSPDGPNLDSSQEVMSLLIRRGANVNATDKYKLTALHHGAI
RGNEVAIRCLLQADDIGKEPKDTQGSTPLHLAATYNNYSVAQLLIKEQAN
PRSLNCDKRTPLHEACLEGHFSIARLMLQEGEARFDEDYAKSMMTDKDDE
GSTPLLLGVGSGRLEIVRLLLQKRDDPNTRNRFLVYPLHSAARTGDLEIT
KILVQYNARLNARNALQQSPLFLAASTNHTDVIEFLIESGANLNSWDQDG
MTPLMVAGMEGHTEAVKALLNHGARLEVLDKEDRSVLYHAAERNRPEIIK
LLLKHHRGAELMFLKDQRDNLPIHVASFRG
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mRNA from alignment at scaffold33_size549341:444198..446561-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold33_size549341-snap-gene-4.33-mRNA-1 ID=maker-scaffold33_size549341-snap-gene-4.33-mRNA-1|Name=maker-scaffold33_size549341-snap-gene-4.33-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2364bp|location=Sequence derived from alignment at scaffold33_size549341:444198..446561- (Tigriopus kingsejongensis)
ATTGCAAAGCTAGGGACTGTACTATGTCACACAATCGGAATGTCTTGATT
CATTAGCGTCCTGCGAGCCTTGAGACAAGCCGCCATGGACGAGCCCTCAG
GACCTGAGGTCCTCGTCAATGAACACCATCGTGTGAGTGAGAGTGAAGAG
GAGCTCCAAACTTTGGCTGCAGAAAATGTCGAGGAGGATTCCGACGATGG
TGATGATGTCTTTGAATCCAAGCCCTTGGACCAGGGAATCACCAAGTAAA
CTGCACTGATTGCTTGCAAAATGTTGGGTCTTACTGATTCCTTATCCTTC
TCTTAGTTTGGCCTTGCCATCCAATGAGACTGGACTTCCGTTCGAGGTCA
GATCGGGAGGCTCAATCACGCCTGAACTCATTTCTAAGTCCCTCCACCAG
GTAAAATTTATTGTGGTTTGTTCAAAAGTTCAAGTCATTGCATCTAATTG
ACCTTTGTTCTAAGATTGCCCGAGACAATGATCTGGATGGGCTCAAATTT
CAAATGGGGGATGACGAGGGCGCCCTAAGGACAAAGATCAATGACCTCGA
CGAGAAAGGGTTGAGTGCCCTTCATTATGCGGCTCGCTATTCATACTACA
CAATCATCGCCACCCTCCTGGACCTGGGGGCCAATATCAACAGGGTGGGG
GACGATGAGATGACGCCTCTGCATTATGCGGCAAGGTAATCGGGCCTTAT
GGTTTCTATGTAGTCAATTGCAATGTCAATGGGTTCAAGGAAAACACAGG
TATGGAAAGAAAACCAGCAATCAAGCTTTAAGGGCCTACAACAAAAGGAA
AGCCTCCATGATCTCAACCAGCGGATCCAGCTCCCCGGTGATGGGTCACG
ACAGTCCGGATGGCCCGAACTTGGACTCGAGTCAAGAAGTGATGAGTTTA
CTCATTCGTCGAGGTGCCAACGTTAATGCTACAGACAAATACAAGTTGAC
AGCCTTGCATCACGGTGCTATCCGGGGTAATGAGGTGGCCATTCGATGCC
TGCTTCAAGCTGACGATATTGGGAAAGAGGTAATAATCCTGTCTTGATGC
GCTTTTATGCGATGGGCTGACCAGTAACAAAAAGATCCAAACCATATAAA
AATGCGGTATGATCGTGAAAGAATTGAACATTGAAGTGCAAAGATGTTTG
TACTCCCTCTTGCTTGAAACTCTCGCATGTCTGTGAGATCGAAGTCTTAG
TTTCTCCAACCGATATTAAATTATTGGGTACAGGCAAATTAATTTGGCAA
TGATAATATTGGCTTCTTCCACGGCAATGCAAAATGACTTTGGTCTAATG
AAATACTTACCATTGATCTGTCAGGTCCAAGAATGCATACACTGAAGGTA
TTTTGTAACTAACCTAATGAATTGGGTCCTTAGCCCAAGGACACCCAAGG
GAGCACTCCTCTCCATTTGGCGGCGACATACAACAATTACAGTGTGGCCC
AATTGCTGATCAAAGAGCAAGCAAATCCCCGGAGTTTGAATTGTGATAAA
CGGACACCTTTGCACGAGGCGTGTCTGGAGGGTCATTTCAGCATCGCCCG
ACTGATGCTTCAAGAAGGCGAGGCTAGATTTGACGAGGACTACGCCAAGA
GTGTAAGCGAAGGATCGGCCATCCATGATGATTGGATTCGCGTAAAAGAA
TGTTCTAATCGTTCCAGATGATGACGGATAAGGACGATGAAGGCTCTACG
CCTTTGCTATTGGGCGTGGGAAGTGGGCGGCTTGAGATTGTCCGCCTTCT
GCTTCAAAAAAGGGACGATCCTAACACGCGGAATAGGTTTCTGGTGTACC
CATTACATTCAGCAGCCCGCACTGGGGACCTGGAAATCACAAAAATACTC
GTCCAAGTAGGAAATTATGCCCCCCATTCCTATATGCTCACGGAATCACC
CACAACAGCCAATTGCTTTTAGTACAATGCTCGACTGAATGCACGAAATG
CACTTCAACAAAGTCCATTGTTCTTGGCAGCTTCCACCAACCACACTGAT
GTCATTGAGTTCCTCATTGAGAGGTACTACGGTACATATGTCATATCAAG
TCTTTCGGAATCACCAATAAATATGCCTTGCCCTTCCAAGTGGGGCCAAT
TTGAATTCGTGGGACCAGGATGGAATGACTCCTCTCATGGTGGCGGGCAT
GGAAGGGCATACGGAGGCAGTCAAGGCTCTCCTCAATCATGGAGCCCGAT
TGGAAGTTCTGGACAAGGAGGATCGGAGTGTCCTTTATCATGCCGCTGAG
CGGAATCGTCCGGAGATTATCAAGCTACTCCTGAAACATCACCGTGGGGC
AGAGTTGATGTTTCTCAAAGATCAGCGGGACAATCTACCCATTCACGTGG
CCAGTTTCCGAGGG
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