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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold340_size202118 | supercontig | scaffold340_size202118:101840..108925 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1545 | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1545 | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1546 | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1546 | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1547 | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1547 | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1548 | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:exon:1548 | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:three_prime_utr | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:three_prime_utr | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:three_prime_utr | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:three_prime_utr-1994314 | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:cds | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:cds | maker-scaffold340_size202118-snap-gene-1.28-mRNA-1:cds-1994316 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk00683 >Tk00683 ID=Tk00683|Name=Tk00683|organism=Tigriopus kingsejongensis|type=polypeptide|length=652bp
LPVWEYKEKFLELLGQHQSLCLVGETGSGKTTQIPQWCVDFAKKMGKKSC
ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPKTLLKYMTD
GMLLREAMSDPMLENYQVIMLDEAHERTLATDILMGVLKTVTTHRPDLKL
VIMSATLDAGKFQNYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRT
VIQIHMCEEESGDVLLFLTGQEEIEEACKRIKREIDNLGPETGELKCIPL
YSTLPPNLQQRIFEAAPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEK
AFKNEMQENTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR
ALELLNYLAALDDDGNLTELGAIMAEFPLDPQLAKMLIASCENNCSNEIL
SITAMLSVPQCFQNMEDPQWCYENFVNYRSLKSSDNVRQQLCRIMDRFNL
KRTSTDFTSKDYYINIRKALCAGFFMQVAHLERTGHYLTVKDNQIVQLHP
STCLDHKPEWVLYNEFVLTTKNYIRTVIDVKPEWLVKTAPQYYDMDNFPQ
CEAKRQLEQIITRVNSRQYKKGLCLTLGSGGCNITLRQHYYAKLLPIVPV
HV back to topmRNA from alignment at scaffold340_size202118:101840..108925- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold340_size202118-snap-gene-1.28-mRNA-1 ID=maker-scaffold340_size202118-snap-gene-1.28-mRNA-1|Name=maker-scaffold340_size202118-snap-gene-1.28-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7086bp|location=Sequence derived from alignment at scaffold340_size202118:101840..108925- (Tigriopus kingsejongensis)
GTACTATGAGATTTTTCGCAAACGCATCACCTTGCCCGTGTGGGAGTACA
AGGAGAAGTTTCTGGAGCTCTTGGGCCAGCACCAGAGTCTCTGCCTAGTG
GGTGAGACCGGATCGGGCAAGACCACGCAAATCCCGCAATGGTGTGTCGA
CTTTGCCAAGAAGATGGGCAAAAAGTCGTGCGCCTGCACGCAACCCCGCC
GTGTGGCCGCCATGTCCGTGGCCCAGCGCGTGGCCGAAGAGATGGATGTG
GCTTTGGGCCAAGAGGTGGGTTACTCGATCCGTTTCGAGGACTGCTCGGG
CCCCAAGACGCTGCTCAAGTACATGACCGACGGTATGTTGCTGCGTGAGG
CCATGTCCGACCCCATGCTCGAGAACTACCAGGTCATCATGCTGGACGAG
GCTCACGAGCGTACGCTGGCCACTGATATTCTCATGGGTGTCCTCAAGAC
GGTTACCACGCATCGGCCCGACCTCAAGCTGGTCATTATGAGTGCGACGC
TGGATGCGGGCAAGTTCCAGAACTACTTCGACAACGCGCCCCTCATGAAT
GTGCCCGGCCGCACGCACCCGGTCGAGATCTTCTACACGCCTGAGCCCGA
GCGTGACTACTTGGAGGCGGCCATTCGGACCGTGATTCAGATCCACATGT
GCGAAGAAGAATCAGGCGACGTCTTGCTCTTCCTGACCGGTCAGGAGGAG
ATTGAAGAGGCGTGCAAGCGCATCAAGCGCGAAATCGACAATCTCGGCCC
CGAGACGGGCGAACTCAAATGCATTCCACTCTACTCCACGCTGCCGCCCA
ATCTGCAGCAGCGCATCTTCGAGGCTGCGCCACCCCGTAAGCCCAATGGA
GCTATCGGGCGGAAGGTGGTGGTGTCCACCAACATCGCCGAGACCTCCCT
CACCATTGACGGGGTGGTATTTGTCATCGACCCGGGTTTCTCGAAGCAAA
AGGTGTACAATCCGCGGATTCGAGTGGAATCCCTGCTTGTCAGTCCCATT
AGCAAGGCCTCGGCGCAACAGAGAGCTGGACGGGCGGGTCGAACCAAGCC
GGGCAAGTGCTTCAGACTCTACACGGAGAAGGCGTTCAAGAACGAGATGC
AGGAGAACACCTACCCGGAGATTCTCCGATCCAACCTGGGCTCGGTCGTT
CTCCAGTTGAAGAAGTTGGGCATTGACGACTTGGTGCACTTTGATTTCAT
GGACCCGCCCGCACCCGAGACCTTGATGAGGGCCTTGGAGCTCCTCAACT
ACCTGGCTGCCCTGGATGACGACGGAAATCTCACGGAGTTGGGCGCCATC
ATGGCCGAGTTCCCACTGGATCCCCAATTGGCCAAGATGCTGATTGCCTC
GTGCGAGAACAATTGCTCCAACGAGATCCTCTCCATCACGGCCATGCTCT
CCGTGCCTCAATGCTTTGTGCGGCCCAACGAGGCCAAGAAAGCTGCCGAC
GACTCCAAGCTTCGCTTCGCTCACATTGATGGGGACCATTTGACCCTCCT
CAATGTGTACCATGCTTTCAAGCAGAACATGGAAGATCCTCAGTGGTGCT
ACGAGAACTTTGTCNTCAACTACCTGGCTGCCCTGGATGACGACGGAAAT
CTCACGGAGTTGGGCGCCATCATGGCCGAGTTCCCACTGGATCCCCAATT
GGCCAAGATGCTGATTGCCTCGTGCGAGAACAATTGCTCCAACGAGATCC
TCTCCATCACGGCCATGCTCTCCGTGCCTCAATGCTTTGTGCGGCCCAAC
GAGGCCAAGAAAGCTGCCGACGACTCCAAGCTTCGCTTCGCTCACATTGA
TGGGGACCATTTGACCCTCCTCAATGTGTACCATGCTTTCAAGCAGAACA
TGGAAGATCCTCAGTGGTGCTACGAGAACTTTGTCAACTACAGGTCCCTC
AAGTCGTCCGACAACGTTCGCCAACAACTTTGCCGGATCATGGACCGGTT
CAATCTGAAGCGAACCTCGACCGACTTCACCTCCAAGGACTACTACATCA
ACATTCGGAAGGCTCTGTGTGCGGGCTTCTTCATGCAAGTCGCCCATTTA
GAGCGTACCGGACACTACTTGACCGTCAAAGACAACCAAATTGTTCAACT
TCATCCCTCCACGTGTTTGGATCACAAGCCCGAGTGGGTCTTGTACAATG
AGTTCGTCCTCACCACCAAGAATTACATCCGGACCGTGATCGATGTGAAA
CCCGAGTGGCTGGTCAAGACCGCCCCTCAGTACTACGATATGGACAATTT
CCCTCAGTGCGAGGCCAAGAGGCAATTGGAGCAGATTATTACCAGGGTCA
ATTCGCGGCAGTATAAGAAAGGGTTTTGAATGGCTTGAGTGCGATCCTAT
CCTCTGAACGAGTATATTTGTCGACAAAGCAACTGTATTATTTTCAAAGA
AAGGGATCGACTGTATGTGTTTCTTGTACAAAAAACGAGTGATGAATAAT
AAACGGCCTCTACATGTTCTAAAGAGACACCAAAGGATGATCCATTGTGG
GAACACATCGTAATATGATCATCTTGCCATGTTTCCAGATGAACACGACA
CATCCATGACCTCTCTGCGTCCAGATGGGACAACAGCAATCAGCATTCGC
TGTGCGTATCAATTTTCTTCCCATCTTTCTCCCAAGGTGAGATGAGCTTA
GAAGTCCCAGATTCATGCCATTTGTTTATCTTTGAAAGCGTCCATGGGAA
ATGTTCACGTCAAAGCTTGAAAGACCCAAGGGAAGAATATCCTTCATTTA
CCCAAAGCTCTAAAAATAGTGGACTTGTCGAGAAGAACGAGCCGATCCTA
AAGTAGACTGCAGTGCAAAAAACTATTTCATTCGCGAGGAAGAAACAAAA
TGAGAGAGGTGTGGGCCATGATCATTAGACTCACACACATCTATTTCTGT
CAGGTTGTGCCTGTGTCACTCGGTAGTGGTTGGTGTAACATCAATTAGGG
ATTAGTCGAATGACAAAGAATTGCAGCTGCCAGGGAACACTTTTGAATCA
TGTCAATGAATCGAGTCGTTCTTTTTGTGATTTGTTGTAGTTCCTTTGAG
TATACAGTAGAGCAATGTGTGCTTTGACCTAACTCTGTTTCTACAAGCGG
TGCAATACTTAAAAACAAACAAAGTTTGGCTGAGCTAACGCCGATTCGAG
AGGTTTGAAGTCCATGATTGCCAGTCTTGGCTGCCCAAGCTGCTAGAATA
TCCTATTTAAATTAGGACCAAACCCTATTATGCTCATAATTATGAGTTGT
CGCCATAGCCAAGGCCAGTGGAGTGGCCTTCCCCGTCACTACTAAGCGCC
GGAAATGATCGCATTCGTCACCTCTGCGATTATCGCATGAATTCGCCTTC
CCCTTTCATGAATGCGCCCCACAATGCTTTGGCCGAGTTGTTACGTGATC
CAAGCGTCGGAGGACTCTTTTGGCCTCGCCGAGGAGGAATCCTCAAATAT
TTATCGTGCACTCCCGAGGAGTGTCCGACGGATTATTTTGGCGCAGTTAT
TGCGATGAAGCGAGTGAGACAGCCTTTTTCTTTGGTCTCGTTTTGATTGC
CCCGACTGGGAGTCTGCCATCGGATATTGAGAGTCTCCGCCTAATCACAT
GGGTGTTGTAGTAGAAAGCTGATCTAGTGTCCCTTGTGTCCTCACACATG
CACGTTCAGAGTGTATAGAGCACAAGTGGTGTGACGATTGGTATCGAATT
CGTTGGGAAAAGGCCCAACGAGTCGAATGCGGGTCAGGCTGAGTGGCCTT
CGCTCAGGGGGAACACCTGTCTACGTAAACAGAGTGAGTCTCCGATCGGA
GGGGCCAAAAAATCGATAGTGTGGACCATGAATATTTGAATCACCACCAT
CTATCTCTTCCAGTTTGTGTTTGACACTCGGAAGTGGTGGGTGTAATATC
ACTCTGCGCCAACACTACTACGCCAAGCTGCTCCCCATTGTCCCCGTTCA
CGTCTGAGAATGTGGCCTCATGCCAGTGTCCATCGGTTCCCCGGAAACGT
CCAAGAAGAACCTCAGGTCGAGCCTCTCGGTGGTGCTGGACACCATGGTC
AAGCATCGAGCCTTCTTCCTCTTCGCCTTGGGGACGATGAGTGCCACCTT
GGTGCTCATCTCCATGAACCACACCCATCACGCCGGGATCCACACCTTGG
TGAGCGAGACTCAGCACCGCTTGGTGAACCTAAGGAAGCGCTTTGAGGAC
GAGAGCGTCCTCCATGTCGAGGATGCCTACCTTGAGCCTTTGGGACTGTC
GACCCACGACGTGCGGGTCTTTTGGCCCAACTCGACGTGGCATACCAAGT
TCAAGAACGTCACGGAGCCCGTGATCTTGAGCGCCGTGCCCGACGGCCGC
ATGGGCGAGGCCATTAATTTCGTGAGGAACTCACGCCTCTTCTTACCTAA
TCTCACCGTGATACTCTACGACTTGGGACTGACCAGAAACGAACGCGAGC
TCCTCACCAAGTACTGTAACTCCACTCAATGTGCCATCAAGGAACTCGAT
CTCGCCCAATTTCCCCGCCATGTCGCCAACTTGGCCATCCGTGCTTACCG
GTAAGGTTAATGTGTCCAAACTGCATAGAGTGACAACGTCAAATAGTCAG
TTTTGAGGACCAAAATAGGATACGGCTTCCAATTATTGATAATTTAAATG
CCGTTATAACGTAAAATGTTCTTATGAGGGCGATCCTTGTATGTTTTGCG
AAAATAATAACTCATAACTCACTAAAGTATCGATATAGCTGATTTGCAGA
TTTGCAGATTTGCTTTGTCAAATTTCCGTCGATATCTTCTTCGTCCCGGA
ATTGTTCTCAGCTTTTGGTCTCATACCATTAAAACACTGATGGAAGTGTA
GTCTAGCCCCATTATGTTCTCGTAGAGCATTCTTCTAGAAATTTCATATG
GGTTCCAAGCACCTTGCTTCTAACAACTAAGCGCTTGGAAAATCTTGCCT
AAACGGGAAGCTTTCTATCCACTCTGGTTTAGGCGTCATTTGGACTGGTG
TGGCAATGTAATGAATAGACTGTGGCATCATTATTATCGCCTTAAGCGTT
AGAGAATGCCACGACGTCAGGAAATGGCAAAGCTATGAAATCAATGCTTG
CTCGATGACATTTAAGGGCAAAGTTTCACTTTAATGCGGGCGTTTGGATT
CAAACGAGTTTTCAACATTTTTATCCAAAACCTACGACCCAAGGTTTTTA
TTGATGGCATAAGGTTGCATCAAACCTAAAGAAAACATGACAAAGCGCCA
GGTTGAACCGAGTCGACATTCATGGTTGTAGAGAGGAAAATGTAAAACGT
CCGAACTCGGAACGATAATGTGACCGAGTCCGTGGAGGGATCAGCTGATC
AGCAGCACTCATGATGAAAACAAAGTATCGTTGGGTTGCTCTAGTGACTA
ATCGGAGAGTGCAATTATTTTCAAAATTATCAGTAACTCGATAACTTGAT
ATTCACAACTCCAATCCCCCATCTACCGAGAGAGTAATACTCAAGCCCAA
TTACGTACATTGTGCATAATTCATGTGGTACAATGGTCTTAGCATTTACC
TTTCCTTGATCATAACGTAGATTGCTTTTCGAGACTTCAGCCATAACAAT
AAAGCCGCTTTAACGGGACCAAGACCTTTCAAGGGATTTTTTTTGTCAAG
GAGTTCTTTCCTAAAAACATGGTGTGAGTTTGTGTTGAAATAGATCCAAA
TATGCTGAACACAAAAACTCAAAGCAAGGACAAATAAGTGATCAAACAGG
ACAATCAAAAGCTGATTTTGCCCACCTCAACTAGTGATGACCGATTGTGC
CGATTCACACCCTCTTTTTCGACTAGTTTTGAGTACTTTGGCATTCAAAG
TCGGTGGCATGCCATCCCTTTGAATCAAACCTTCGCACGAGTGCCTCAAC
TTGCTAGCCAAGTGGCTCAATTCCTCTCCCAAGCTCGTTCGTAGTTCTGC
ATGCAAAGGGAGCCAATAATTGAAACGTCTCATTTCTCATGCAAATGAGT
TTGATTGGATTACTTTCGTGGAACTGGAGTACATTGTGGCTTTTGCGTTT
CAGACCCTTGATCATCCAGAAAACCCTGAAGGACGCCGGCTGTGTGCTCT
GGCTGGACATTGACGAGAGGCTCACGACCAGTGATATCCAGGCCTACTTG
CAGAGGGCCAAAGACACCTCCGGAGTCCTCACCTGGCTTGACCCCGAGCG
GAAGATTCCTACCTCCAGTATGACCCACCCAAAGATGTTCGCCCGCCTCG
GGATCAGCGACCTCGAGGACTTCAACTTCCAACACATGGTCGAGCTCGGT
GCTCTCTTGATCTACTACACCCCCAACGTCCAGGCGAAACTGATGGAGCC
CTGGGTGAGGTGTGCCCTCATTGACGACTGCATTCAGCCCATCGGAGCCC
AATCCACTGGATGTCGATTCGACAAAAAGCCCCAATATCGCTACTCCGGC
TGTCACGCCTACGACACGTCGGCTCTGAACATTATCTTGGGGCAAATGTT
CCAGTTCAAGGAGAGCGCCTATGTCGATCCGGAGCCGTTCTTCGTCAAGA
TGGCCGAGGAGAGCGAGGCCGAAGACCCCGAGGGGAATGGCACGACCTTG
CCCGGGGATGTTCGCTACCCAGAGGGCTTCTCCTCACCGACCAATGTCAA
CCCATCCAGTTCTAGTCAGTCCTCTCGCATGAAACGGTATCACCACCACG
GTGACTGAGACGTGCTCTTCATCCAGATCCGAATCTAACCCGGAGACAGA
TCTGACACCAAAGAATATTTTCAGCCAGCTCATTTTTTCACCGATTGTAT
TGTGAATCCGTGTCAGAAACCATTCAACTGGGGCCATTTTGGGTTGAATG
CATGTGATCTTGTTGTACCATCTACCACTAAGGGGAGCGGGGTCTTATAC
CGCCCTCGAAACGTCGTATGCTTTTTACGGTGCAATGATGTGTTCTTTTC
GTAATTGGCGAGGACGAGTGGTGCCATAGAGTATTCTAATGTTGCATGTG
CCTCATAGTATTGCTTAGATAAACTTGACAACGTGCATGAACGTGTTTTT
TTAATCTCAAATACACAAGAAAAATCTTTTTGATCA back to top
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