maker-scaffold343_size201629-snap-gene-1.14-mRNA-1, maker-scaffold343_size201629-snap-gene-1.14-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold343_size201629-snap-gene-1.14-mRNA-1
Unique Namemaker-scaffold343_size201629-snap-gene-1.14-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold343_size201629supercontigscaffold343_size201629:99500..103979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
polyadenylate-binding protein 1maker-scaffold343_size201629-snap-gene-1.14Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:948maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:948Tigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:949maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:949Tigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:950maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:950Tigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:951maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:exon:951Tigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:five_prime_utrmaker-scaffold343_size201629-snap-gene-1.14-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cdsmaker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cdsmaker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cds-1993607Tigriopus kingsejongensisexon
maker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cdsmaker-scaffold343_size201629-snap-gene-1.14-mRNA-1:cds-1993608Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1993609auto1993609Tigriopus kingsejongensispolypeptide
Tk08443Tk08443Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08443

>Tk08443 ID=Tk08443|Name=Tk08443|organism=Tigriopus kingsejongensis|type=polypeptide|length=610bp
MASLYVGDLDPSVTEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERALDTMNFDVLKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKT
IDNKAMYDTFSAFGNILSCKVAQDPTGDSKGYGFVHFETEEAAVSAISKV
NGMLLNGKKVFVGRFVSRKEREIELGEKAKKFTNCYVKNINEEMSEEELT
DMFEQYGKISSIKIMKGDEGGNKGFGFVSFEDPECAEVACDNLNGKEIQG
KTIFVGRAQKKAERQMELKKKFEMIKMERMSRYQGVNLYVKNLDDTIDDE
KLRTEFTPFGTITSAKVMTEEGRSKGFGFVCFSSPEEATKAVTEMNGRII
VAKPLYVALAQRKEDRKAHLATQYMQRVTGMRMPQMGQMGFPQASGGYFM
PTMPQPQRFFNPAQTNMRPGGPRWAQNPRGGNPGMMGMGGGFRGHNPRAP
RANQGGMGGVRQMGQPMVPMMQARPGLSPQAVQQMQSNQRAQSFKYTQGV
RNPSQGQVMAQAMPPQQQPQQAVLIQGQDPLTASMLAAALPQEQKQMLGE
RLFPLIQRMYPDMPGKITGMLLEIDNSELLHMLEHQESLKSKVDEAVSVL
QAHQSKPETQ
back to top

mRNA from alignment at scaffold343_size201629:99500..103979+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold343_size201629-snap-gene-1.14-mRNA-1 ID=maker-scaffold343_size201629-snap-gene-1.14-mRNA-1|Name=maker-scaffold343_size201629-snap-gene-1.14-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4480bp|location=Sequence derived from alignment at scaffold343_size201629:99500..103979+ (Tigriopus kingsejongensis)
GGCCGCGCCCGCCCCGGGCGCGGGCGGCGTGAACCAGCAGGCCAACCCCA
ACTACCCGATGGCCTCGCTCTACGTGGGCGACCTCGACCCGTCGGTGACC
GAGGCCATGCTCTTCGAAAAGTTCTCGTCGGCCGGTCCCGTGCTCTCGAT
TCGCGTGTGCCGAGACATGATCACCCGAAGGTCCTTGGGCTACGCTTACG
TCAACTTCCAGCAACCTGCCGATGGTGAGAGAAGCACAGGCGGAGTAGCG
AGTCGTCATCAGTCAGGGTGGAAATCGCGAGGCTCCGAATCAGTTCGAGC
TAGTTCAACTGGCTGGCGATGCGATGATGTTGTTGGCCTGCTGCGATGCC
TTCGGCCCCAAGGGCTAAATTTGAAACTTCCGAACCCAACGGACTAACGA
GCCTTCGGGTGATTGCAGTCCGTGGGCTCCGTTTTTGTTCCGGGGAACTC
GGCAGGGGCGCTGGCCTGTGCGGGGGAAGCCAGGGGGAAGCCAGGGGGCA
GGGGAACTAGGTGTACGTCGCTGGGACCTAGGATGAGTCTAATTCATGCC
TTGCTTTTCCAGCTGAGCGAGCCCTGGACACGATGAACTTTGACGTGCTC
AAAGGCCGTCCCATCCGCATCATGTGGAGTCAGCGCGACCCCTCGCTCCG
ACGCTCCGGCGTGGGCAACGTGTTCATCAAGAATCTGGACAAGACCATTG
ACAACAAGGCCATGTACGACACCTTCTCGGCCTTCGGGAACATCTTGAGC
TGCAAGGTCGCTCAAGACCCCACGGGCGATTCCAAAGGCTACGGCTTTGT
CCACTTCGAGACCGAGGAGGCCGCCGTCAGCGCCATCAGCAAGGTCAACG
GCATGCTGCTCAACGGCAAGAAGGTCTTCGTGGGCCGCTTCGTGTCGCGC
AAAGAGCGTGAGATCGAACTGGGAGAAAAGGCTAAAAAATTCACCAACTG
CTACGTGAAGAACATCAACGAGGAAATGTCCGAAGAGGAGCTGACCGATA
TGTTCGAGCAATACGGAAAAATTAGCTCCATCAAGGTAAATAATGCTACC
AACGGCTACCAACGGCTACCAACCCTGGGCCTCGGTCCACTCACTCGCCC
GAGCTGGCTTCACCTGGCGGTGTCCTTGAGCCACCACCAACCACGCCAGG
CCACGCGTGATGCGGTGGCTGATGACGTCTGAGACAAGGCGACATCCGGG
TCTGACCTTGAGCCATCGGACCACTCTCGGCCCTAGTTAGGCCCCGGGTT
AGCCGGTCGAGCCGGAATTGAACGTTCCATGTCTTCGAACGTGATCAAAA
AACCACGCCAATAGGCTCGAGTGACATTGTTCGGCGCAGATCAACTTGGT
TACCCCGAAATGGATGCCCAGCTGGATGACTAACTCGACCCCCAGTAGCC
TGGGTGTGGGGCTAGATTATCGAGGATGGGGCTAGCCACCGAGCCTGCAC
TGAAGTTCGGACTCTGGCGATTAGGGAAACCTGAATGCCTGTTGGCGTTT
GAGGCATATCGTTATCGGTATGGCTCCCGAGACTAGCCCGCTAACTGTCG
ACAACGCCATGACCGATAAATGCTAAGGGCTCGTCAAATGTCATCGCGTG
ACATGCCTCGGAGAAAGCCTATGCCCAGTCGGGATTGGTCTCCAGTCAGA
TGGTTGATGTTTGCGGTTCCTGGACCCTCGGGCATTGTTGTCCGGAATCA
CAATCTCTCGGTCGAGCGATGGATGAAGCCAGACGCCAGCCTTGCCAATG
GGGGGATTTTTCCCTGGCTCTCAACGTATTTCCACCGGTTCAGTCCATTT
TAGGGGAGCTCCAACAGTTGCATTGCTTACGTTACCTGGCTGGGAGTCGC
GCAGTCTGAGAATCCTGGCACCAGAGCAAAGCTGACTGGCAACTAGCCCA
GGAGAGATTTCAATGCTAAATGGTCCACAATGTAATTAATACCTCTTGTT
GCAGATTATGAAGGGTGACGAGGGTGGAAACAAAGGCTTCGGCTTCGTCA
GCTTCGAGGATCCCGAGTGCGCCGAGGTCGCTTGTGACAACCTCAACGGA
AAAGAGATCCAAGGCAAGACCATCTTCGTTGGACGCGCCCAAAAGAAGGC
CGAACGTCAGATGGAACTCAAGAAAAAGTTCGAGATGATCAAGATGGAGC
GTATGAGCCGCTATCAGGGCGTGAACCTGTACGTCAAGAATCTGGACGAC
ACCATTGACGACGAGAAGCTTCGCACCGAGTTCACTCCCTTTGGTACCAT
CACGTCGGCTAAGGTCATGACCGAGGAGGGTCGTAGCAAGGGCTTTGGAT
TCGTGTGCTTCTCCTCGCCCGAGGAGGCCACCAAGGCCGTCACGGAAATG
AACGGACGCATCATTGTGGCCAAGCCGCTGTACGTGGCTCTGGCTCAACG
CAAGGAAGACCGCAAAGCCCACCTGGCCACCCAATACATGCAACGGGTGA
CTGGCATGCGCATGCCGCAAATGGGACAGGTAAGAGACACGCTTCTTGGC
TTTTGCCTCGCCCGCCCCTTCAGATCACAATGATGACATTAATCCGTGTT
TCACCTGACCAATTTGGATTGATTACAACCTTCGATTGCTGACCCGCGCC
CCTTGCCACCCATTAGCCCTTCGCGCTCACATCGATTTCGAATACTAACG
CGTTTTTGTCTTGGATTTCAGATGGGATTCCCCCAAGCCTCTGGAGGCTA
TTTCATGCCCACCATGCCTCAGCCTCAGAGATTCTTCAACCCCGCCCAAA
CCAACATGCGCCCCGGTGGACCCCGATGGGCCCAGAACCCCCGTGGTGGC
AACCCCGGCATGATGGGCATGGGCGGCGGATTCAGAGGACACAACCCCAG
AGCGCCTCGCGCCAACCAAGGTGGAATGGGCGGCGTTCGCCAAATGGGCC
AACCTATGGTGCCCATGATGCAGGCCCGCCCAGGCCTTTCGCCCCAGGCC
GTCCAACAGATGCAGAGCAACCAGAGAGCCCAGAGCTTCAAGTACACACA
AGGAGTGCGCAACCCTTCCCAAGGACAGGTCATGGCCCAGGCCATGCCCC
CTCAACAACAGCCCCAACAGGCGGTGCTCATCCAGGGCCAGGACCCCTTG
ACGGCCTCTATGTTGGCCGCTGCCCTCCCCCAGGAGCAGAAGCAAATGCT
CGGCGAGCGTCTCTTCCCCCTCATTCAGAGGATGTACCCAGACATGCCCG
GAAAGATCACCGGCATGCTGCTTGAGATTGACAACTCCGAACTGCTCCAC
ATGTTGGAGCACCAGGAATCGCTCAAGAGCAAGGTTGACGAGGCCGTGTC
TGTCCTCCAAGCTCACCAGTCCAAGCCCGAGACCCAGTAAGCTGGAAAGA
GTCCCACATCAACGTCGTCCTTGTAAATAGCGCACTCCAGTTCGATGGCG
TTGGAAGATGAAGCCTTTTGTTTTGGCCCCATTCACCTCTTACTCTCCTG
TACCCTTCTTCCGCCGATTCTTCGCATCTCTTTGGCCGATTGATTTTAAC
CCCCACCAGCCACCAGACACAAGCCACTCCAAGCAGTCCTCTGTGGACTC
TCAGAGTTGCCAGTGACCAATCTTAAGACTTCTCCCCGGCCGTGTCAAGG
CAAATAGGACGGGCTTCAAGTGATCCCGCCAACTCCAACCTCGAATCCAA
GCATCCCCCGCGGAAGTAGTGACCGAAAGGACAAAATCACGACTGCTTGA
CGACTGTGGCATCTTCAAGAGCTCTGGCACCTTCTGGCAAGCCCCATCAA
CAATATGGTTCGGAATGATTTCAATGAAATCAAACGTGCCCATCCTTTCG
GAAGTGGAGGGAGGTGGAGTAATTCAATGCTGTCTGAATACTGAAAAACG
CGAAGGCCTTATACCCAACCGAAATTGCCACCTTAATTGGCCAAAGAGAG
CGAAACCAACGACGTCAATGACAAAGCTCCCCAAAGTCTGTGGATTACAG
GAAACAAAACTACAGCCATTTTTTCGAGAAGACGACCGGCGAGACTTTGA
TACAAACCATACAGAAAATTATAATCATCCAGCCAAAAAATTGAAAAACA
CGTGGAAATCGCCTAAATGGTAGAAAAGAAATACAGAAACTCCCCTGCCT
TGAAATCATCGGACGGCGATAGAAGTACGCTTCGGGTCTGCTTCGACCAA
GGTCCATCAGGGCAGAGGTCCCAATACTTCGAGAACACCAACGCAAGAAG
AAGAAAAAAAAAGACAAAGACCAAAAAAATCGCAAAACACAAACAAGAAG
AAAAAAAAGAAACTCCATCCATTTTCGTTTTGTAGCTTAAGTTCATTCTA
CTTCTACAATACCCTCCCCCCACTACATTTAAGAAAGGCATCAGCATCAC
CTGCTTTTGTTGCCTCCAAGAACCCCCCTACAACAACACCCTTAAGCAAG
CATTTCCCACTCCCCCCTCTTATAAAGCAAAATATGTTTTCTGGGTGTCG
AAATTTCAATAAACATACTTTAAAAAAATA
back to top
Add to Basket