maker-scaffold367_size194084-snap-gene-0.38-mRNA-1, maker-scaffold367_size194084-snap-gene-0.38-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold367_size194084-snap-gene-0.38-mRNA-1
Unique Namemaker-scaffold367_size194084-snap-gene-0.38-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold367_size194084supercontigscaffold367_size194084:57521..59410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
scavenger receptor class b member 1-likemaker-scaffold367_size194084-snap-gene-0.38Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:exon:918maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:exon:918Tigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:exon:919maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:exon:919Tigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:cdsmaker-scaffold367_size194084-snap-gene-0.38-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.38-mRNA-1:cdsmaker-scaffold367_size194084-snap-gene-0.38-mRNA-1:cds-1981798Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1981799auto1981799Tigriopus kingsejongensispolypeptide
Tk00496Tk00496Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00496

>Tk00496 ID=Tk00496|Name=Tk00496|organism=Tigriopus kingsejongensis|type=polypeptide|length=583bp
TGSRCASRARGNRTSSAKRDFNALVSLEHHGLRTGSGVRMRRSRLMPLGT
CGKITGVCGLLSVVCALICVVLYEDVHSWVRYQLTQETIFRNDSLFFEAW
KDPPITPKTKVFVFNVTNHEQVLAGTASQFEVRELGPFVYTARTIKRVIA
WGHGGATLTFQSKTTYHYVADESAYPDDTSTFVIVPNILMMTGMLKTEVR
PQPAFVKQNIVWPILTSAGFGTPFLNLSVASFVWGYEDELGCLDSDPVGQ
HEESPFAFDDDFLDPGPRVTPPKRNYRQPDGRCVFGTLVGRNDSWEAPIT
IETGLTGLGSKGRVVEADGRSSFRAWRPDSSCDRITGNFEPSALPPQAGD
SFNLLLGIMCRSIRMEHVANVSYGQIQSHRYVPYNHSFNFTSDSCFQPLG
DELRLAPGAMRVATCTEGAPLLVSFPHFHGGSDWYLNQVHGLTPAQAHLH
LPYIDLEPTLGAPLGIQIRFQVSLLLESDPNFPPLAKLVRNQLLLPVFWV
QEGYHSPLQKELNLVAFGLHLPNYVALGLPVVFAVTALVMCGLAVLCSTT
GKTAINSSRGREYDLVLATIKCSPSECKPLTML
back to top

mRNA from alignment at scaffold367_size194084:57521..59410+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold367_size194084-snap-gene-0.38-mRNA-1 ID=maker-scaffold367_size194084-snap-gene-0.38-mRNA-1|Name=maker-scaffold367_size194084-snap-gene-0.38-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1890bp|location=Sequence derived from alignment at scaffold367_size194084:57521..59410+ (Tigriopus kingsejongensis)
ACGGGATCGAGATGCGCGAGTCGTGCCCGCGGAAATCGCACGTCTTCTGC
CAAAAGAGATTTCAACGCCTTAGTCAGTCTTGAACACCATGGCTTGAGGA
CGGGGAGTGGAGTCAGAATGCGGCGGAGCAGACTCATGCCGCTTGGCACG
TGCGGGAAGATCACGGGCGTGTGCGGGCTCCTAAGTGTGGTGTGTGCTTT
AATCTGCGTGGTGCTCTATGAGGACGTGCACTCCTGGGTGAGGTACCAGT
TGACACAGGAAACCATTTTTCGCAATGACTCATTGTTCTTCGAAGCGTGG
AAAGACCCGCCCATCACGCCCAAAACAAAGGTGTTCGTATTTAACGTGAC
TAATCATGAGCAGGTTTTGGCCGGGACGGCCAGCCAATTCGAGGTCCGGG
AACTGGGGCCCTTCGTGTATACTGCCCGAACCATTAAGCGGGTCATCGCC
TGGGGCCATGGGGGTGCTACGTTGACCTTTCAGTCCAAGACCACCTACCA
CTACGTGGCCGATGAGTCGGCGTATCCGGATGACACTTCCACCTTTGTGA
TAGTTCCCAATATTTTGATGATGACAGGCATGCTGAAGACCGAAGTTAGA
CCGCAACCTGCCTTTGTGAAGCAAAACATAGTGTGGCCCATCCTGACTTC
GGCCGGCTTTGGCACACCCTTTTTGAATTTGTCGGTGGCCTCATTTGTGT
GGGGCTACGAAGATGAGTTGGGCTGTCTGGACTCGGACCCCGTGGGTCAA
CACGAAGAATCCCCTTTTGCCTTTGATGACGACTTCCTCGATCCTGGACC
TCGAGTCACTCCACCCAAGAGAAACTATCGTCAACCCGATGGCAGGTGTG
TTTTCGGCACCTTGGTGGGTCGCAATGACTCTTGGGAGGCGCCCATCACG
ATCGAGACCGGATTGACTGGCCTTGGATCGAAAGGCAGAGTGGTGGAGGC
CGATGGCCGGTCCAGTTTTAGAGCCTGGCGGCCGGACTCGTCCTGTGATA
GGATAACTGGCAATTTTGAGCCGTCCGCACTTCCCCCTCAAGCCGGGGAC
TCGTTCAATCTTCTCTTGGGTATCATGTGTCGATCCATTCGGATGGAACA
CGTGGCCAATGTCTCTTATGGCCAGATTCAGTCCCACCGTTACGTGCCAT
ACAATCACAGTTTTAATTTTACCTCAGACTCCTGCTTCCAACCCCTCGGG
GATGAGCTACGACTGGCTCCTGGGGCAATGCGAGTCGCCACGTGCACTGA
AGGAGCTCCATTACTCGTGTCCTTTCCCCATTTCCACGGTGGCTCAGATT
GGTGAGGACAGTTGAGCGGATCTGACTGAAGCACTCGCTCACGTTAAACT
TATCCATTTCAGGTACTTGAATCAGGTCCATGGGCTCACGCCAGCCCAAG
CTCACCTCCATCTTCCCTACATTGATCTGGAGCCCACTCTTGGGGCTCCC
TTGGGGATTCAGATCCGCTTCCAAGTTAGTCTTCTCCTGGAGTCAGATCC
CAATTTCCCTCCTCTGGCTAAATTGGTGCGCAATCAGCTGTTGTTGCCGG
TCTTCTGGGTTCAAGAGGGCTACCATTCTCCGCTCCAAAAGGAGCTCAAC
CTCGTGGCGTTTGGCCTCCATTTGCCCAACTACGTGGCCTTGGGACTGCC
TGTGGTCTTCGCTGTGACGGCCCTGGTTATGTGTGGATTGGCCGTGCTGT
GCTCCACCACTGGAAAAACTGCCATCAACTCATCCCGTGGCCGCGAGTAT
GACTTGGTCCTGGCCACAATCAAGTGCTCACCGTCCGAATGCAAGCCCCT
GACCATGCTTTAGACTATGTGCGTTACTTTAATTGACTTTGTGAACAATG
GGCACCTACAAAATGGCTCGAATTATATAGGTTTTGTTGA
back to top
Add to Basket