maker-scaffold367_size194084-snap-gene-0.41-mRNA-1, maker-scaffold367_size194084-snap-gene-0.41-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold367_size194084-snap-gene-0.41-mRNA-1
Unique Namemaker-scaffold367_size194084-snap-gene-0.41-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold367_size194084supercontigscaffold367_size194084:7367..10753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
low quality protein: splicing factor 3b subunit 2-likemaker-scaffold367_size194084-snap-gene-0.41Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:exon:974maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:exon:974Tigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:exon:975maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:exon:975Tigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:cdsmaker-scaffold367_size194084-snap-gene-0.41-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold367_size194084-snap-gene-0.41-mRNA-1:cdsmaker-scaffold367_size194084-snap-gene-0.41-mRNA-1:cds-1959259Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1959260auto1959260Tigriopus kingsejongensispolypeptide
Tk00511Tk00511Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00511

>Tk00511 ID=Tk00511|Name=Tk00511|organism=Tigriopus kingsejongensis|type=polypeptide|length=1050bp
LSFIMSGLPTITQLRALRVVDLKERLVELDLSTQGLKADLINRLHEYFNI
QREGAREARLEAEAAAAAAAPPPVGEPVVVPEATDPEVVPEPEVVPEPEA
TEAAPEIPAAVPEAPEAVPEAAEIVPVVEASLVDQPAPASEVTAHMAAAT
HTVATTPSPQVEAQPHESTALAQTYPEPPTPATPATPEAPVVVELPVVEP
PPTTAPAIPTAQPEESATTVVPPQDTQVTEPEPEVRALASPPTTAELPPT
SPAVEPEAAPMEIPSPETPSGADVTRSPAAAITSAPPLSSGQLRAESPVP
EPMDEDLPPGTTPEPKPSLARIVIPSTAVIKESPALIRQPPVASAYGASD
DLEDEATPAGPQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTNVAIPKA
LEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTVTDP
NPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKEED
EKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVP
PQEDIKREELNKVPKLLEEDDLIEPRDADDDDQPKISKRKMKKLNRLSVA
ELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQG
KRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGK
IDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDEL
RTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSF
GYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELES
ESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGL
GMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHT
YDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAA
LRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF
back to top

mRNA from alignment at scaffold367_size194084:7367..10753-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold367_size194084-snap-gene-0.41-mRNA-1 ID=maker-scaffold367_size194084-snap-gene-0.41-mRNA-1|Name=maker-scaffold367_size194084-snap-gene-0.41-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3387bp|location=Sequence derived from alignment at scaffold367_size194084:7367..10753- (Tigriopus kingsejongensis)
CGCCGGAGGGCTCCGTCACCCTGAGCCTGGCCAACGTTGATCATCGAGCA TCGCGATTCCCGACCGGAACAACCCACTCCGGAATTGGGCGGGCATCGGG TTTTATGCGGATCCCAGGCGGGCAAATTGAGGCCCAGCGTGCGCTAGTTT GAGCTTCATCATGTCCGGATTGCCCACCATCACGCAATTGCGCGCCCTCC GCGTGGTGGATCTCAAGGAGCGACTCGTCGAGCTGGACCTCAGCACCCAA GGTGAGACTGGCCACCCACTCGCTGGCTTGGGTGAGCGACGAGGCCCGGA ACTGAACTCACGCCCCCGGGTCTGATCCTTTTTTCAGGCTTGAAAGCCGA TCTCATCAATCGCCTGCATGAGTACTTCAACATTCAGCGCGAGGGCGCCC GCGAGGCCCGGCTCGAGGCTGAGGCCGCCGCTGCGGCCGCGGCTCCTCCG CCGGTTGGGGAGCCTGTGGTCGTGCCCGAGGCCACTGATCCCGAGGTCGT GCCTGAGCCCGAGGTCGTGCCTGAGCCCGAGGCCACTGAGGCCGCGCCCG AGATCCCTGCAGCCGTGCCCGAGGCCCCTGAGGCCGTGCCCGAGGCCGCT GAGATAGTACCGGTGGTCGAAGCCTCGCTCGTGGACCAGCCTGCGCCAGC CTCGGAGGTCACGGCCCATATGGCGGCCGCCACGCATACCGTGGCCACCA CGCCCAGCCCGCAGGTGGAGGCCCAGCCGCACGAGTCCACGGCTCTGGCG CAGACGTACCCCGAGCCACCCACTCCCGCCACTCCCGCCACTCCCGAGGC GCCCGTCGTGGTCGAGCTGCCGGTGGTTGAGCCGCCCCCAACCACGGCCC CAGCCATTCCCACGGCTCAACCCGAAGAGTCGGCCACGACCGTGGTTCCG CCGCAAGACACTCAAGTGACCGAGCCGGAGCCCGAAGTGCGGGCGCTCGC GAGTCCGCCAACCACCGCTGAGCTGCCTCCAACCAGCCCCGCCGTTGAGC CCGAAGCTGCTCCGATGGAGATCCCCAGCCCCGAGACCCCATCCGGGGCG GACGTCACTCGGTCACCGGCAGCGGCCATCACCTCAGCCCCTCCACTGAG CTCTGGCCAGTTGAGGGCCGAGTCGCCGGTCCCCGAGCCCATGGACGAGG ACTTGCCCCCGGGCACCACGCCTGAGCCCAAGCCCAGCCTGGCCCGGATC GTGATCCCGTCCACGGCGGTCATCAAGGAATCGCCGGCTCTCATCCGCCA GCCGCCGGTGGCCTCGGCCTACGGCGCCTCCGACGACCTCGAGGACGAGG CCACGCCGGCCGGTCCTCAGGCCCCCGTACCCCTCATGTCCCTCAACGTC CACCGACCCCCCCCGACCTATGAGGGTCAGGAGCCGAGTGGCGACGAGCC CGAACCCATGACCAATGTGGCCATTCCCAAGGCCCTCGAGGAGGCCCTGG CCTACAAGCATGAGCGAGCCATGCAGGTGGGCGTCAATCCCGCGGACATT GAGCGCGTCGAGAGCGAGGGCATCGCCGATCAGGCTCAGCCCGCCCGACT GCCCACTTTCCGCCCGCAAACCGTGACCGATCCCAATCCCACGCCCCTGG TGGACGATCCCGAGCTGGACGAGCGGAGCGATCGGGGCAAGCGCCACAAG CGCAAGAAGAAGCGCAAGAAGAACCGCCCGGAGGAGTGGGCCCGCCAAGC GGCCGAGGCCGAGCGGAAGAAGAAGGAGGAGGACGAGAAGCCCAGCGAGC CCGAGGTCGAGATCGAGTATGTGCCCGAGAAGGTGGAGCTGGACATGGCC GATCCCATGTACCGGACGTTTGCCAAGATCTTCGACGCCTTCAAGATCCA GGAGGAGGAGCCCGAGGACCAGAGCGAGGTCCCGCCCCAGGAGGACATCA AGCGGGAGGAACTCAACAAGGTGCCCAAGCTGCTCGAGGAGGACGACCTC ATCGAGCCCCGAGACGCGGACGACGACGACCAGCCCAAGATCTCCAAGCG GAAGATGAAGAAGCTCAATCGACTCTCGGTGGCCGAGCTCAAGCAATTGG TGCCCCGACCCGACGTGGTCGAGATGCACGACGTCACGGCCCGCGATCCC CGTCTCCTCGTCCACTTGAAGTCCACCCGGAACACGGTCCCCGTGCCTCG GCACTGGTGCTTCAAGCGCAAGTACCTCCAGGGCAAGCGCGGTATCGAGA AACCGCCCTTCGATCTGCCCGACTTCATCAAGAAGACCGGCATCATGGAG ATGAGAGCGGCCCTCCAGGAGAAGGAGGACTCCAAGACCATGAAGACCAA GATGCGCGAGAAGGTCCGCCCCAAGCTGGGTAAGATCGACATCGACTACC AGAAGCTCCACGATGCCTTCTTCAAGTGGCAATCCAAGCCCCGCATGACC ATGCACGGGGACCTGTACTACGAGGGCAAGGAGTTCGAAATCCGCCTCAA GGAGAAGAAGCCCGGGGATCTCACCGACGAACTGCGCACGGCTCTGGGCA TGCCCGTGGGGCCCAATGCCCACAAGGTGCCACCGCCGTGGCTGATTGCC ATGCAGCGCTACGGACCGCCGCCCTCCTACCCCAACCTCAAGATCCCCGG CCTGAATGCGGCCATTCCCGAGAGCTGCTCCTTCGGCTACCATGCAGGCG GCTGGGGCAAGCCCCCCGTGGACGAAGCCGGCAAACCTTTGTACGGCGAC GTGTTCGGCACGGCCGATGCGGCCTTCGACCAATCTGTGCCCGTCGAAGA GATCGACACCGCGCTCTGGGGCGAGCTCGAGTCCGAATCCGAGGAGGAAG AGGAGGAGGAGAGCGAAGAGGAAGACGAGGAGGAGGAAGGGGCCGAGGGA GCCGTGGCCTCCGGGCTCCAAACGCCCGTTGTCGACGCCGGACAAGCCAC ACCCTCAGGCCTGTCCTCGGTGGGTGGCGGTCTGGGCATGGAGACCCCCG AGCAGCTGGTCGACCTCCGCAAGAAGAGGATCGAGGCCGAGATGGAGGGC GGGGAAACGCCCAATCTCTACACCGTCATCCCGGAGAAGCGCAACGAGCG CATCGGCACGAGCATGATGGGCTCCACGCACACCTACGACATCACCAACA AGGGCAGTCAACCCTCGAGCACGGGCAGCAAGGCCCCGGGCTACATCGAC CCGGGCGGCGTCGAGCTGGCTCTCAATCCCGAGGAGGTGGATCTCATGGA CACCGAGGCCATGCAGGCGCGCGCCGAGGCCGCTTTGCGGGCCAAGCAGG CCTCCCTGGCCAAGGAGGACCTCTCCGACATGGTGGCCGAACACGCCGCC AAGCAAACGAGCAAGCGGAAGCGACAGGCGGGTGGCAAGGACGAGGGCAA GAGTGGAGCCAAAAAGTACAAGGAGTTCAAATTTTGA
back to top
Add to Basket